RNA–Protein interactions for RNA: ENST00000508715.5

PTPN20-220, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-220ENST00000508715 ALDH8A1Q9H2A2 487 aaPredicted RBP12.1□□□□□ -0.47
PTPN20-220ENST00000508715 ZFYVE28Q9HCC9 887 aa12.1□□□□□ -0.47
PTPN20-220ENST00000508715 ZNF536O15090 1300 aa12.1□□□□□ -0.47
PTPN20-220ENST00000508715 MYPNQ86TC9 1320 aa12.1□□□□□ -0.47
PTPN20-220ENST00000508715 KLF18A0A0U1RQI7 1052 aa12.09□□□□□ -0.47
PTPN20-220ENST00000508715 ERICH2A1L162 156 aa12.09□□□□□ -0.47
PTPN20-220ENST00000508715 GPR25O00155 361 aa12.09□□□□□ -0.47
PTPN20-220ENST00000508715 VWA5AO00534 786 aa12.09□□□□□ -0.47
PTPN20-220ENST00000508715 DDAH1O94760 285 aa12.09□□□□□ -0.47
PTPN20-220ENST00000508715 TAL1P17542 331 aaPredicted RBP12.09□□□□□ -0.47
PTPN20-220ENST00000508715 OSBPP22059 807 aa12.09□□□□□ -0.47
PTPN20-220ENST00000508715 CDC27P30260 824 aa12.09□□□□□ -0.47
PTPN20-220ENST00000508715 AK2P54819 239 aa12.09□□□□□ -0.47
PTPN20-220ENST00000508715 SNAP25P60880 206 aa12.09□□□□□ -0.47
PTPN20-220ENST00000508715 PABPC4Q13310 644 aaKnown RBP eCLIP12.09□□□□□ -0.47
PTPN20-220ENST00000508715 CCDC96Q2M329 555 aa12.09□□□□□ -0.47
PTPN20-220ENST00000508715 ANKRD13CQ8N6S4 541 aa12.09□□□□□ -0.47
PTPN20-220ENST00000508715 SLF1Q9BQI6 1058 aa12.09□□□□□ -0.47
PTPN20-220ENST00000508715 PDRG1Q9NUG6 133 aa12.09□□□□□ -0.47
PTPN20-220ENST00000508715 MORF4L1Q9UBU8 362 aa12.09□□□□□ -0.47
PTPN20-220ENST00000508715 FEM1BQ9UK73 627 aa12.09□□□□□ -0.47
PTPN20-220ENST00000508715 PNMA3Q9UL41 463 aa12.09□□□□□ -0.47
PTPN20-220ENST00000508715 PRR12Q9ULL5 1215 aa12.09□□□□□ -0.47
PTPN20-220ENST00000508715 NID2Q14112 1375 aa12.08□□□□□ -0.48
PTPN20-220ENST00000508715 CCDC69A6NI79 296 aa12.08□□□□□ -0.48
PTPN20-220ENST00000508715 PLEKHA8P1O95397 391 aa12.08□□□□□ -0.48
PTPN20-220ENST00000508715 CD2BP2O95400 341 aaKnown RBP12.08□□□□□ -0.48
PTPN20-220ENST00000508715 LARGE1O95461 756 aa12.08□□□□□ -0.48
PTPN20-220ENST00000508715 PARP1P09874 1014 aaKnown RBP12.08□□□□□ -0.48
PTPN20-220ENST00000508715 NEK4P51957 841 aa12.08□□□□□ -0.48
PTPN20-220ENST00000508715 STAT2P52630 851 aa12.08□□□□□ -0.48
PTPN20-220ENST00000508715 FUT2Q10981 343 aa12.08□□□□□ -0.48
PTPN20-220ENST00000508715 TMEM132BQ14DG7 1078 aa12.08□□□□□ -0.48
PTPN20-220ENST00000508715 ASPRV1Q53RT3 343 aa12.08□□□□□ -0.48
PTPN20-220ENST00000508715 NOM1Q5C9Z4 860 aaKnown RBP12.08□□□□□ -0.48
PTPN20-220ENST00000508715 CATIPQ7Z7H3 387 aa12.08□□□□□ -0.48
PTPN20-220ENST00000508715 CCDC144CPQ8IYA2 1237 aa12.08□□□□□ -0.48
PTPN20-220ENST00000508715 CMTR1Q8N1G2 835 aaKnown RBP12.08□□□□□ -0.48
PTPN20-220ENST00000508715 TMTC2Q8N394 836 aa12.08□□□□□ -0.48
PTPN20-220ENST00000508715 PRPF38AQ8NAV1 312 aaKnown RBP12.08□□□□□ -0.48
PTPN20-220ENST00000508715 NUP133Q8WUM0 1156 aa12.08□□□□□ -0.48
PTPN20-220ENST00000508715 KIFC2Q96AC6 838 aa12.08□□□□□ -0.48
PTPN20-220ENST00000508715 MTMR8Q96EF0 704 aa12.08□□□□□ -0.48
PTPN20-220ENST00000508715 MAP3K14Q99558 947 aa12.08□□□□□ -0.48
PTPN20-220ENST00000508715 ARHGAP39Q9C0H5 1083 aa12.08□□□□□ -0.48
PTPN20-220ENST00000508715 SLC38A10Q9HBR0 1119 aa12.08□□□□□ -0.48
PTPN20-220ENST00000508715 HOXC10Q9NYD6 342 aa12.08□□□□□ -0.48
PTPN20-220ENST00000508715 ZNF214Q9UL59 606 aaPredicted RBP12.08□□□□□ -0.48
PTPN20-220ENST00000508715 TPCN1Q9ULQ1 816 aa12.08□□□□□ -0.48
PTPN20-220ENST00000508715 PLXNA1Q9UIW2 1896 aa12.08□□□□□ -0.48
PTPN20-220ENST00000508715 MCM3APO60318 1980 aa12.07□□□□□ -0.48
PTPN20-220ENST00000508715 KLRF2D3W0D1 207 aa12.07□□□□□ -0.48
PTPN20-220ENST00000508715 PDIA3P30101 505 aaKnown RBP12.07□□□□□ -0.48
PTPN20-220ENST00000508715 GCLCP48506 637 aaPredicted RBP12.07□□□□□ -0.48
PTPN20-220ENST00000508715 ERVK-9P63128 1117 aa12.07□□□□□ -0.48
PTPN20-220ENST00000508715 ERVK-24P63145 666 aa12.07□□□□□ -0.48
PTPN20-220ENST00000508715 C1QBPQ07021 282 aaKnown RBP12.07□□□□□ -0.48
PTPN20-220ENST00000508715 ST3GAL1Q11201 340 aa12.07□□□□□ -0.48
PTPN20-220ENST00000508715 FAM110CQ1W6H9 321 aa12.07□□□□□ -0.48
PTPN20-220ENST00000508715 GPATCH4Q5T3I0 446 aaKnown RBP12.07□□□□□ -0.48
PTPN20-220ENST00000508715 SYDE2Q5VT97 1194 aa12.07□□□□□ -0.48
PTPN20-220ENST00000508715 SAMD1Q6SPF0 538 aaPredicted RBP12.07□□□□□ -0.48
PTPN20-220ENST00000508715 NFXL1Q6ZNB6 911 aa12.07□□□□□ -0.48
PTPN20-220ENST00000508715 FAM160B2Q86V87 743 aa12.07□□□□□ -0.48
PTPN20-220ENST00000508715 MICU3Q86XE3 530 aa12.07□□□□□ -0.48
PTPN20-220ENST00000508715 ADGRF4Q8IZF3 695 aa12.07□□□□□ -0.48
PTPN20-220ENST00000508715 SRBD1Q8N5C6 995 aaKnown RBP12.07□□□□□ -0.48
PTPN20-220ENST00000508715 FANCBQ8NB91 859 aa12.07□□□□□ -0.48
PTPN20-220ENST00000508715 SMCR8Q8TEV9 937 aaPredicted RBP12.07□□□□□ -0.48
PTPN20-220ENST00000508715 ZNF296Q8WUU4 475 aaPredicted RBP12.07□□□□□ -0.48
PTPN20-220ENST00000508715 PAGR1Q9BTK6 254 aa12.07□□□□□ -0.48
PTPN20-220ENST00000508715 PORCNQ9H237 461 aa12.07□□□□□ -0.48
PTPN20-220ENST00000508715 RIOX1Q9H6W3 641 aa12.07□□□□□ -0.48
PTPN20-220ENST00000508715 JMJD4Q9H9V9 463 aa12.07□□□□□ -0.48
PTPN20-220ENST00000508715 RABGAP1Q9Y3P9 1069 aa12.07□□□□□ -0.48
PTPN20-220ENST00000508715 RIPK3Q9Y572 518 aa12.07□□□□□ -0.48
PTPN20-220ENST00000508715 SLC12A7Q9Y666 1083 aa12.07□□□□□ -0.48
PTPN20-220ENST00000508715 ZBTB43O43298 467 aa12.06□□□□□ -0.48
PTPN20-220ENST00000508715 PPP1R11O60927 126 aaPredicted RBP12.06□□□□□ -0.48
PTPN20-220ENST00000508715 DTNBO60941 627 aa12.06□□□□□ -0.48
PTPN20-220ENST00000508715 ADD1P35611 737 aaKnown RBP12.06□□□□□ -0.48
PTPN20-220ENST00000508715 LBX1P52954 281 aa12.06□□□□□ -0.48
PTPN20-220ENST00000508715 NTRK3Q16288 839 aa12.06□□□□□ -0.48
PTPN20-220ENST00000508715 TMTC3Q6ZXV5 915 aa12.06□□□□□ -0.48
PTPN20-220ENST00000508715 CHURC1Q8WUH1 139 aa12.06□□□□□ -0.48
PTPN20-220ENST00000508715 MOV10L1Q9BXT6 1211 aaKnown RBP12.06□□□□□ -0.48
PTPN20-220ENST00000508715 RANBP17Q9H2T7 1088 aaKnown RBP12.06□□□□□ -0.48
PTPN20-220ENST00000508715 RAVER2Q9HCJ3 691 aaKnown RBP12.06□□□□□ -0.48
PTPN20-220ENST00000508715 ATP2A1O14983 1001 aa12.05□□□□□ -0.48
PTPN20-220ENST00000508715 ECM2O94769 699 aaPredicted RBP12.05□□□□□ -0.48
PTPN20-220ENST00000508715 RCAN1P53805 252 aa12.05□□□□□ -0.48
PTPN20-220ENST00000508715 CCT2P78371 535 aaKnown RBP12.05□□□□□ -0.48
PTPN20-220ENST00000508715 SP3Q02447 781 aa12.05□□□□□ -0.48
PTPN20-220ENST00000508715 ME3Q16798 604 aa12.05□□□□□ -0.48
PTPN20-220ENST00000508715 MB21D1Q8N884 522 aa12.05□□□□□ -0.48
PTPN20-220ENST00000508715 CD99L2Q8TCZ2 262 aa12.05□□□□□ -0.48
PTPN20-220ENST00000508715 ZNF274Q96GC6 653 aaPredicted RBP12.05□□□□□ -0.48
PTPN20-220ENST00000508715 TRIM47Q96LD4 638 aa12.05□□□□□ -0.48
PTPN20-220ENST00000508715 AGBL1Q96MI9 1066 aa12.05□□□□□ -0.48
PTPN20-220ENST00000508715 BEGAINQ9BUH8 593 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms