RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 TCTN2Q96GX1 697 aa4.7□□□□□ -1.66
XRCC4-204ENST00000509268 CCDC74BQ96LY2 380 aa4.7□□□□□ -1.66
XRCC4-204ENST00000509268 SPATA25Q9BR10 227 aa4.7□□□□□ -1.66
XRCC4-204ENST00000509268 HDAC8Q9BY41 377 aa4.7□□□□□ -1.66
XRCC4-204ENST00000509268 KRTAP3-1Q9BYR8 98 aa4.7□□□□□ -1.66
XRCC4-204ENST00000509268 SCAND2PQ9GZW5 306 aaPredicted RBP4.7□□□□□ -1.66
XRCC4-204ENST00000509268 ACSL6Q9UKU0 697 aa4.7□□□□□ -1.66
XRCC4-204ENST00000509268 TTF2Q9UNY4 1162 aaKnown RBP4.7□□□□□ -1.66
XRCC4-204ENST00000509268 NUDT19A8MXV4 375 aa4.69□□□□□ -1.66
XRCC4-204ENST00000509268 NOBOXO60393 691 aa4.69□□□□□ -1.66
XRCC4-204ENST00000509268 PLCG1P19174 1290 aa4.69□□□□□ -1.66
XRCC4-204ENST00000509268 CNR2P34972 360 aa4.69□□□□□ -1.66
XRCC4-204ENST00000509268 ACVRL1P37023 503 aa4.69□□□□□ -1.66
XRCC4-204ENST00000509268 LIMS1P48059 325 aa4.69□□□□□ -1.66
XRCC4-204ENST00000509268 LSRQ86X29 649 aaPredicted RBP4.69□□□□□ -1.66
XRCC4-204ENST00000509268 FNIP1Q8TF40 1166 aa4.69□□□□□ -1.66
XRCC4-204ENST00000509268 EAF1Q96JC9 268 aaPredicted RBP4.69□□□□□ -1.66
XRCC4-204ENST00000509268 FCRL2Q96LA5 508 aaPredicted RBP4.69□□□□□ -1.66
XRCC4-204ENST00000509268 LNPKQ9C0E8 428 aa4.69□□□□□ -1.66
XRCC4-204ENST00000509268 TNFRSF12AQ9NP84 129 aa4.69□□□□□ -1.66
XRCC4-204ENST00000509268 SLPIP03973 132 aa4.68□□□□□ -1.66
XRCC4-204ENST00000509268 ZC3H14Q6PJT7 736 aaKnown RBP4.68□□□□□ -1.66
XRCC4-204ENST00000509268 RPTNQ6XPR3 784 aa4.68□□□□□ -1.66
XRCC4-204ENST00000509268 USP51Q70EK9 711 aa4.68□□□□□ -1.66
XRCC4-204ENST00000509268 FRMD6Q96NE9 622 aa4.68□□□□□ -1.66
XRCC4-204ENST00000509268 DUSP10Q9Y6W6 482 aa4.68□□□□□ -1.66
XRCC4-204ENST00000509268 A0A1W2PQ45 241 aaPredicted RBP4.67□□□□□ -1.66
XRCC4-204ENST00000509268 A0A1W2PQY0 241 aa4.67□□□□□ -1.66
XRCC4-204ENST00000509268 PRKCAP17252 672 aa4.67□□□□□ -1.66
XRCC4-204ENST00000509268 GJA9P57773 515 aa4.67□□□□□ -1.66
XRCC4-204ENST00000509268 FOXO4P98177 505 aa4.67□□□□□ -1.66
XRCC4-204ENST00000509268 DDX1Q92499 740 aaKnown RBP4.67□□□□□ -1.66
XRCC4-204ENST00000509268 LOXL4Q96JB6 756 aa4.67□□□□□ -1.66
XRCC4-204ENST00000509268 PMF1-BGLAPU3KQ54 211 aa4.67□□□□□ -1.66
XRCC4-204ENST00000509268 SYPP08247 313 aa4.66□□□□□ -1.66
XRCC4-204ENST00000509268 CHMP4BP1P59074 171 aa4.66□□□□□ -1.66
XRCC4-204ENST00000509268 HTRA3P83110 453 aa4.66□□□□□ -1.66
XRCC4-204ENST00000509268 PLEKHN1Q494U1 663 aaPredicted RBP4.66□□□□□ -1.66
XRCC4-204ENST00000509268 DVL3Q92997 716 aaPredicted RBP4.66□□□□□ -1.66
XRCC4-204ENST00000509268 C8orf49Q96NF6 230 aa4.66□□□□□ -1.66
XRCC4-204ENST00000509268 A0A1B0GTL3 188 aa4.65□□□□□ -1.66
XRCC4-204ENST00000509268 RNF4P78317 190 aa4.65□□□□□ -1.66
XRCC4-204ENST00000509268 CCDC85BQ15834 202 aaPredicted RBP4.65□□□□□ -1.66
XRCC4-204ENST00000509268 BBS9Q3SYG4 887 aa4.65□□□□□ -1.66
XRCC4-204ENST00000509268 SLCO6A1Q86UG4 719 aa4.65□□□□□ -1.66
XRCC4-204ENST00000509268 ADGRG2Q8IZP9 1017 aa4.65□□□□□ -1.66
XRCC4-204ENST00000509268 CARFQ8N187 725 aa4.65□□□□□ -1.66
XRCC4-204ENST00000509268 RNF38Q9H0F5 515 aa4.65□□□□□ -1.66
XRCC4-204ENST00000509268 CORINQ9Y5Q5 1042 aa4.65□□□□□ -1.66
XRCC4-204ENST00000509268 FZD7O75084 574 aa4.65□□□□□ -1.67
XRCC4-204ENST00000509268 PLA2G1BP04054 148 aaKnown RBP4.65□□□□□ -1.67
XRCC4-204ENST00000509268 LIG3P49916 1009 aa4.65□□□□□ -1.67
XRCC4-204ENST00000509268 ZNF200P98182 395 aaPredicted RBP4.65□□□□□ -1.67
XRCC4-204ENST00000509268 ATP2B2Q01814 1243 aa4.65□□□□□ -1.67
XRCC4-204ENST00000509268 KIR3DS1Q14943 382 aa4.65□□□□□ -1.67
XRCC4-204ENST00000509268 CRB2Q5IJ48 1285 aa4.65□□□□□ -1.67
XRCC4-204ENST00000509268 CRIP3Q6Q6R5 217 aa4.65□□□□□ -1.67
XRCC4-204ENST00000509268 CCDC84Q86UT8 332 aaPredicted RBP4.65□□□□□ -1.67
XRCC4-204ENST00000509268 NUP43Q8NFH3 380 aa4.65□□□□□ -1.67
XRCC4-204ENST00000509268 GPR55Q9Y2T6 319 aaPredicted RBP4.65□□□□□ -1.67
XRCC4-204ENST00000509268 SOWAHDA6NJG2 315 aa4.64□□□□□ -1.67
XRCC4-204ENST00000509268 FKTNO75072 461 aa4.64□□□□□ -1.67
XRCC4-204ENST00000509268 PLATP00750 562 aa4.64□□□□□ -1.67
XRCC4-204ENST00000509268 RLBP1P12271 317 aa4.64□□□□□ -1.67
XRCC4-204ENST00000509268 FBLN1P23142 703 aa4.64□□□□□ -1.67
XRCC4-204ENST00000509268 MAPK8P45983 427 aa4.64□□□□□ -1.67
XRCC4-204ENST00000509268 ZPBP2Q6X784 338 aa4.64□□□□□ -1.67
XRCC4-204ENST00000509268 Q8N1X5 172 aa4.64□□□□□ -1.67
XRCC4-204ENST00000509268 CHST13Q8NET6 341 aa4.64□□□□□ -1.67
XRCC4-204ENST00000509268 ZNF526Q8TF50 670 aaPredicted RBP4.64□□□□□ -1.67
XRCC4-204ENST00000509268 PRR36Q9H6K5 1346 aa4.63□□□□□ -1.67
XRCC4-204ENST00000509268 TFE3P19532 575 aaPredicted RBP4.63□□□□□ -1.67
XRCC4-204ENST00000509268 FMR1Q06787 632 aaKnown RBP eCLIP4.63□□□□□ -1.67
XRCC4-204ENST00000509268 ZFPM1Q8IX07 1006 aa4.63□□□□□ -1.67
XRCC4-204ENST00000509268 FAN1Q9Y2M0 1017 aa4.63□□□□□ -1.67
XRCC4-204ENST00000509268 GBP1P32455 592 aa4.62□□□□□ -1.67
XRCC4-204ENST00000509268 DLX2Q07687 328 aaPredicted RBP4.62□□□□□ -1.67
XRCC4-204ENST00000509268 PAQR3Q6TCH7 311 aa4.62□□□□□ -1.67
XRCC4-204ENST00000509268 CCDC82Q8N4S0 544 aa4.62□□□□□ -1.67
XRCC4-204ENST00000509268 RETREG2Q8NC44 543 aa4.62□□□□□ -1.67
XRCC4-204ENST00000509268 JARID2Q92833 1246 aaPredicted RBP4.62□□□□□ -1.67
XRCC4-204ENST00000509268 PRDM14Q9GZV8 571 aa4.62□□□□□ -1.67
XRCC4-204ENST00000509268 CHURC1-FNTBB4DL54 471 aa4.61□□□□□ -1.67
XRCC4-204ENST00000509268 SRGAP3O43295 1099 aa4.61□□□□□ -1.67
XRCC4-204ENST00000509268 CYBBP04839 570 aa4.61□□□□□ -1.67
XRCC4-204ENST00000509268 NCAM1P13591 858 aa4.61□□□□□ -1.67
XRCC4-204ENST00000509268 ATF2P15336 505 aa4.61□□□□□ -1.67
XRCC4-204ENST00000509268 MAPK1P28482 360 aa4.61□□□□□ -1.67
XRCC4-204ENST00000509268 NBPF9Q3BBW0 867 aa4.61□□□□□ -1.67
XRCC4-204ENST00000509268 PHACTR4Q8IZ21 702 aa4.61□□□□□ -1.67
XRCC4-204ENST00000509268 SH3RF3Q8TEJ3 882 aaPredicted RBP4.61□□□□□ -1.67
XRCC4-204ENST00000509268 KIF2CQ99661 725 aa4.61□□□□□ -1.67
XRCC4-204ENST00000509268 WDR26Q9H7D7 661 aa4.61□□□□□ -1.67
XRCC4-204ENST00000509268 ERVK13-1Q9NX77 482 aa4.61□□□□□ -1.67
XRCC4-204ENST00000509268 TSC22D4Q9Y3Q8 395 aa4.61□□□□□ -1.67
XRCC4-204ENST00000509268 ARID3CA6NKF2 412 aa4.61□□□□□ -1.67
XRCC4-204ENST00000509268 RGS13O14921 159 aa4.61□□□□□ -1.67
XRCC4-204ENST00000509268 BPNT1O95861 308 aa4.61□□□□□ -1.67
XRCC4-204ENST00000509268 SARSP49591 514 aaKnown RBP4.61□□□□□ -1.67
XRCC4-204ENST00000509268 TBC1D10BQ4KMP7 808 aaPredicted RBP4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms