RNA–Protein interactions for RNA: ENST00000510638.1

NFKB1-209, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 628 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-209ENST00000510638 CETPP11597 493 aa10.05□□□□□ -0.8
NFKB1-209ENST00000510638 HMGCS2P54868 508 aa10.05□□□□□ -0.8
NFKB1-209ENST00000510638 HMGN5P82970 282 aaKnown RBP10.05□□□□□ -0.8
NFKB1-209ENST00000510638 SCRN1Q12765 414 aa10.05□□□□□ -0.8
NFKB1-209ENST00000510638 PABPC4Q13310 644 aaKnown RBP eCLIP10.05□□□□□ -0.8
NFKB1-209ENST00000510638 CUL4AQ13619 759 aa10.05□□□□□ -0.8
NFKB1-209ENST00000510638 SH3D19Q5HYK7 790 aa10.05□□□□□ -0.8
NFKB1-209ENST00000510638 KCTD1Q719H9 257 aa10.05□□□□□ -0.8
NFKB1-209ENST00000510638 FAM160B2Q86V87 743 aa10.05□□□□□ -0.8
NFKB1-209ENST00000510638 CHURC1Q8WUH1 139 aa10.05□□□□□ -0.8
NFKB1-209ENST00000510638 INTS4Q96HW7 963 aaKnown RBP10.05□□□□□ -0.8
NFKB1-209ENST00000510638 WNK4Q96J92 1243 aa10.05□□□□□ -0.8
NFKB1-209ENST00000510638 NCOA5Q9HCD5 579 aaKnown RBP10.05□□□□□ -0.8
NFKB1-209ENST00000510638 GPCPD1Q9NPB8 672 aa10.05□□□□□ -0.8
NFKB1-209ENST00000510638 KCNH4Q9UQ05 1017 aa10.05□□□□□ -0.8
NFKB1-209ENST00000510638 SMC3Q9UQE7 1217 aa10.05□□□□□ -0.8
NFKB1-209ENST00000510638 FRMPD2Q68DX3 1309 aaPredicted RBP10.05□□□□□ -0.8
NFKB1-209ENST00000510638 A0A0G2JLL6 359 aaPredicted RBP10.04□□□□□ -0.8
NFKB1-209ENST00000510638 PALM3A6NDB9 673 aaPredicted RBP10.04□□□□□ -0.8
NFKB1-209ENST00000510638 TMEM232C9JQI7 657 aa10.04□□□□□ -0.8
NFKB1-209ENST00000510638 LARGE1O95461 756 aa10.04□□□□□ -0.8
NFKB1-209ENST00000510638 GOLGA8HP0CJ92 632 aa10.04□□□□□ -0.8
NFKB1-209ENST00000510638 VCAM1P19320 739 aa10.04□□□□□ -0.8
NFKB1-209ENST00000510638 SMARCA1P28370 1054 aa10.04□□□□□ -0.8
NFKB1-209ENST00000510638 ADD1P35611 737 aaKnown RBP10.04□□□□□ -0.8
NFKB1-209ENST00000510638 STAT2P52630 851 aa10.04□□□□□ -0.8
NFKB1-209ENST00000510638 SSRP1Q08945 709 aaKnown RBP10.04□□□□□ -0.8
NFKB1-209ENST00000510638 FAM83BQ5T0W9 1011 aa10.04□□□□□ -0.8
NFKB1-209ENST00000510638 SPRYD7Q5W111 196 aa10.04□□□□□ -0.8
NFKB1-209ENST00000510638 GADL1Q6ZQY3 521 aa10.04□□□□□ -0.8
NFKB1-209ENST00000510638 TMTC3Q6ZXV5 915 aa10.04□□□□□ -0.8
NFKB1-209ENST00000510638 PRRT2Q7Z6L0 340 aaPredicted RBP10.04□□□□□ -0.8
NFKB1-209ENST00000510638 FAM184AQ8NB25 1140 aa10.04□□□□□ -0.8
NFKB1-209ENST00000510638 PROCA1Q8NCQ7 364 aaPredicted RBP10.04□□□□□ -0.8
NFKB1-209ENST00000510638 IPO9Q96P70 1041 aaKnown RBP10.04□□□□□ -0.8
NFKB1-209ENST00000510638 TANGO6Q9C0B7 1094 aa10.04□□□□□ -0.8
NFKB1-209ENST00000510638 RPAP3Q9H6T3 665 aaPredicted RBP10.04□□□□□ -0.8
NFKB1-209ENST00000510638 EMILIN3Q9NT22 766 aa10.04□□□□□ -0.8
NFKB1-209ENST00000510638 SEC63Q9UGP8 760 aaKnown RBP10.04□□□□□ -0.8
NFKB1-209ENST00000510638 MAD2L2Q9UI95 211 aa10.04□□□□□ -0.8
NFKB1-209ENST00000510638 FEM1BQ9UK73 627 aa10.04□□□□□ -0.8
NFKB1-209ENST00000510638 CTDP1Q9Y5B0 961 aaPredicted RBP10.04□□□□□ -0.8
NFKB1-209ENST00000510638 PTPDC1A2A3K4 754 aa10.03□□□□□ -0.8
NFKB1-209ENST00000510638 USP17L15C9J2P7 530 aa10.03□□□□□ -0.8
NFKB1-209ENST00000510638 USP17L13C9JLJ4 530 aa10.03□□□□□ -0.8
NFKB1-209ENST00000510638 USP17L11C9JVI0 530 aa10.03□□□□□ -0.8
NFKB1-209ENST00000510638 USP17L18D6R9N7 530 aa10.03□□□□□ -0.8
NFKB1-209ENST00000510638 USP17L22D6RA61 530 aa10.03□□□□□ -0.8
NFKB1-209ENST00000510638 USP17L17D6RBQ6 530 aa10.03□□□□□ -0.8
NFKB1-209ENST00000510638 USP17L19D6RCP7 530 aa10.03□□□□□ -0.8
NFKB1-209ENST00000510638 USP17L20D6RJB6 530 aa10.03□□□□□ -0.8
NFKB1-209ENST00000510638 PLA2G6O60733 806 aa10.03□□□□□ -0.8
NFKB1-209ENST00000510638 FLOT1O75955 427 aa10.03□□□□□ -0.8
NFKB1-209ENST00000510638 PLEKHA8P1O95397 391 aa10.03□□□□□ -0.8
NFKB1-209ENST00000510638 IFNAR1P17181 557 aa10.03□□□□□ -0.8
NFKB1-209ENST00000510638 CDC27P30260 824 aa10.03□□□□□ -0.8
NFKB1-209ENST00000510638 USP17L24Q0WX57 530 aa10.03□□□□□ -0.8
NFKB1-209ENST00000510638 TRAF1Q13077 416 aa10.03□□□□□ -0.8
NFKB1-209ENST00000510638 SYDE2Q5VT97 1194 aa10.03□□□□□ -0.8
NFKB1-209ENST00000510638 RASAL3Q86YV0 1011 aa10.03□□□□□ -0.8
NFKB1-209ENST00000510638 STAG2Q8N3U4 1231 aa10.03□□□□□ -0.8
NFKB1-209ENST00000510638 WASF1Q92558 559 aa10.03□□□□□ -0.8
NFKB1-209ENST00000510638 RRP36Q96EU6 259 aaKnown RBP10.03□□□□□ -0.8
NFKB1-209ENST00000510638 NUP88Q99567 741 aaPredicted RBP10.03□□□□□ -0.8
NFKB1-209ENST00000510638 SLF1Q9BQI6 1058 aa10.03□□□□□ -0.8
NFKB1-209ENST00000510638 SPZ1Q9BXG8 430 aa10.03□□□□□ -0.8
NFKB1-209ENST00000510638 RNF26Q9BY78 433 aaPredicted RBP10.03□□□□□ -0.8
NFKB1-209ENST00000510638 FAM217BQ9NTX9 383 aaPredicted RBP10.03□□□□□ -0.8
NFKB1-209ENST00000510638 CENPFP49454 3210 aa10.03□□□□□ -0.8
NFKB1-209ENST00000510638 HTTP42858 3142 aa10.02□□□□□ -0.8
NFKB1-209ENST00000510638 CCL15-CCL14A0A0B4J2E2 113 aa10.02□□□□□ -0.81
NFKB1-209ENST00000510638 MANSC4A6NHS7 340 aaPredicted RBP10.02□□□□□ -0.81
NFKB1-209ENST00000510638 DEXIO95424 95 aa10.02□□□□□ -0.81
NFKB1-209ENST00000510638 FMNL1O95466 1100 aaPredicted RBP10.02□□□□□ -0.81
NFKB1-209ENST00000510638 SLC10A3P09131 477 aa10.02□□□□□ -0.81
NFKB1-209ENST00000510638 FDX1P10109 184 aa10.02□□□□□ -0.81
NFKB1-209ENST00000510638 XBP1P17861 261 aa10.02□□□□□ -0.81
NFKB1-209ENST00000510638 PDCP20941 246 aa10.02□□□□□ -0.81
NFKB1-209ENST00000510638 OSBPP22059 807 aa10.02□□□□□ -0.81
NFKB1-209ENST00000510638 INHBEP58166 350 aa10.02□□□□□ -0.81
NFKB1-209ENST00000510638 IRX3P78415 501 aaPredicted RBP10.02□□□□□ -0.81
NFKB1-209ENST00000510638 SREBF2Q12772 1141 aa10.02□□□□□ -0.81
NFKB1-209ENST00000510638 MKRN3Q13064 507 aaKnown RBP10.02□□□□□ -0.81
NFKB1-209ENST00000510638 CCL15Q16663 113 aa10.02□□□□□ -0.81
NFKB1-209ENST00000510638 BTNL9Q6UXG8 535 aa10.02□□□□□ -0.81
NFKB1-209ENST00000510638 CCDC82Q8N4S0 544 aa10.02□□□□□ -0.81
NFKB1-209ENST00000510638 PRPF38AQ8NAV1 312 aaKnown RBP10.02□□□□□ -0.81
NFKB1-209ENST00000510638 NSUN7Q8NE18 718 aaKnown RBP10.02□□□□□ -0.81
NFKB1-209ENST00000510638 KIFC2Q96AC6 838 aa10.02□□□□□ -0.81
NFKB1-209ENST00000510638 SLC26A6Q9BXS9 759 aa10.02□□□□□ -0.81
NFKB1-209ENST00000510638 CWC22Q9HCG8 908 aaKnown RBP10.02□□□□□ -0.81
NFKB1-209ENST00000510638 VAT1LQ9HCJ6 419 aa10.02□□□□□ -0.81
NFKB1-209ENST00000510638 HOXC10Q9NYD6 342 aa10.02□□□□□ -0.81
NFKB1-209ENST00000510638 PNMA3Q9UL41 463 aa10.02□□□□□ -0.81
NFKB1-209ENST00000510638 PNMA2Q9UL42 364 aa10.02□□□□□ -0.81
NFKB1-209ENST00000510638 AGTPBP1Q9UPW5 1226 aa10.02□□□□□ -0.81
NFKB1-209ENST00000510638 RANBP2P49792 3224 aaKnown RBP10.02□□□□□ -0.81
NFKB1-209ENST00000510638 MYPNQ86TC9 1320 aa10.02□□□□□ -0.81
NFKB1-209ENST00000510638 STK36Q9NRP7 1315 aa10.02□□□□□ -0.81
NFKB1-209ENST00000510638 PRPF3O43395 683 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms