RNA–Protein interactions for RNA: ENST00000509828.1

MBD4-208, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-208ENST00000509828 CPXCR1Q8N123 301 aa12.44□□□□□ -0.42
MBD4-208ENST00000509828 ANKRD35Q8N283 1001 aa12.44□□□□□ -0.42
MBD4-208ENST00000509828 MSL3Q8N5Y2 521 aaKnown RBP12.44□□□□□ -0.42
MBD4-208ENST00000509828 RHPN1Q8TCX5 695 aa12.44□□□□□ -0.42
MBD4-208ENST00000509828 TEX13BQ9BXU2 312 aa12.44□□□□□ -0.42
MBD4-208ENST00000509828 PPP1R12CQ9BZL4 782 aa12.44□□□□□ -0.42
MBD4-208ENST00000509828 ISY1Q9ULR0 285 aaKnown RBP12.44□□□□□ -0.42
MBD4-208ENST00000509828 SLC4A4Q9Y6R1 1079 aa12.44□□□□□ -0.42
MBD4-208ENST00000509828 DNAH12Q6ZR08 3092 aa12.44□□□□□ -0.42
MBD4-208ENST00000509828 RLFQ13129 1914 aa12.44□□□□□ -0.42
MBD4-208ENST00000509828 ELP1O95163 1332 aa12.43□□□□□ -0.42
MBD4-208ENST00000509828 A0A0U1RQG5 324 aaPredicted RBP12.43□□□□□ -0.42
MBD4-208ENST00000509828 DUSP11O75319 330 aaKnown RBP12.43□□□□□ -0.42
MBD4-208ENST00000509828 CSF2RAP15509 400 aa12.43□□□□□ -0.42
MBD4-208ENST00000509828 PBX2P40425 430 aa12.43□□□□□ -0.42
MBD4-208ENST00000509828 RAB30Q15771 203 aa12.43□□□□□ -0.42
MBD4-208ENST00000509828 C12orf60Q5U649 245 aa12.43□□□□□ -0.42
MBD4-208ENST00000509828 CEP85Q6P2H3 762 aa12.43□□□□□ -0.42
MBD4-208ENST00000509828 PSRC1Q6PGN9 363 aaPredicted RBP12.43□□□□□ -0.42
MBD4-208ENST00000509828 ZNF365Q70YC5 407 aa12.43□□□□□ -0.42
MBD4-208ENST00000509828 STK11IPQ8N1F8 1099 aa12.43□□□□□ -0.42
MBD4-208ENST00000509828 ASB2Q96Q27 587 aa12.43□□□□□ -0.42
MBD4-208ENST00000509828 SLF1Q9BQI6 1058 aa12.43□□□□□ -0.42
MBD4-208ENST00000509828 PBX4Q9BYU1 374 aa12.43□□□□□ -0.42
MBD4-208ENST00000509828 SLC28A3Q9HAS3 691 aa12.43□□□□□ -0.42
MBD4-208ENST00000509828 MKNK2Q9HBH9 465 aa12.43□□□□□ -0.42
MBD4-208ENST00000509828 PAG1Q9NWQ8 432 aa12.43□□□□□ -0.42
MBD4-208ENST00000509828 ADAMTS5Q9UNA0 930 aa12.43□□□□□ -0.42
MBD4-208ENST00000509828 ZNF236Q9UL36 1845 aa12.43□□□□□ -0.42
MBD4-208ENST00000509828 SYNGAP1Q96PV0 1343 aa12.42□□□□□ -0.42
MBD4-208ENST00000509828 ARVCFO00192 962 aa12.42□□□□□ -0.42
MBD4-208ENST00000509828 FGBP02675 491 aa12.42□□□□□ -0.42
MBD4-208ENST00000509828 ASGR1P07306 291 aa12.42□□□□□ -0.42
MBD4-208ENST00000509828 ACVR2BQ13705 512 aa12.42□□□□□ -0.42
MBD4-208ENST00000509828 TMEM240Q5SV17 173 aa12.42□□□□□ -0.42
MBD4-208ENST00000509828 AKNAD1Q5T1N1 836 aa12.42□□□□□ -0.42
MBD4-208ENST00000509828 C16orf86Q6ZW13 317 aa12.42□□□□□ -0.42
MBD4-208ENST00000509828 MICALL1Q8N3F8 863 aa12.42□□□□□ -0.42
MBD4-208ENST00000509828 PRPF38AQ8NAV1 312 aaKnown RBP12.42□□□□□ -0.42
MBD4-208ENST00000509828 ADAMTS19Q8TE59 1207 aa12.42□□□□□ -0.42
MBD4-208ENST00000509828 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.42□□□□□ -0.42
MBD4-208ENST00000509828 KIF1BPQ96EK5 621 aa12.42□□□□□ -0.42
MBD4-208ENST00000509828 NUP88Q99567 741 aaPredicted RBP12.42□□□□□ -0.42
MBD4-208ENST00000509828 BOLA2Q9H3K6 86 aa12.42□□□□□ -0.42
MBD4-208ENST00000509828 TBX21Q9UL17 535 aa12.42□□□□□ -0.42
MBD4-208ENST00000509828 ZNF214Q9UL59 606 aaPredicted RBP12.42□□□□□ -0.42
MBD4-208ENST00000509828 MYO5AQ9Y4I1 1855 aaKnown RBP12.42□□□□□ -0.42
MBD4-208ENST00000509828 TCRBV5S4A2TA0A5A2 114 aa12.41□□□□□ -0.42
MBD4-208ENST00000509828 HMMRO75330 724 aa12.41□□□□□ -0.42
MBD4-208ENST00000509828 SNAI1O95863 264 aaPredicted RBP12.41□□□□□ -0.42
MBD4-208ENST00000509828 CYP2C18P33260 490 aa12.41□□□□□ -0.42
MBD4-208ENST00000509828 SKIV2LQ15477 1246 aaKnown RBP12.41□□□□□ -0.42
MBD4-208ENST00000509828 CCDC144BQ3MJ40 725 aa12.41□□□□□ -0.42
MBD4-208ENST00000509828 ZSCAN25Q6NSZ9 544 aa12.41□□□□□ -0.42
MBD4-208ENST00000509828 KLHDC9Q8NEP7 349 aa12.41□□□□□ -0.42
MBD4-208ENST00000509828 KIFC2Q96AC6 838 aa12.41□□□□□ -0.42
MBD4-208ENST00000509828 UHRF1Q96T88 793 aaPredicted RBP12.41□□□□□ -0.42
MBD4-208ENST00000509828 ABHD16BQ9H3Z7 469 aa12.41□□□□□ -0.42
MBD4-208ENST00000509828 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.41□□□□□ -0.42
MBD4-208ENST00000509828 FBXO40Q9UH90 709 aa12.41□□□□□ -0.42
MBD4-208ENST00000509828 MYADML2A6NDP7 307 aa12.4□□□□□ -0.42
MBD4-208ENST00000509828 F5H6K3 240 aa12.4□□□□□ -0.42
MBD4-208ENST00000509828 ADD2P35612 726 aa12.4□□□□□ -0.42
MBD4-208ENST00000509828 KLRC3Q07444 240 aa12.4□□□□□ -0.42
MBD4-208ENST00000509828 SLFNL1Q499Z3 407 aa12.4□□□□□ -0.42
MBD4-208ENST00000509828 MAMDC4Q6UXC1 1216 aa12.4□□□□□ -0.42
MBD4-208ENST00000509828 C16orf59Q7L2K0 433 aa12.4□□□□□ -0.42
MBD4-208ENST00000509828 FAM122AQ96E09 287 aa12.4□□□□□ -0.42
MBD4-208ENST00000509828 AP5M1Q9H0R1 490 aa12.4□□□□□ -0.42
MBD4-208ENST00000509828 NKX2-4Q9H2Z4 354 aa12.4□□□□□ -0.42
MBD4-208ENST00000509828 RAVER2Q9HCJ3 691 aaKnown RBP12.4□□□□□ -0.42
MBD4-208ENST00000509828 IL23AQ9NPF7 189 aa12.4□□□□□ -0.42
MBD4-208ENST00000509828 CLIP2Q9UDT6 1046 aa12.4□□□□□ -0.42
MBD4-208ENST00000509828 ROBO3Q96MS0 1386 aa12.4□□□□□ -0.42
MBD4-208ENST00000509828 ZBBXA8MT70 800 aa12.39□□□□□ -0.43
MBD4-208ENST00000509828 MINDY4BA8MYZ0 360 aa12.39□□□□□ -0.43
MBD4-208ENST00000509828 CCER2I3L3R5 266 aa12.39□□□□□ -0.43
MBD4-208ENST00000509828 SMIM22K7EJ46 135 aa12.39□□□□□ -0.43
MBD4-208ENST00000509828 ZEB2O60315 1214 aa12.39□□□□□ -0.43
MBD4-208ENST00000509828 RLBP1P12271 317 aa12.39□□□□□ -0.43
MBD4-208ENST00000509828 CST5P28325 142 aaPredicted RBP12.39□□□□□ -0.43
MBD4-208ENST00000509828 CDK7P50613 346 aa12.39□□□□□ -0.43
MBD4-208ENST00000509828 GJA9P57773 515 aa12.39□□□□□ -0.43
MBD4-208ENST00000509828 IKQ13123 557 aaPredicted RBP12.39□□□□□ -0.43
MBD4-208ENST00000509828 CTR9Q6PD62 1173 aa12.39□□□□□ -0.43
MBD4-208ENST00000509828 OTOP2Q7RTS6 562 aa12.39□□□□□ -0.43
MBD4-208ENST00000509828 ZNF467Q7Z7K2 595 aaPredicted RBP12.39□□□□□ -0.43
MBD4-208ENST00000509828 ZNF444Q8N0Y2 327 aaPredicted RBP12.39□□□□□ -0.43
MBD4-208ENST00000509828 HIPK3Q9H422 1215 aa12.39□□□□□ -0.43
MBD4-208ENST00000509828 HOMER2Q9NSB8 354 aa12.39□□□□□ -0.43
MBD4-208ENST00000509828 ARPP21Q9UBL0 812 aaPredicted RBP12.39□□□□□ -0.43
MBD4-208ENST00000509828 RAPGEFL1Q9UHV5 662 aa12.39□□□□□ -0.43
MBD4-208ENST00000509828 RIPK3Q9Y572 518 aa12.39□□□□□ -0.43
MBD4-208ENST00000509828 LAMA2P24043 3122 aaKnown RBP12.38□□□□□ -0.43
MBD4-208ENST00000509828 NAV1Q8NEY1 1877 aa12.38□□□□□ -0.43
MBD4-208ENST00000509828 RAB11FIP3O75154 756 aa12.38□□□□□ -0.43
MBD4-208ENST00000509828 NDUFB10O96000 172 aa12.38□□□□□ -0.43
MBD4-208ENST00000509828 IRX5P78411 483 aaPredicted RBP12.38□□□□□ -0.43
MBD4-208ENST00000509828 BEX3Q00994 111 aa12.38□□□□□ -0.43
MBD4-208ENST00000509828 TNFAIP2Q03169 654 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms