RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 IFFO2Q5TF58 517 aa8.58□□□□□ -1.04
TOPBP1-207ENST00000509162 RCSD1Q6JBY9 416 aa8.58□□□□□ -1.04
TOPBP1-207ENST00000509162 TICAM2Q86XR7 235 aa8.58□□□□□ -1.04
TOPBP1-207ENST00000509162 CCDC136Q96JN2 1154 aa8.58□□□□□ -1.04
TOPBP1-207ENST00000509162 PARK7Q99497 189 aaKnown RBP8.58□□□□□ -1.04
TOPBP1-207ENST00000509162 BEGAINQ9BUH8 593 aa8.58□□□□□ -1.04
TOPBP1-207ENST00000509162 GINM1Q9NU53 330 aa8.58□□□□□ -1.04
TOPBP1-207ENST00000509162 FBXO28Q9NVF7 368 aa8.58□□□□□ -1.04
TOPBP1-207ENST00000509162 TMX2Q9Y320 296 aa8.58□□□□□ -1.04
TOPBP1-207ENST00000509162 DOCK3Q8IZD9 2030 aa8.58□□□□□ -1.04
TOPBP1-207ENST00000509162 USP17L10C9JJH3 530 aa8.57□□□□□ -1.04
TOPBP1-207ENST00000509162 NDUFB10O96000 172 aa8.57□□□□□ -1.04
TOPBP1-207ENST00000509162 APPP05067 770 aa8.57□□□□□ -1.04
TOPBP1-207ENST00000509162 HOXA7P31268 230 aaPredicted RBP8.57□□□□□ -1.04
TOPBP1-207ENST00000509162 CLCN1P35523 988 aa8.57□□□□□ -1.04
TOPBP1-207ENST00000509162 HERVK_113P62684 666 aa8.57□□□□□ -1.04
TOPBP1-207ENST00000509162 MCM6Q14566 821 aa8.57□□□□□ -1.04
TOPBP1-207ENST00000509162 USP17L2Q6R6M4 530 aa8.57□□□□□ -1.04
TOPBP1-207ENST00000509162 CTU1Q7Z7A3 348 aaKnown RBP8.57□□□□□ -1.04
TOPBP1-207ENST00000509162 TNS4Q8IZW8 715 aa8.57□□□□□ -1.04
TOPBP1-207ENST00000509162 SPICE1Q8N0Z3 855 aa8.57□□□□□ -1.04
TOPBP1-207ENST00000509162 REPS2Q8NFH8 660 aa8.57□□□□□ -1.04
TOPBP1-207ENST00000509162 NEDD1Q8NHV4 660 aa8.57□□□□□ -1.04
TOPBP1-207ENST00000509162 STAG1Q8WVM7 1258 aa8.57□□□□□ -1.04
TOPBP1-207ENST00000509162 ZFRQ96KR1 1074 aaKnown RBP8.57□□□□□ -1.04
TOPBP1-207ENST00000509162 P2RX7Q99572 595 aaKnown RBP8.57□□□□□ -1.04
TOPBP1-207ENST00000509162 ESYT1Q9BSJ8 1104 aa8.57□□□□□ -1.04
TOPBP1-207ENST00000509162 DSCC1Q9BVC3 393 aa8.57□□□□□ -1.04
TOPBP1-207ENST00000509162 TRIM34Q9BYJ4 488 aa8.57□□□□□ -1.04
TOPBP1-207ENST00000509162 TBC1D2Q9BYX2 928 aa8.57□□□□□ -1.04
TOPBP1-207ENST00000509162 PORCNQ9H237 461 aa8.57□□□□□ -1.04
TOPBP1-207ENST00000509162 RPAP3Q9H6T3 665 aaPredicted RBP8.57□□□□□ -1.04
TOPBP1-207ENST00000509162 VCPKMTQ9H867 229 aa8.57□□□□□ -1.04
TOPBP1-207ENST00000509162 AS3MTQ9HBK9 375 aa8.57□□□□□ -1.04
TOPBP1-207ENST00000509162 ZFYVE28Q9HCC9 887 aa8.57□□□□□ -1.04
TOPBP1-207ENST00000509162 MTMR4Q9NYA4 1195 aa8.57□□□□□ -1.04
TOPBP1-207ENST00000509162 BTBD7Q9P203 1132 aa8.57□□□□□ -1.04
TOPBP1-207ENST00000509162 RBPJLQ9UBG7 517 aa8.57□□□□□ -1.04
TOPBP1-207ENST00000509162 MORF4L1Q9UBU8 362 aa8.57□□□□□ -1.04
TOPBP1-207ENST00000509162 GABRQQ9UN88 632 aa8.57□□□□□ -1.04
TOPBP1-207ENST00000509162 PTCH2Q9Y6C5 1203 aa8.57□□□□□ -1.04
TOPBP1-207ENST00000509162 SOWAHBA6NEL2 793 aa8.56□□□□□ -1.04
TOPBP1-207ENST00000509162 TRAK2O60296 914 aa8.56□□□□□ -1.04
TOPBP1-207ENST00000509162 CYP21A2P08686 494 aa8.56□□□□□ -1.04
TOPBP1-207ENST00000509162 ANTXR2P58335 489 aa8.56□□□□□ -1.04
TOPBP1-207ENST00000509162 SP3Q02447 781 aa8.56□□□□□ -1.04
TOPBP1-207ENST00000509162 PRKCZQ05513 592 aa8.56□□□□□ -1.04
TOPBP1-207ENST00000509162 SLC35G1Q2M3R5 365 aa8.56□□□□□ -1.04
TOPBP1-207ENST00000509162 LRRFIP1Q32MZ4 808 aaKnown RBP8.56□□□□□ -1.04
TOPBP1-207ENST00000509162 Q3C1V9 767 aa8.56□□□□□ -1.04
TOPBP1-207ENST00000509162 CATSPERGQ6ZRH7 1159 aa8.56□□□□□ -1.04
TOPBP1-207ENST00000509162 NYAP1Q6ZVC0 841 aa8.56□□□□□ -1.04
TOPBP1-207ENST00000509162 CYB5R4Q7L1T6 521 aa8.56□□□□□ -1.04
TOPBP1-207ENST00000509162 FASTKD5Q7L8L6 764 aaKnown RBP8.56□□□□□ -1.04
TOPBP1-207ENST00000509162 PACS2Q86VP3 889 aa8.56□□□□□ -1.04
TOPBP1-207ENST00000509162 ANKRD13CQ8N6S4 541 aa8.56□□□□□ -1.04
TOPBP1-207ENST00000509162 ATG4CQ96DT6 458 aa8.56□□□□□ -1.04
TOPBP1-207ENST00000509162 ABHD8Q96I13 439 aa8.56□□□□□ -1.04
TOPBP1-207ENST00000509162 CCDC17Q96LX7 622 aa8.56□□□□□ -1.04
TOPBP1-207ENST00000509162 FEZ1Q99689 392 aa8.56□□□□□ -1.04
TOPBP1-207ENST00000509162 SENP2Q9HC62 589 aa8.56□□□□□ -1.04
TOPBP1-207ENST00000509162 GPCPD1Q9NPB8 672 aa8.56□□□□□ -1.04
TOPBP1-207ENST00000509162 HPS5Q9UPZ3 1129 aa8.56□□□□□ -1.04
TOPBP1-207ENST00000509162 TRIM17Q9Y577 477 aa8.56□□□□□ -1.04
TOPBP1-207ENST00000509162 C19orf81C9J6K1 198 aa8.55□□□□□ -1.04
TOPBP1-207ENST00000509162 CENPBP07199 599 aaPredicted RBP8.55□□□□□ -1.04
TOPBP1-207ENST00000509162 TFAP4Q01664 338 aa8.55□□□□□ -1.04
TOPBP1-207ENST00000509162 SKIV2LQ15477 1246 aaKnown RBP8.55□□□□□ -1.04
TOPBP1-207ENST00000509162 FAM110CQ1W6H9 321 aa8.55□□□□□ -1.04
TOPBP1-207ENST00000509162 FAM83BQ5T0W9 1011 aa8.55□□□□□ -1.04
TOPBP1-207ENST00000509162 LBX2Q6XYB7 198 aa8.55□□□□□ -1.04
TOPBP1-207ENST00000509162 NACAP1Q9BZK3 213 aa8.55□□□□□ -1.04
TOPBP1-207ENST00000509162 PPP4R2Q9NY27 417 aa8.55□□□□□ -1.04
TOPBP1-207ENST00000509162 NYAP2Q9P242 653 aa8.55□□□□□ -1.04
TOPBP1-207ENST00000509162 FRMPD3Q5JV73 1810 aa8.54□□□□□ -1.04
TOPBP1-207ENST00000509162 B4E1Z4 1266 aa8.54□□□□□ -1.04
TOPBP1-207ENST00000509162 HIP1O00291 1037 aa8.54□□□□□ -1.04
TOPBP1-207ENST00000509162 WDR46O15213 610 aaKnown RBP8.54□□□□□ -1.04
TOPBP1-207ENST00000509162 PRSS12P56730 875 aa8.54□□□□□ -1.04
TOPBP1-207ENST00000509162 ATP2B2Q01814 1243 aa8.54□□□□□ -1.04
TOPBP1-207ENST00000509162 AKNAD1Q5T1N1 836 aa8.54□□□□□ -1.04
TOPBP1-207ENST00000509162 OTUD7BQ6GQQ9 843 aa8.54□□□□□ -1.04
TOPBP1-207ENST00000509162 MB21D2Q8IYB1 491 aaPredicted RBP8.54□□□□□ -1.04
TOPBP1-207ENST00000509162 MAP4K1Q92918 833 aa8.54□□□□□ -1.04
TOPBP1-207ENST00000509162 MKL1Q969V6 931 aa8.54□□□□□ -1.04
TOPBP1-207ENST00000509162 CHMP4CQ96CF2 233 aa8.54□□□□□ -1.04
TOPBP1-207ENST00000509162 ZKSCAN3Q9BRR0 538 aa8.54□□□□□ -1.04
TOPBP1-207ENST00000509162 KANSL2Q9H9L4 492 aa8.54□□□□□ -1.04
TOPBP1-207ENST00000509162 EFCC1Q9HA90 598 aa8.54□□□□□ -1.04
TOPBP1-207ENST00000509162 CABP5Q9NP86 173 aa8.54□□□□□ -1.04
TOPBP1-207ENST00000509162 TMOD4Q9NZQ9 345 aa8.54□□□□□ -1.04
TOPBP1-207ENST00000509162 RBM27Q9P2N5 1060 aaKnown RBP8.54□□□□□ -1.04
TOPBP1-207ENST00000509162 SEPT9Q9UHD8 586 aaPredicted RBP8.54□□□□□ -1.04
TOPBP1-207ENST00000509162 ADAMTS5Q9UNA0 930 aa8.54□□□□□ -1.04
TOPBP1-207ENST00000509162 PTPN22Q9Y2R2 807 aa8.54□□□□□ -1.04
TOPBP1-207ENST00000509162 RBM8AQ9Y5S9 174 aaKnown RBP8.54□□□□□ -1.04
TOPBP1-207ENST00000509162 SMCHD1A6NHR9 2005 aa8.53□□□□□ -1.04
TOPBP1-207ENST00000509162 USP17L15C9J2P7 530 aa8.53□□□□□ -1.04
TOPBP1-207ENST00000509162 USP17L13C9JLJ4 530 aa8.53□□□□□ -1.04
TOPBP1-207ENST00000509162 USP17L11C9JVI0 530 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms