RNA–Protein interactions for RNA: ENST00000509639.5

DDR1-265, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 615 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-265ENST00000509639 IFIT3O14879 490 aaKnown RBP23.29■■□□□ 1.32
DDR1-265ENST00000509639 ADCY3O60266 1144 aa23.29■■□□□ 1.32
DDR1-265ENST00000509639 ERCC3P19447 782 aa23.29■■□□□ 1.32
DDR1-265ENST00000509639 STAT3P40763 770 aa23.29■■□□□ 1.32
DDR1-265ENST00000509639 IFFO2Q5TF58 517 aa23.29■■□□□ 1.32
DDR1-265ENST00000509639 RIOX2Q8IUF8 465 aa23.29■■□□□ 1.32
DDR1-265ENST00000509639 MB21D2Q8IYB1 491 aaPredicted RBP23.29■■□□□ 1.32
DDR1-265ENST00000509639 REPS2Q8NFH8 660 aa23.29■■□□□ 1.32
DDR1-265ENST00000509639 TEX13BQ9BXU2 312 aa23.29■■□□□ 1.32
DDR1-265ENST00000509639 SLC38A10Q9HBR0 1119 aa23.29■■□□□ 1.32
DDR1-265ENST00000509639 GJD2Q9UKL4 321 aa23.29■■□□□ 1.32
DDR1-265ENST00000509639 ZNF214Q9UL59 606 aaPredicted RBP23.29■■□□□ 1.32
DDR1-265ENST00000509639 FRMPD2Q68DX3 1309 aaPredicted RBP23.29■■□□□ 1.32
DDR1-265ENST00000509639 SNHG28P0DPA3 235 aa23.28■■□□□ 1.32
DDR1-265ENST00000509639 ZKSCAN1P17029 563 aaPredicted RBP23.28■■□□□ 1.32
DDR1-265ENST00000509639 RGS2P41220 211 aa23.28■■□□□ 1.32
DDR1-265ENST00000509639 PXYLP1Q8TE99 480 aa23.28■■□□□ 1.32
DDR1-265ENST00000509639 SH3TC2Q8TF17 1288 aa23.28■■□□□ 1.32
DDR1-265ENST00000509639 SLC15A5A6NIM6 579 aa23.27■■□□□ 1.32
DDR1-265ENST00000509639 ATP2A1O14983 1001 aa23.27■■□□□ 1.32
DDR1-265ENST00000509639 PTPREP23469 700 aa23.27■■□□□ 1.32
DDR1-265ENST00000509639 OAZ1P54368 228 aa23.27■■□□□ 1.32
DDR1-265ENST00000509639 ZNF543Q08ER8 600 aa23.27■■□□□ 1.32
DDR1-265ENST00000509639 WTAPQ15007 396 aa23.27■■□□□ 1.32
DDR1-265ENST00000509639 SEC23AQ15436 765 aa23.27■■□□□ 1.32
DDR1-265ENST00000509639 MORN1Q5T089 497 aa23.27■■□□□ 1.32
DDR1-265ENST00000509639 GPATCH4Q5T3I0 446 aaKnown RBP23.27■■□□□ 1.32
DDR1-265ENST00000509639 SNRNP48Q6IEG0 339 aaKnown RBP23.27■■□□□ 1.32
DDR1-265ENST00000509639 CPXCR1Q8N123 301 aa23.27■■□□□ 1.32
DDR1-265ENST00000509639 ZNF333Q96JL9 665 aa23.27■■□□□ 1.32
DDR1-265ENST00000509639 GPCPD1Q9NPB8 672 aa23.27■■□□□ 1.32
DDR1-265ENST00000509639 BIN2Q9UBW5 565 aaPredicted RBP23.27■■□□□ 1.32
DDR1-265ENST00000509639 DOCK3Q8IZD9 2030 aa23.26■■□□□ 1.31
DDR1-265ENST00000509639 PLXNB2O15031 1838 aa23.26■■□□□ 1.31
DDR1-265ENST00000509639 STRNO43815 780 aa23.26■■□□□ 1.31
DDR1-265ENST00000509639 CYP2B6P20813 491 aa23.26■■□□□ 1.31
DDR1-265ENST00000509639 MCM5P33992 734 aa23.26■■□□□ 1.31
DDR1-265ENST00000509639 UBXN2AP68543 259 aa23.26■■□□□ 1.31
DDR1-265ENST00000509639 GRB14Q14449 540 aa23.26■■□□□ 1.31
DDR1-265ENST00000509639 BTNL9Q6UXG8 535 aa23.26■■□□□ 1.31
DDR1-265ENST00000509639 APBA2Q99767 749 aa23.26■■□□□ 1.31
DDR1-265ENST00000509639 MTA3Q9BTC8 594 aa23.26■■□□□ 1.31
DDR1-265ENST00000509639 PRR12Q9ULL5 1215 aa23.26■■□□□ 1.31
DDR1-265ENST00000509639 ZNF236Q9UL36 1845 aa23.26■■□□□ 1.31
DDR1-265ENST00000509639 ANTXR2P58335 489 aa23.25■■□□□ 1.31
DDR1-265ENST00000509639 MAP2K5Q13163 448 aa23.25■■□□□ 1.31
DDR1-265ENST00000509639 KRT32Q14532 448 aa23.25■■□□□ 1.31
DDR1-265ENST00000509639 ASPRV1Q53RT3 343 aa23.25■■□□□ 1.31
DDR1-265ENST00000509639 TMEM67Q5HYA8 995 aa23.25■■□□□ 1.31
DDR1-265ENST00000509639 SYDE2Q5VT97 1194 aa23.25■■□□□ 1.31
DDR1-265ENST00000509639 CHST3Q7LGC8 479 aa23.25■■□□□ 1.31
DDR1-265ENST00000509639 TRMT44Q8IYL2 757 aaKnown RBP23.25■■□□□ 1.31
DDR1-265ENST00000509639 RAVER2Q9HCJ3 691 aaKnown RBP23.25■■□□□ 1.31
DDR1-265ENST00000509639 EPB41L2O43491 1005 aaKnown RBP23.24■■□□□ 1.31
DDR1-265ENST00000509639 PRC1O43663 620 aa23.24■■□□□ 1.31
DDR1-265ENST00000509639 FCER1AP12319 257 aa23.24■■□□□ 1.31
DDR1-265ENST00000509639 XRCC5P13010 732 aaKnown RBP23.24■■□□□ 1.31
DDR1-265ENST00000509639 ELNP15502 786 aa23.24■■□□□ 1.31
DDR1-265ENST00000509639 SLC16A2P36021 539 aa23.24■■□□□ 1.31
DDR1-265ENST00000509639 TTBK2Q6IQ55 1244 aa23.24■■□□□ 1.31
DDR1-265ENST00000509639 ABRAQ8N0Z2 381 aa23.24■■□□□ 1.31
DDR1-265ENST00000509639 USP6NLQ92738 828 aa23.24■■□□□ 1.31
DDR1-265ENST00000509639 HTTP42858 3142 aa23.23■■□□□ 1.31
DDR1-265ENST00000509639 PARP1P09874 1014 aaKnown RBP23.23■■□□□ 1.31
DDR1-265ENST00000509639 SLC4A3P48751 1232 aa23.23■■□□□ 1.31
DDR1-265ENST00000509639 TSGA10IPQ3SY00 556 aa23.23■■□□□ 1.31
DDR1-265ENST00000509639 TMEM87BQ96K49 555 aa23.23■■□□□ 1.31
DDR1-265ENST00000509639 NEK1Q96PY6 1258 aa23.23■■□□□ 1.31
DDR1-265ENST00000509639 MMP19Q99542 508 aa23.23■■□□□ 1.31
DDR1-265ENST00000509639 HMGCRP04035 888 aa23.22■■□□□ 1.31
DDR1-265ENST00000509639 GOLGA8HP0CJ92 632 aa23.22■■□□□ 1.31
DDR1-265ENST00000509639 ADORA2AP29274 412 aa23.22■■□□□ 1.31
DDR1-265ENST00000509639 HSPA4P34932 840 aa23.22■■□□□ 1.31
DDR1-265ENST00000509639 KCTD2Q14681 263 aa23.22■■□□□ 1.31
DDR1-265ENST00000509639 CCDC174Q6PII3 467 aa23.22■■□□□ 1.31
DDR1-265ENST00000509639 DPP9Q86TI2 863 aa23.22■■□□□ 1.31
DDR1-265ENST00000509639 TMEM106CQ9BVX2 250 aa23.22■■□□□ 1.31
DDR1-265ENST00000509639 RANBP17Q9H2T7 1088 aaKnown RBP23.22■■□□□ 1.31
DDR1-265ENST00000509639 SLC5A4Q9NY91 659 aa23.22■■□□□ 1.31
DDR1-265ENST00000509639 FBXO40Q9UH90 709 aa23.22■■□□□ 1.31
DDR1-265ENST00000509639 INHAP05111 366 aa23.21■■□□□ 1.31
DDR1-265ENST00000509639 CATIPQ7Z7H3 387 aa23.21■■□□□ 1.31
DDR1-265ENST00000509639 RASEFQ8IZ41 740 aa23.21■■□□□ 1.31
DDR1-265ENST00000509639 IGDCC4Q8TDY8 1250 aa23.21■■□□□ 1.31
DDR1-265ENST00000509639 MYCP01106 439 aaPredicted RBP23.2■■□□□ 1.3
DDR1-265ENST00000509639 HOXC6P09630 235 aa23.2■■□□□ 1.3
DDR1-265ENST00000509639 SOX10P56693 466 aa23.2■■□□□ 1.3
DDR1-265ENST00000509639 TKFCQ3LXA3 575 aa23.2■■□□□ 1.3
DDR1-265ENST00000509639 TMTC2Q8N394 836 aa23.2■■□□□ 1.3
DDR1-265ENST00000509639 CHST13Q8NET6 341 aa23.2■■□□□ 1.3
DDR1-265ENST00000509639 TRIB2Q92519 343 aa23.2■■□□□ 1.3
DDR1-265ENST00000509639 LY9Q9HBG7 655 aa23.2■■□□□ 1.3
DDR1-265ENST00000509639 PNMA2Q9UL42 364 aa23.2■■□□□ 1.3
DDR1-265ENST00000509639 RIPK3Q9Y572 518 aa23.2■■□□□ 1.3
DDR1-265ENST00000509639 ZNF536O15090 1300 aa23.19■■□□□ 1.3
DDR1-265ENST00000509639 WDR19Q8NEZ3 1342 aa23.19■■□□□ 1.3
DDR1-265ENST00000509639 SH2B2O14492 632 aaPredicted RBP23.19■■□□□ 1.3
DDR1-265ENST00000509639 EIF5BO60841 1220 aaKnown RBP23.19■■□□□ 1.3
DDR1-265ENST00000509639 HMGB1P09429 215 aaKnown RBP23.19■■□□□ 1.3
DDR1-265ENST00000509639 SNAP25P60880 206 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms