RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 MMP19Q99542 508 aa17.55■□□□□ 0.4
UBE2D3-228ENST00000508974 DIAPH3Q9NSV4 1193 aa17.55■□□□□ 0.4
UBE2D3-228ENST00000508974 ANAPC4Q9UJX5 808 aa17.55■□□□□ 0.4
UBE2D3-228ENST00000508974 ZNF214Q9UL59 606 aaPredicted RBP17.55■□□□□ 0.4
UBE2D3-228ENST00000508974 CTDP1Q9Y5B0 961 aaPredicted RBP17.55■□□□□ 0.4
UBE2D3-228ENST00000508974 SLC25A27O95847 323 aa17.54■□□□□ 0.4
UBE2D3-228ENST00000508974 BMP3P12645 472 aa17.54■□□□□ 0.4
UBE2D3-228ENST00000508974 IKQ13123 557 aaPredicted RBP17.54■□□□□ 0.4
UBE2D3-228ENST00000508974 ALX1Q15699 326 aa17.54■□□□□ 0.4
UBE2D3-228ENST00000508974 RIOX2Q8IUF8 465 aa17.54■□□□□ 0.4
UBE2D3-228ENST00000508974 ANKLE1Q8NAG6 615 aa17.54■□□□□ 0.4
UBE2D3-228ENST00000508974 PRPF38AQ8NAV1 312 aaKnown RBP17.54■□□□□ 0.4
UBE2D3-228ENST00000508974 GMCL1P1Q8NEA9 526 aa17.54■□□□□ 0.4
UBE2D3-228ENST00000508974 TRPV1Q8NER1 839 aa17.54■□□□□ 0.4
UBE2D3-228ENST00000508974 RAVER2Q9HCJ3 691 aaKnown RBP17.54■□□□□ 0.4
UBE2D3-228ENST00000508974 IL17RBQ9NRM6 502 aa17.54■□□□□ 0.4
UBE2D3-228ENST00000508974 OGDHLQ9ULD0 1010 aa17.54■□□□□ 0.4
UBE2D3-228ENST00000508974 TMEM232C9JQI7 657 aa17.53■□□□□ 0.4
UBE2D3-228ENST00000508974 EVI5O60447 810 aa17.53■□□□□ 0.4
UBE2D3-228ENST00000508974 ZBED4O75132 1171 aa17.53■□□□□ 0.4
UBE2D3-228ENST00000508974 MCCP23508 829 aa17.53■□□□□ 0.4
UBE2D3-228ENST00000508974 MNX1P50219 401 aaPredicted RBP17.53■□□□□ 0.4
UBE2D3-228ENST00000508974 KCTD2Q14681 263 aa17.53■□□□□ 0.4
UBE2D3-228ENST00000508974 ANO1Q5XXA6 986 aa17.53■□□□□ 0.4
UBE2D3-228ENST00000508974 LHX8Q68G74 356 aa17.53■□□□□ 0.4
UBE2D3-228ENST00000508974 NBPF3Q9H094 633 aa17.53■□□□□ 0.4
UBE2D3-228ENST00000508974 C11orf49Q9H6J7 331 aa17.53■□□□□ 0.4
UBE2D3-228ENST00000508974 SLC5A4Q9NY91 659 aa17.53■□□□□ 0.4
UBE2D3-228ENST00000508974 FEM1BQ9UK73 627 aa17.53■□□□□ 0.4
UBE2D3-228ENST00000508974 RIPK3Q9Y572 518 aa17.53■□□□□ 0.4
UBE2D3-228ENST00000508974 ORC4O43929 436 aa17.52■□□□□ 0.4
UBE2D3-228ENST00000508974 MFAP1P55081 439 aaKnown RBP17.52■□□□□ 0.4
UBE2D3-228ENST00000508974 PRAMEF19Q5SWL8 479 aa17.52■□□□□ 0.4
UBE2D3-228ENST00000508974 KCTD1Q719H9 257 aa17.52■□□□□ 0.4
UBE2D3-228ENST00000508974 ABRAQ8N0Z2 381 aa17.52■□□□□ 0.4
UBE2D3-228ENST00000508974 MAML3Q96JK9 1138 aa17.52■□□□□ 0.4
UBE2D3-228ENST00000508974 TEX13BQ9BXU2 312 aa17.52■□□□□ 0.4
UBE2D3-228ENST00000508974 COLQQ9Y215 455 aaPredicted RBP17.52■□□□□ 0.4
UBE2D3-228ENST00000508974 CYBAP13498 195 aa17.51■□□□□ 0.39
UBE2D3-228ENST00000508974 CAPN2P17655 700 aa17.51■□□□□ 0.39
UBE2D3-228ENST00000508974 SLC1A4P43007 532 aa17.51■□□□□ 0.39
UBE2D3-228ENST00000508974 OLFML2BQ68BL8 750 aa17.51■□□□□ 0.39
UBE2D3-228ENST00000508974 CHRDL2Q6WN34 429 aa17.51■□□□□ 0.39
UBE2D3-228ENST00000508974 TICAM2Q86XR7 235 aa17.51■□□□□ 0.39
UBE2D3-228ENST00000508974 TBC1D10CQ8IV04 446 aa17.51■□□□□ 0.39
UBE2D3-228ENST00000508974 C7orf61Q8IZ16 206 aa17.51■□□□□ 0.39
UBE2D3-228ENST00000508974 HOMER2Q9NSB8 354 aa17.51■□□□□ 0.39
UBE2D3-228ENST00000508974 DDX20Q9UHI6 824 aaKnown RBP17.51■□□□□ 0.39
UBE2D3-228ENST00000508974 SYNPO2Q9UMS6 1093 aa17.51■□□□□ 0.39
UBE2D3-228ENST00000508974 NR2E3Q9Y5X4 410 aa17.51■□□□□ 0.39
UBE2D3-228ENST00000508974 ZMYM6O95789 1325 aa17.5■□□□□ 0.39
UBE2D3-228ENST00000508974 STAT2P52630 851 aa17.5■□□□□ 0.39
UBE2D3-228ENST00000508974 SNAP25P60880 206 aa17.5■□□□□ 0.39
UBE2D3-228ENST00000508974 CCDC96Q2M329 555 aa17.5■□□□□ 0.39
UBE2D3-228ENST00000508974 HABP4Q5JVS0 413 aaKnown RBP17.5■□□□□ 0.39
UBE2D3-228ENST00000508974 SLC38A10Q9HBR0 1119 aa17.5■□□□□ 0.39
UBE2D3-228ENST00000508974 PFASO15067 1338 aa17.49■□□□□ 0.39
UBE2D3-228ENST00000508974 NEDD4P46934 1319 aa17.49■□□□□ 0.39
UBE2D3-228ENST00000508974 HIP1O00291 1037 aa17.49■□□□□ 0.39
UBE2D3-228ENST00000508974 GSPT1P15170 499 aaKnown RBP17.49■□□□□ 0.39
UBE2D3-228ENST00000508974 COPB2P35606 906 aa17.49■□□□□ 0.39
UBE2D3-228ENST00000508974 PPP4R3BQ5MIZ7 849 aa17.49■□□□□ 0.39
UBE2D3-228ENST00000508974 AKNAD1Q5T1N1 836 aa17.49■□□□□ 0.39
UBE2D3-228ENST00000508974 TTC22Q5TAA0 569 aa17.49■□□□□ 0.39
UBE2D3-228ENST00000508974 MFSD6Q6ZSS7 791 aa17.49■□□□□ 0.39
UBE2D3-228ENST00000508974 GMCL1Q96IK5 515 aa17.49■□□□□ 0.39
UBE2D3-228ENST00000508974 PCDH10Q9P2E7 1040 aa17.49■□□□□ 0.39
UBE2D3-228ENST00000508974 MCM3APO60318 1980 aa17.48■□□□□ 0.39
UBE2D3-228ENST00000508974 ZNF213O14771 459 aa17.48■□□□□ 0.39
UBE2D3-228ENST00000508974 IGHA2P01877 340 aa17.48■□□□□ 0.39
UBE2D3-228ENST00000508974 FGRP09769 529 aa17.48■□□□□ 0.39
UBE2D3-228ENST00000508974 CCDC174Q6PII3 467 aa17.48■□□□□ 0.39
UBE2D3-228ENST00000508974 DDX11Q96FC9 970 aa17.48■□□□□ 0.39
UBE2D3-228ENST00000508974 ZKSCAN3Q9BRR0 538 aa17.48■□□□□ 0.39
UBE2D3-228ENST00000508974 IL25Q9H293 177 aa17.48■□□□□ 0.39
UBE2D3-228ENST00000508974 FRMPD2Q68DX3 1309 aaPredicted RBP17.47■□□□□ 0.39
UBE2D3-228ENST00000508974 SMCHD1A6NHR9 2005 aa17.47■□□□□ 0.39
UBE2D3-228ENST00000508974 ZNF792Q3KQV3 632 aa17.47■□□□□ 0.39
UBE2D3-228ENST00000508974 GJC2Q5T442 439 aaPredicted RBP17.47■□□□□ 0.39
UBE2D3-228ENST00000508974 RCSD1Q6JBY9 416 aa17.47■□□□□ 0.39
UBE2D3-228ENST00000508974 FAM160B2Q86V87 743 aa17.47■□□□□ 0.39
UBE2D3-228ENST00000508974 ANKRD35Q8N283 1001 aa17.47■□□□□ 0.39
UBE2D3-228ENST00000508974 CHURC1Q8WUH1 139 aa17.47■□□□□ 0.39
UBE2D3-228ENST00000508974 STAG1Q8WVM7 1258 aa17.47■□□□□ 0.39
UBE2D3-228ENST00000508974 AGBL1Q96MI9 1066 aa17.47■□□□□ 0.39
UBE2D3-228ENST00000508974 TMEM47Q9BQJ4 181 aa17.47■□□□□ 0.39
UBE2D3-228ENST00000508974 TINF2Q9BSI4 451 aa17.47■□□□□ 0.39
UBE2D3-228ENST00000508974 ZMYND8Q9ULU4 1186 aaPredicted RBP17.47■□□□□ 0.39
UBE2D3-228ENST00000508974 ATP2A1O14983 1001 aa17.46■□□□□ 0.39
UBE2D3-228ENST00000508974 MSCO60682 206 aa17.46■□□□□ 0.39
UBE2D3-228ENST00000508974 TAL1P17542 331 aaPredicted RBP17.46■□□□□ 0.39
UBE2D3-228ENST00000508974 SYN1P17600 705 aa17.46■□□□□ 0.39
UBE2D3-228ENST00000508974 SLC16A2P36021 539 aa17.46■□□□□ 0.39
UBE2D3-228ENST00000508974 SENP6Q9GZR1 1112 aaPredicted RBP17.46■□□□□ 0.39
UBE2D3-228ENST00000508974 RNF41Q9H4P4 317 aaPredicted RBP17.46■□□□□ 0.39
UBE2D3-228ENST00000508974 GPCPD1Q9NPB8 672 aa17.46■□□□□ 0.39
UBE2D3-228ENST00000508974 PRR12Q9ULL5 1215 aa17.46■□□□□ 0.39
UBE2D3-228ENST00000508974 DNAH12Q6ZR08 3092 aa17.45■□□□□ 0.38
UBE2D3-228ENST00000508974 SEPT4O43236 478 aa17.45■□□□□ 0.38
UBE2D3-228ENST00000508974 SLC34A2O95436 690 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms