RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 GRAMD1AQ96CP6 724 aa9.15□□□□□ -0.94
HTT-208ENST00000510626 INTS9Q9NV88 658 aaKnown RBP9.15□□□□□ -0.94
HTT-208ENST00000510626 HARSP12081 509 aaKnown RBP9.15□□□□□ -0.94
HTT-208ENST00000510626 RRAGAQ7L523 313 aa9.15□□□□□ -0.94
HTT-208ENST00000510626 CFAP61Q8NHU2 1237 aa9.15□□□□□ -0.94
HTT-208ENST00000510626 TMEM60Q9H2L4 133 aa9.15□□□□□ -0.94
HTT-208ENST00000510626 VIRMAQ69YN4 1812 aaKnown RBP9.15□□□□□ -0.94
HTT-208ENST00000510626 GOLGA8TH3BQL2 631 aa9.15□□□□□ -0.94
HTT-208ENST00000510626 GOLGA8HP0CJ92 632 aa9.15□□□□□ -0.94
HTT-208ENST00000510626 MRPS35P82673 323 aaKnown RBP9.15□□□□□ -0.94
HTT-208ENST00000510626 SATB1Q01826 763 aa9.15□□□□□ -0.94
HTT-208ENST00000510626 SYCP2LQ5T4T6 812 aa9.15□□□□□ -0.94
HTT-208ENST00000510626 CHPF2Q9P2E5 772 aa9.15□□□□□ -0.94
HTT-208ENST00000510626 CTAGE3PQ8IX95 158 aa9.15□□□□□ -0.94
HTT-208ENST00000510626 PFKFB2O60825 505 aa9.15□□□□□ -0.94
HTT-208ENST00000510626 GARSP41250 739 aaKnown RBP9.15□□□□□ -0.94
HTT-208ENST00000510626 USP6NLQ92738 828 aa9.15□□□□□ -0.94
HTT-208ENST00000510626 SLF1Q9BQI6 1058 aa9.15□□□□□ -0.94
HTT-208ENST00000510626 SNX14Q9Y5W7 946 aa9.15□□□□□ -0.94
HTT-208ENST00000510626 IGSF3O75054 1194 aa9.15□□□□□ -0.94
HTT-208ENST00000510626 CDKL2Q92772 493 aa9.15□□□□□ -0.94
HTT-208ENST00000510626 FRMD3A2A2Y4 597 aa9.15□□□□□ -0.94
HTT-208ENST00000510626 HNRNPRO43390 633 aaKnown RBP9.15□□□□□ -0.94
HTT-208ENST00000510626 PDE4DQ08499 809 aa9.15□□□□□ -0.94
HTT-208ENST00000510626 PDE1CQ14123 709 aaPredicted RBP9.15□□□□□ -0.94
HTT-208ENST00000510626 CDC37Q16543 378 aaPredicted RBP9.15□□□□□ -0.94
HTT-208ENST00000510626 AK8Q96MA6 479 aa9.15□□□□□ -0.94
HTT-208ENST00000510626 ZSWIM6Q9HCJ5 1215 aa9.15□□□□□ -0.94
HTT-208ENST00000510626 SENP1Q9P0U3 644 aa9.15□□□□□ -0.94
HTT-208ENST00000510626 LAMC3Q9Y6N6 1575 aa9.15□□□□□ -0.94
HTT-208ENST00000510626 RSAD2Q8WXG1 361 aa9.15□□□□□ -0.95
HTT-208ENST00000510626 LARP6Q9BRS8 491 aaKnown RBP9.15□□□□□ -0.95
HTT-208ENST00000510626 VPS37BQ9H9H4 285 aa9.15□□□□□ -0.95
HTT-208ENST00000510626 KIF9Q9HAQ2 790 aa9.15□□□□□ -0.95
HTT-208ENST00000510626 GEN1Q17RS7 908 aa9.15□□□□□ -0.95
HTT-208ENST00000510626 MYSM1Q5VVJ2 828 aa9.15□□□□□ -0.95
HTT-208ENST00000510626 PDXDC1Q6P996 788 aa9.15□□□□□ -0.95
HTT-208ENST00000510626 MYO10Q9HD67 2058 aa9.15□□□□□ -0.95
HTT-208ENST00000510626 TXNDC9O14530 226 aa9.15□□□□□ -0.95
HTT-208ENST00000510626 CRYMQ14894 314 aa9.15□□□□□ -0.95
HTT-208ENST00000510626 C2CD5Q86YS7 1000 aa9.14□□□□□ -0.95
HTT-208ENST00000510626 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.14□□□□□ -0.95
HTT-208ENST00000510626 E7ENQ6 273 aa9.14□□□□□ -0.95
HTT-208ENST00000510626 ARHGEF9O43307 516 aa9.14□□□□□ -0.95
HTT-208ENST00000510626 GUCY2CP25092 1073 aa9.14□□□□□ -0.95
HTT-208ENST00000510626 NDUFA13Q9P0J0 144 aa9.14□□□□□ -0.95
HTT-208ENST00000510626 ANGPTL3Q9Y5C1 460 aa9.14□□□□□ -0.95
HTT-208ENST00000510626 PPP1R12AO14974 1030 aaPredicted RBP9.14□□□□□ -0.95
HTT-208ENST00000510626 KPNB1Q14974 876 aaKnown RBP9.14□□□□□ -0.95
HTT-208ENST00000510626 CALCRLQ16602 461 aa9.14□□□□□ -0.95
HTT-208ENST00000510626 TYW1BQ6NUM6 668 aa9.14□□□□□ -0.95
HTT-208ENST00000510626 NME9Q86XW9 330 aa9.14□□□□□ -0.95
HTT-208ENST00000510626 NSMCE1Q8WV22 266 aa9.14□□□□□ -0.95
HTT-208ENST00000510626 APPBP2Q92624 585 aa9.14□□□□□ -0.95
HTT-208ENST00000510626 FOXP1Q9H334 677 aaPredicted RBP9.14□□□□□ -0.95
HTT-208ENST00000510626 CDK13Q14004 1512 aaKnown RBP9.14□□□□□ -0.95
HTT-208ENST00000510626 ZMYM6O95789 1325 aa9.14□□□□□ -0.95
HTT-208ENST00000510626 RIMS2Q9UQ26 1411 aa9.14□□□□□ -0.95
HTT-208ENST00000510626 PGRMC1O00264 195 aaKnown RBP9.14□□□□□ -0.95
HTT-208ENST00000510626 SERPINB6P35237 376 aa9.14□□□□□ -0.95
HTT-208ENST00000510626 KDM5BQ9UGL1 1544 aa9.14□□□□□ -0.95
HTT-208ENST00000510626 DNMT1P26358 1616 aaKnown RBP9.14□□□□□ -0.95
HTT-208ENST00000510626 PALM2Q8IXS6 379 aa9.14□□□□□ -0.95
HTT-208ENST00000510626 IL1RAPL1Q9NZN1 696 aa9.14□□□□□ -0.95
HTT-208ENST00000510626 DENND2AQ9ULE3 1009 aa9.14□□□□□ -0.95
HTT-208ENST00000510626 DDAH1O94760 285 aa9.14□□□□□ -0.95
HTT-208ENST00000510626 ANXA13P27216 316 aa9.14□□□□□ -0.95
HTT-208ENST00000510626 ADCY8P40145 1251 aa9.14□□□□□ -0.95
HTT-208ENST00000510626 TNNI2P48788 182 aa9.14□□□□□ -0.95
HTT-208ENST00000510626 TSHZ3Q63HK5 1081 aa9.14□□□□□ -0.95
HTT-208ENST00000510626 FAM8A1Q9UBU6 413 aa9.14□□□□□ -0.95
HTT-208ENST00000510626 NR1D1P20393 614 aa9.14□□□□□ -0.95
HTT-208ENST00000510626 HACD3Q9P035 362 aa9.14□□□□□ -0.95
HTT-208ENST00000510626 UAP1Q16222 522 aaPredicted RBP9.14□□□□□ -0.95
HTT-208ENST00000510626 MORC2Q9Y6X9 1032 aaPredicted RBP9.14□□□□□ -0.95
HTT-208ENST00000510626 ANO9A1A5B4 782 aa9.14□□□□□ -0.95
HTT-208ENST00000510626 TTC25Q96NG3 672 aa9.14□□□□□ -0.95
HTT-208ENST00000510626 NOS1P29475 1434 aa9.14□□□□□ -0.95
HTT-208ENST00000510626 TRPC6Q9Y210 931 aa9.14□□□□□ -0.95
HTT-208ENST00000510626 INPP1P49441 399 aa9.14□□□□□ -0.95
HTT-208ENST00000510626 KLHL7Q8IXQ5 586 aa9.14□□□□□ -0.95
HTT-208ENST00000510626 MAGEB6Q8N7X4 407 aa9.14□□□□□ -0.95
HTT-208ENST00000510626 TAB2Q9NYJ8 693 aa9.14□□□□□ -0.95
HTT-208ENST00000510626 KLHL29Q96CT2 875 aa9.13□□□□□ -0.95
HTT-208ENST00000510626 ANTXR1Q9H6X2 564 aa9.13□□□□□ -0.95
HTT-208ENST00000510626 SERPINB4P48594 390 aa9.13□□□□□ -0.95
HTT-208ENST00000510626 ATG16L1Q676U5 607 aa9.13□□□□□ -0.95
HTT-208ENST00000510626 KBTBD3Q8NAB2 608 aa9.13□□□□□ -0.95
HTT-208ENST00000510626 ABCF3Q9NUQ8 709 aa9.13□□□□□ -0.95
HTT-208ENST00000510626 ARHGEF11O15085 1522 aa9.13□□□□□ -0.95
HTT-208ENST00000510626 NNTQ13423 1086 aa9.13□□□□□ -0.95
HTT-208ENST00000510626 DYTNA2CJ06 578 aa9.13□□□□□ -0.95
HTT-208ENST00000510626 ZNF280CQ8ND82 737 aa9.13□□□□□ -0.95
HTT-208ENST00000510626 LRRC2Q9BYS8 371 aa9.13□□□□□ -0.95
HTT-208ENST00000510626 SH3BP5O60239 455 aa9.13□□□□□ -0.95
HTT-208ENST00000510626 AOC3Q16853 763 aa9.13□□□□□ -0.95
HTT-208ENST00000510626 KLHDC4Q8TBB5 520 aa9.13□□□□□ -0.95
HTT-208ENST00000510626 SPINK5Q9NQ38 1064 aaPredicted RBP9.13□□□□□ -0.95
HTT-208ENST00000510626 PHEXP78562 749 aa9.13□□□□□ -0.95
HTT-208ENST00000510626 RINT1Q6NUQ1 792 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms