RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 LRIT3Q3SXY7 679 aa16.14■□□□□ 0.17
CCHCR1-227ENST00000508852 SNRNP48Q6IEG0 339 aaKnown RBP16.14■□□□□ 0.17
CCHCR1-227ENST00000508852 ZNF467Q7Z7K2 595 aaPredicted RBP16.14■□□□□ 0.17
CCHCR1-227ENST00000508852 RNF180Q86T96 592 aa16.14■□□□□ 0.17
CCHCR1-227ENST00000508852 FAM160B2Q86V87 743 aa16.14■□□□□ 0.17
CCHCR1-227ENST00000508852 TDHQ8IZJ6 230 aa16.14■□□□□ 0.17
CCHCR1-227ENST00000508852 CHST13Q8NET6 341 aa16.14■□□□□ 0.17
CCHCR1-227ENST00000508852 UBE2OQ9C0C9 1292 aaKnown RBP16.14■□□□□ 0.17
CCHCR1-227ENST00000508852 RWDD1Q9H446 243 aaPredicted RBP16.14■□□□□ 0.17
CCHCR1-227ENST00000508852 SYNGAP1Q96PV0 1343 aa16.14■□□□□ 0.17
CCHCR1-227ENST00000508852 SALL3Q9BXA9 1300 aa16.14■□□□□ 0.17
CCHCR1-227ENST00000508852 PLA2G6O60733 806 aa16.13■□□□□ 0.17
CCHCR1-227ENST00000508852 PRDM1O75626 825 aa16.13■□□□□ 0.17
CCHCR1-227ENST00000508852 AKR1A1P14550 325 aa16.13■□□□□ 0.17
CCHCR1-227ENST00000508852 SYN1P17600 705 aa16.13■□□□□ 0.17
CCHCR1-227ENST00000508852 MFAP1P55081 439 aaKnown RBP16.13■□□□□ 0.17
CCHCR1-227ENST00000508852 ALX1Q15699 326 aa16.13■□□□□ 0.17
CCHCR1-227ENST00000508852 C1orf53Q5VUE5 145 aa16.13■□□□□ 0.17
CCHCR1-227ENST00000508852 SLFN13Q68D06 897 aa16.13■□□□□ 0.17
CCHCR1-227ENST00000508852 KIFC2Q96AC6 838 aa16.13■□□□□ 0.17
CCHCR1-227ENST00000508852 GMCL1Q96IK5 515 aa16.13■□□□□ 0.17
CCHCR1-227ENST00000508852 CRBNQ96SW2 442 aa16.13■□□□□ 0.17
CCHCR1-227ENST00000508852 SLC38A10Q9HBR0 1119 aa16.13■□□□□ 0.17
CCHCR1-227ENST00000508852 ANAPC4Q9UJX5 808 aa16.13■□□□□ 0.17
CCHCR1-227ENST00000508852 TSPY2A6NKD2 308 aa16.12■□□□□ 0.17
CCHCR1-227ENST00000508852 NT5C2P49902 561 aa16.12■□□□□ 0.17
CCHCR1-227ENST00000508852 STAT2P52630 851 aa16.12■□□□□ 0.17
CCHCR1-227ENST00000508852 PDE1AP54750 535 aa16.12■□□□□ 0.17
CCHCR1-227ENST00000508852 TKFCQ3LXA3 575 aa16.12■□□□□ 0.17
CCHCR1-227ENST00000508852 GJC2Q5T442 439 aaPredicted RBP16.12■□□□□ 0.17
CCHCR1-227ENST00000508852 MAMDC4Q6UXC1 1216 aa16.12■□□□□ 0.17
CCHCR1-227ENST00000508852 OTUD7AQ8TE49 926 aaPredicted RBP16.12■□□□□ 0.17
CCHCR1-227ENST00000508852 SEC62Q99442 399 aaKnown RBP16.12■□□□□ 0.17
CCHCR1-227ENST00000508852 NUP88Q99567 741 aaPredicted RBP16.12■□□□□ 0.17
CCHCR1-227ENST00000508852 XPNPEP3Q9NQH7 507 aa16.12■□□□□ 0.17
CCHCR1-227ENST00000508852 PGK2P07205 417 aa16.11■□□□□ 0.17
CCHCR1-227ENST00000508852 PCP11498 1178 aaKnown RBP16.11■□□□□ 0.17
CCHCR1-227ENST00000508852 SLC1A4P43007 532 aa16.11■□□□□ 0.17
CCHCR1-227ENST00000508852 LRRC41Q15345 812 aa16.11■□□□□ 0.17
CCHCR1-227ENST00000508852 MCMDC2Q4G0Z9 681 aa16.11■□□□□ 0.17
CCHCR1-227ENST00000508852 SLC39A5Q6ZMH5 540 aa16.11■□□□□ 0.17
CCHCR1-227ENST00000508852 ANKRD35Q8N283 1001 aa16.11■□□□□ 0.17
CCHCR1-227ENST00000508852 STAG1Q8WVM7 1258 aa16.11■□□□□ 0.17
CCHCR1-227ENST00000508852 TSEN34Q9BSV6 310 aaKnown RBP16.11■□□□□ 0.17
CCHCR1-227ENST00000508852 FAM184BQ9ULE4 1060 aa16.11■□□□□ 0.17
CCHCR1-227ENST00000508852 DNAJC25-GNG10A0A024R161 153 aa16.1■□□□□ 0.17
CCHCR1-227ENST00000508852 ORC4O43929 436 aa16.1■□□□□ 0.17
CCHCR1-227ENST00000508852 RTP1P59025 263 aa16.1■□□□□ 0.17
CCHCR1-227ENST00000508852 IKQ13123 557 aaPredicted RBP16.1■□□□□ 0.17
CCHCR1-227ENST00000508852 SNX17Q15036 470 aa16.1■□□□□ 0.17
CCHCR1-227ENST00000508852 PRAMEF19Q5SWL8 479 aa16.1■□□□□ 0.17
CCHCR1-227ENST00000508852 RCSD1Q6JBY9 416 aa16.1■□□□□ 0.17
CCHCR1-227ENST00000508852 CPXCR1Q8N123 301 aa16.1■□□□□ 0.17
CCHCR1-227ENST00000508852 LRRC47Q8N1G4 583 aaKnown RBP16.1■□□□□ 0.17
CCHCR1-227ENST00000508852 PNMA2Q9UL42 364 aa16.1■□□□□ 0.17
CCHCR1-227ENST00000508852 STX8Q9UNK0 236 aa16.1■□□□□ 0.17
CCHCR1-227ENST00000508852 SMCHD1A6NHR9 2005 aa16.1■□□□□ 0.17
CCHCR1-227ENST00000508852 ZMYM6O95789 1325 aa16.1■□□□□ 0.17
CCHCR1-227ENST00000508852 TMEM232C9JQI7 657 aa16.09■□□□□ 0.17
CCHCR1-227ENST00000508852 MYCNP04198 464 aaPredicted RBP16.09■□□□□ 0.17
CCHCR1-227ENST00000508852 ATN1P54259 1190 aaPredicted RBP16.09■□□□□ 0.17
CCHCR1-227ENST00000508852 FAM47AQ5JRC9 791 aa16.09■□□□□ 0.17
CCHCR1-227ENST00000508852 NUP133Q8WUM0 1156 aa16.09■□□□□ 0.17
CCHCR1-227ENST00000508852 ABHD16BQ9H3Z7 469 aa16.09■□□□□ 0.17
CCHCR1-227ENST00000508852 SPC25Q9HBM1 224 aa16.09■□□□□ 0.17
CCHCR1-227ENST00000508852 ISY1Q9ULR0 285 aaKnown RBP16.09■□□□□ 0.17
CCHCR1-227ENST00000508852 PHF24Q9UPV7 400 aa16.09■□□□□ 0.17
CCHCR1-227ENST00000508852 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.09■□□□□ 0.17
CCHCR1-227ENST00000508852 MOXD2PA6NHM9 499 aa16.08■□□□□ 0.16
CCHCR1-227ENST00000508852 RANBP6O60518 1105 aaKnown RBP16.08■□□□□ 0.16
CCHCR1-227ENST00000508852 FGRP09769 529 aa16.08■□□□□ 0.16
CCHCR1-227ENST00000508852 ZNF865P0CJ78 1059 aaPredicted RBP16.08■□□□□ 0.16
CCHCR1-227ENST00000508852 ACAD9Q9H845 621 aa16.08■□□□□ 0.16
CCHCR1-227ENST00000508852 RAVER2Q9HCJ3 691 aaKnown RBP16.08■□□□□ 0.16
CCHCR1-227ENST00000508852 ATP11BQ9Y2G3 1177 aa16.08■□□□□ 0.16
CCHCR1-227ENST00000508852 SZT2Q5T011 3432 aa16.07■□□□□ 0.16
CCHCR1-227ENST00000508852 TRIM6-TRIM34B2RNG4 842 aa16.07■□□□□ 0.16
CCHCR1-227ENST00000508852 ADCYAP1R1P41586 468 aa16.07■□□□□ 0.16
CCHCR1-227ENST00000508852 SLC4A3P48751 1232 aa16.07■□□□□ 0.16
CCHCR1-227ENST00000508852 ANO1Q5XXA6 986 aa16.07■□□□□ 0.16
CCHCR1-227ENST00000508852 SMC5Q8IY18 1101 aa16.07■□□□□ 0.16
CCHCR1-227ENST00000508852 DCAF4Q8WV16 495 aa16.07■□□□□ 0.16
CCHCR1-227ENST00000508852 RNF41Q9H4P4 317 aaPredicted RBP16.07■□□□□ 0.16
CCHCR1-227ENST00000508852 TCP11L1Q9NUJ3 509 aa16.07■□□□□ 0.16
CCHCR1-227ENST00000508852 RIPK3Q9Y572 518 aa16.07■□□□□ 0.16
CCHCR1-227ENST00000508852 TACC3Q9Y6A5 838 aa16.07■□□□□ 0.16
CCHCR1-227ENST00000508852 DNAH12Q6ZR08 3092 aa16.07■□□□□ 0.16
CCHCR1-227ENST00000508852 ASB14A6NK59 587 aa16.06■□□□□ 0.16
CCHCR1-227ENST00000508852 HIP1O00291 1037 aa16.06■□□□□ 0.16
CCHCR1-227ENST00000508852 DUSP11O75319 330 aaKnown RBP16.06■□□□□ 0.16
CCHCR1-227ENST00000508852 NOVP48745 357 aa16.06■□□□□ 0.16
CCHCR1-227ENST00000508852 MDM2Q00987 491 aaPredicted RBP16.06■□□□□ 0.16
CCHCR1-227ENST00000508852 CTDSPL2Q05D32 466 aa16.06■□□□□ 0.16
CCHCR1-227ENST00000508852 ACVR2BQ13705 512 aa16.06■□□□□ 0.16
CCHCR1-227ENST00000508852 CCDC129Q6ZRS4 1044 aa16.06■□□□□ 0.16
CCHCR1-227ENST00000508852 PCSK9Q8NBP7 692 aaKnown RBP16.06■□□□□ 0.16
CCHCR1-227ENST00000508852 TTC14Q96N46 770 aa16.06■□□□□ 0.16
CCHCR1-227ENST00000508852 OSBPL3Q9H4L5 887 aa16.06■□□□□ 0.16
CCHCR1-227ENST00000508852 MROH7Q68CQ1 1323 aa16.05■□□□□ 0.16
CCHCR1-227ENST00000508852 POTEB2H3BUK9 544 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms