RNA–Protein interactions for RNA: ENST00000508895.5

SNCA-211, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNCA, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-211ENST00000508895 UBXN2AP68543 259 aa10.26□□□□□ -0.77
SNCA-211ENST00000508895 PDE4BQ07343 736 aa10.26□□□□□ -0.77
SNCA-211ENST00000508895 RRP12Q5JTH9 1297 aaKnown RBP10.26□□□□□ -0.77
SNCA-211ENST00000508895 SLFN13Q68D06 897 aa10.26□□□□□ -0.77
SNCA-211ENST00000508895 LHX8Q68G74 356 aa10.26□□□□□ -0.77
SNCA-211ENST00000508895 KCTD1Q719H9 257 aa10.26□□□□□ -0.77
SNCA-211ENST00000508895 NCAPG2Q86XI2 1143 aa10.26□□□□□ -0.77
SNCA-211ENST00000508895 GTF3C2Q8WUA4 911 aaPredicted RBP10.26□□□□□ -0.77
SNCA-211ENST00000508895 FGD4Q96M96 766 aa10.26□□□□□ -0.77
SNCA-211ENST00000508895 APBA2Q99767 749 aa10.26□□□□□ -0.77
SNCA-211ENST00000508895 ZKSCAN3Q9BRR0 538 aa10.26□□□□□ -0.77
SNCA-211ENST00000508895 RAVER2Q9HCJ3 691 aaKnown RBP10.26□□□□□ -0.77
SNCA-211ENST00000508895 GOPCQ9HD26 462 aa10.26□□□□□ -0.77
SNCA-211ENST00000508895 MTMR7Q9Y216 660 aa10.26□□□□□ -0.77
SNCA-211ENST00000508895 BAZ2BQ9UIF8 2168 aaKnown RBP10.26□□□□□ -0.77
SNCA-211ENST00000508895 ZNF536O15090 1300 aa10.26□□□□□ -0.77
SNCA-211ENST00000508895 TSPY2A6NKD2 308 aa10.25□□□□□ -0.77
SNCA-211ENST00000508895 RGS2P41220 211 aa10.25□□□□□ -0.77
SNCA-211ENST00000508895 MFAP1P55081 439 aaKnown RBP10.25□□□□□ -0.77
SNCA-211ENST00000508895 RIOX2Q8IUF8 465 aa10.25□□□□□ -0.77
SNCA-211ENST00000508895 GMCL1P1Q8NEA9 526 aa10.25□□□□□ -0.77
SNCA-211ENST00000508895 SHCBP1Q8NEM2 672 aa10.25□□□□□ -0.77
SNCA-211ENST00000508895 STAG1Q8WVM7 1258 aa10.25□□□□□ -0.77
SNCA-211ENST00000508895 KIFC2Q96AC6 838 aa10.25□□□□□ -0.77
SNCA-211ENST00000508895 SLF1Q9BQI6 1058 aa10.25□□□□□ -0.77
SNCA-211ENST00000508895 TMEM47Q9BQJ4 181 aa10.25□□□□□ -0.77
SNCA-211ENST00000508895 ESYT1Q9BSJ8 1104 aa10.25□□□□□ -0.77
SNCA-211ENST00000508895 DSCC1Q9BVC3 393 aa10.25□□□□□ -0.77
SNCA-211ENST00000508895 CPVLQ9H3G5 476 aa10.25□□□□□ -0.77
SNCA-211ENST00000508895 SH2D4AQ9H788 454 aa10.25□□□□□ -0.77
SNCA-211ENST00000508895 TMEM232C9JQI7 657 aa10.24□□□□□ -0.77
SNCA-211ENST00000508895 HOXC6P09630 235 aa10.24□□□□□ -0.77
SNCA-211ENST00000508895 ZKSCAN1P17029 563 aaPredicted RBP10.24□□□□□ -0.77
SNCA-211ENST00000508895 SLC16A2P36021 539 aa10.24□□□□□ -0.77
SNCA-211ENST00000508895 STAT3P40763 770 aa10.24□□□□□ -0.77
SNCA-211ENST00000508895 SLC4A3P48751 1232 aa10.24□□□□□ -0.77
SNCA-211ENST00000508895 AKNAD1Q5T1N1 836 aa10.24□□□□□ -0.77
SNCA-211ENST00000508895 ANO1Q5XXA6 986 aa10.24□□□□□ -0.77
SNCA-211ENST00000508895 STOX1Q6ZVD7 989 aa10.24□□□□□ -0.77
SNCA-211ENST00000508895 CYB5R4Q7L1T6 521 aa10.24□□□□□ -0.77
SNCA-211ENST00000508895 CPXCR1Q8N123 301 aa10.24□□□□□ -0.77
SNCA-211ENST00000508895 RUFY2Q8WXA3 655 aa10.24□□□□□ -0.77
SNCA-211ENST00000508895 SOCS4Q8WXH5 440 aa10.24□□□□□ -0.77
SNCA-211ENST00000508895 PAWRQ96IZ0 340 aaKnown RBP10.24□□□□□ -0.77
SNCA-211ENST00000508895 AGBL1Q96MI9 1066 aa10.24□□□□□ -0.77
SNCA-211ENST00000508895 SENP2Q9HC62 589 aa10.24□□□□□ -0.77
SNCA-211ENST00000508895 STX8Q9UNK0 236 aa10.24□□□□□ -0.77
SNCA-211ENST00000508895 FRMPD2Q68DX3 1309 aaPredicted RBP10.24□□□□□ -0.77
SNCA-211ENST00000508895 RPTORQ8N122 1335 aa10.24□□□□□ -0.77
SNCA-211ENST00000508895 B4E1Z4 1266 aa10.23□□□□□ -0.77
SNCA-211ENST00000508895 FARP2O94887 1054 aaPredicted RBP10.23□□□□□ -0.77
SNCA-211ENST00000508895 TFRCP02786 760 aaKnown RBP10.23□□□□□ -0.77
SNCA-211ENST00000508895 BMP3P12645 472 aa10.23□□□□□ -0.77
SNCA-211ENST00000508895 CYBAP13498 195 aa10.23□□□□□ -0.77
SNCA-211ENST00000508895 PTGS1P23219 599 aa10.23□□□□□ -0.77
SNCA-211ENST00000508895 CCNA1P78396 465 aa10.23□□□□□ -0.77
SNCA-211ENST00000508895 IRX5P78411 483 aaPredicted RBP10.23□□□□□ -0.77
SNCA-211ENST00000508895 ZNF792Q3KQV3 632 aa10.23□□□□□ -0.77
SNCA-211ENST00000508895 MB21D1Q8N884 522 aa10.23□□□□□ -0.77
SNCA-211ENST00000508895 LENG1Q96BZ8 264 aaPredicted RBP10.23□□□□□ -0.77
SNCA-211ENST00000508895 GMCL1Q96IK5 515 aa10.23□□□□□ -0.77
SNCA-211ENST00000508895 MAML3Q96JK9 1138 aa10.23□□□□□ -0.77
SNCA-211ENST00000508895 PURBQ96QR8 312 aaKnown RBP10.23□□□□□ -0.77
SNCA-211ENST00000508895 LSG1Q9H089 658 aaKnown RBP10.23□□□□□ -0.77
SNCA-211ENST00000508895 SLC38A10Q9HBR0 1119 aa10.23□□□□□ -0.77
SNCA-211ENST00000508895 TOMM22Q9NS69 142 aa10.23□□□□□ -0.77
SNCA-211ENST00000508895 ASTN1O14525 1302 aa10.23□□□□□ -0.77
SNCA-211ENST00000508895 PFASO15067 1338 aa10.23□□□□□ -0.77
SNCA-211ENST00000508895 LRRC37A2A6NM11 1700 aa10.22□□□□□ -0.77
SNCA-211ENST00000508895 DNAJC25-GNG10A0A024R161 153 aa10.22□□□□□ -0.77
SNCA-211ENST00000508895 H0YGN5 161 aa10.22□□□□□ -0.77
SNCA-211ENST00000508895 ADCY6O43306 1168 aa10.22□□□□□ -0.77
SNCA-211ENST00000508895 KDM4AO75164 1064 aa10.22□□□□□ -0.77
SNCA-211ENST00000508895 SLC3A2P08195 630 aaKnown RBP10.22□□□□□ -0.77
SNCA-211ENST00000508895 SLC35G1Q2M3R5 365 aa10.22□□□□□ -0.77
SNCA-211ENST00000508895 MUM1L1Q5H9M0 696 aa10.22□□□□□ -0.77
SNCA-211ENST00000508895 SNRNP48Q6IEG0 339 aaKnown RBP10.22□□□□□ -0.77
SNCA-211ENST00000508895 CCDC174Q6PII3 467 aa10.22□□□□□ -0.77
SNCA-211ENST00000508895 CCAR1Q8IX12 1150 aaKnown RBP10.22□□□□□ -0.77
SNCA-211ENST00000508895 PRPF38AQ8NAV1 312 aaKnown RBP10.22□□□□□ -0.77
SNCA-211ENST00000508895 HMX1Q9NP08 348 aaPredicted RBP10.22□□□□□ -0.77
SNCA-211ENST00000508895 GPCPD1Q9NPB8 672 aa10.22□□□□□ -0.77
SNCA-211ENST00000508895 TCP11L1Q9NUJ3 509 aa10.22□□□□□ -0.77
SNCA-211ENST00000508895 ZSWIM5Q9P217 1185 aa10.22□□□□□ -0.77
SNCA-211ENST00000508895 OGDHLQ9ULD0 1010 aa10.22□□□□□ -0.77
SNCA-211ENST00000508895 PRR12Q9ULL5 1215 aa10.22□□□□□ -0.77
SNCA-211ENST00000508895 CYP21A2P08686 494 aa10.21□□□□□ -0.77
SNCA-211ENST00000508895 GOLGA8HP0CJ92 632 aa10.21□□□□□ -0.77
SNCA-211ENST00000508895 PDHBP11177 359 aa10.21□□□□□ -0.77
SNCA-211ENST00000508895 SLC1A4P43007 532 aa10.21□□□□□ -0.77
SNCA-211ENST00000508895 CNTN2Q02246 1040 aa10.21□□□□□ -0.77
SNCA-211ENST00000508895 MFSD6Q6ZSS7 791 aa10.21□□□□□ -0.77
SNCA-211ENST00000508895 DPP9Q86TI2 863 aa10.21□□□□□ -0.77
SNCA-211ENST00000508895 MMP19Q99542 508 aa10.21□□□□□ -0.77
SNCA-211ENST00000508895 MROH8Q9H579 483 aa10.21□□□□□ -0.77
SNCA-211ENST00000508895 ZNF287Q9HBT7 754 aa10.21□□□□□ -0.77
SNCA-211ENST00000508895 CWC22Q9HCG8 908 aaKnown RBP10.21□□□□□ -0.77
SNCA-211ENST00000508895 ANO2Q9NQ90 1003 aa10.21□□□□□ -0.77
SNCA-211ENST00000508895 GPHNQ9NQX3 736 aaPredicted RBP10.21□□□□□ -0.77
SNCA-211ENST00000508895 HOMER2Q9NSB8 354 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms