RNA–Protein interactions for RNA: ENST00000508692.1

COL4A3BP-205, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-205ENST00000508692 CYP7A1P22680 504 aa5.51□□□□□ -1.53
COL4A3BP-205ENST00000508692 ANKRD39Q53RE8 183 aa5.51□□□□□ -1.53
COL4A3BP-205ENST00000508692 FYB2Q5VWT5 728 aa5.51□□□□□ -1.53
COL4A3BP-205ENST00000508692 LETMD1Q6P1Q0 360 aa5.51□□□□□ -1.53
COL4A3BP-205ENST00000508692 ARHGAP27Q6ZUM4 889 aa5.51□□□□□ -1.53
COL4A3BP-205ENST00000508692 SYDE1Q6ZW31 735 aaPredicted RBP5.51□□□□□ -1.53
COL4A3BP-205ENST00000508692 JAZF1Q86VZ6 243 aa5.51□□□□□ -1.53
COL4A3BP-205ENST00000508692 ANKLE2Q86XL3 938 aa5.51□□□□□ -1.53
COL4A3BP-205ENST00000508692 SIAH1Q8IUQ4 282 aa5.51□□□□□ -1.53
COL4A3BP-205ENST00000508692 BAHD1Q8TBE0 780 aaPredicted RBP5.51□□□□□ -1.53
COL4A3BP-205ENST00000508692 THAP3Q8WTV1 239 aaPredicted RBP5.51□□□□□ -1.53
COL4A3BP-205ENST00000508692 COX4I2Q96KJ9 171 aa5.51□□□□□ -1.53
COL4A3BP-205ENST00000508692 RNPC3Q96LT9 517 aaKnown RBP5.51□□□□□ -1.53
COL4A3BP-205ENST00000508692 PPP1R16BQ96T49 567 aa5.51□□□□□ -1.53
COL4A3BP-205ENST00000508692 DPH2Q9BQC3 489 aaPredicted RBP5.51□□□□□ -1.53
COL4A3BP-205ENST00000508692 TMX1Q9H3N1 280 aa5.51□□□□□ -1.53
COL4A3BP-205ENST00000508692 MRPL42Q9Y6G3 142 aaKnown RBP5.51□□□□□ -1.53
COL4A3BP-205ENST00000508692 TMEM265A0A087WTH1 108 aa5.5□□□□□ -1.53
COL4A3BP-205ENST00000508692 ANKRD34BA5PLL1 514 aa5.5□□□□□ -1.53
COL4A3BP-205ENST00000508692 FAM86C2PA6NEL3 165 aa5.5□□□□□ -1.53
COL4A3BP-205ENST00000508692 HMGB1P09429 215 aaKnown RBP5.5□□□□□ -1.53
COL4A3BP-205ENST00000508692 POLR2BP30876 1174 aaKnown RBP5.5□□□□□ -1.53
COL4A3BP-205ENST00000508692 TCEAL1Q15170 157 aa5.5□□□□□ -1.53
COL4A3BP-205ENST00000508692 LONRF2Q1L5Z9 754 aa5.5□□□□□ -1.53
COL4A3BP-205ENST00000508692 ZC3H12BQ5HYM0 836 aaKnown RBP5.5□□□□□ -1.53
COL4A3BP-205ENST00000508692 UBE3DQ7Z6J8 389 aa5.5□□□□□ -1.53
COL4A3BP-205ENST00000508692 TMEM192Q8IY95 271 aa5.5□□□□□ -1.53
COL4A3BP-205ENST00000508692 KLHL6Q8WZ60 621 aa5.5□□□□□ -1.53
COL4A3BP-205ENST00000508692 SGSM3Q96HU1 749 aa5.5□□□□□ -1.53
COL4A3BP-205ENST00000508692 APBA2Q99767 749 aa5.5□□□□□ -1.53
COL4A3BP-205ENST00000508692 CWC22Q9HCG8 908 aaKnown RBP5.5□□□□□ -1.53
COL4A3BP-205ENST00000508692 PRDM10Q9NQV6 1147 aa5.5□□□□□ -1.53
COL4A3BP-205ENST00000508692 PCDHB10Q9UN67 800 aa5.5□□□□□ -1.53
COL4A3BP-205ENST00000508692 B2RBV5 119 aa5.49□□□□□ -1.53
COL4A3BP-205ENST00000508692 SUSD5O60279 629 aa5.49□□□□□ -1.53
COL4A3BP-205ENST00000508692 KRT1P04264 644 aa5.49□□□□□ -1.53
COL4A3BP-205ENST00000508692 C1QTNF9P0C862 333 aa5.49□□□□□ -1.53
COL4A3BP-205ENST00000508692 SSRP1Q08945 709 aaKnown RBP5.49□□□□□ -1.53
COL4A3BP-205ENST00000508692 TAF7LQ5H9L4 462 aa5.49□□□□□ -1.53
COL4A3BP-205ENST00000508692 EGFLAMQ63HQ2 1017 aa5.49□□□□□ -1.53
COL4A3BP-205ENST00000508692 HEATR6Q6AI08 1181 aaKnown RBP5.49□□□□□ -1.53
COL4A3BP-205ENST00000508692 PRR23BQ6ZRT6 265 aa5.49□□□□□ -1.53
COL4A3BP-205ENST00000508692 HOMER1Q86YM7 354 aa5.49□□□□□ -1.53
COL4A3BP-205ENST00000508692 CCDC144CPQ8IYA2 1237 aa5.49□□□□□ -1.53
COL4A3BP-205ENST00000508692 LRRC47Q8N1G4 583 aaKnown RBP5.49□□□□□ -1.53
COL4A3BP-205ENST00000508692 NLGN1Q8N2Q7 840 aa5.49□□□□□ -1.53
COL4A3BP-205ENST00000508692 JMYQ8N9B5 988 aa5.49□□□□□ -1.53
COL4A3BP-205ENST00000508692 DNAJB8Q8NHS0 232 aa5.49□□□□□ -1.53
COL4A3BP-205ENST00000508692 SH3TC2Q8TF17 1288 aa5.49□□□□□ -1.53
COL4A3BP-205ENST00000508692 XAGE3Q8WTP9 111 aa5.49□□□□□ -1.53
COL4A3BP-205ENST00000508692 PPP1R13LQ8WUF5 828 aa5.49□□□□□ -1.53
COL4A3BP-205ENST00000508692 MIPEPQ99797 713 aa5.49□□□□□ -1.53
COL4A3BP-205ENST00000508692 DUSP23Q9BVJ7 150 aa5.49□□□□□ -1.53
COL4A3BP-205ENST00000508692 ASPNQ9BXN1 380 aa5.49□□□□□ -1.53
COL4A3BP-205ENST00000508692 MKNK2Q9HBH9 465 aa5.49□□□□□ -1.53
COL4A3BP-205ENST00000508692 ZMYM5Q9UJ78 669 aa5.49□□□□□ -1.53
COL4A3BP-205ENST00000508692 CTNND2Q9UQB3 1225 aa5.49□□□□□ -1.53
COL4A3BP-205ENST00000508692 KDM2BQ8NHM5 1336 aa5.48□□□□□ -1.53
COL4A3BP-205ENST00000508692 IKZF1Q13422 519 aa5.48□□□□□ -1.53
COL4A3BP-205ENST00000508692 C2orf27AQ580R0 203 aa5.48□□□□□ -1.53
COL4A3BP-205ENST00000508692 NBPF12Q5TAG4 269 aaPredicted RBP5.48□□□□□ -1.53
COL4A3BP-205ENST00000508692 MRM1Q6IN84 353 aaKnown RBP5.48□□□□□ -1.53
COL4A3BP-205ENST00000508692 SYNPOQ8N3V7 929 aa5.48□□□□□ -1.53
COL4A3BP-205ENST00000508692 LILRB2Q8N423 598 aa5.48□□□□□ -1.53
COL4A3BP-205ENST00000508692 RNF141Q8WVD5 230 aa5.48□□□□□ -1.53
COL4A3BP-205ENST00000508692 APPBP2Q92624 585 aa5.48□□□□□ -1.53
COL4A3BP-205ENST00000508692 KREMEN1Q96MU8 473 aa5.48□□□□□ -1.53
COL4A3BP-205ENST00000508692 PUS7Q96PZ0 661 aaKnown RBP5.48□□□□□ -1.53
COL4A3BP-205ENST00000508692 SLC26A8Q96RN1 970 aa5.48□□□□□ -1.53
COL4A3BP-205ENST00000508692 HAUS7Q99871 368 aa5.48□□□□□ -1.53
COL4A3BP-205ENST00000508692 SPATA9Q9BWV2 254 aa5.48□□□□□ -1.53
COL4A3BP-205ENST00000508692 GBP3Q9H0R5 595 aa5.48□□□□□ -1.53
COL4A3BP-205ENST00000508692 A0A087WZG4 1122 aa5.47□□□□□ -1.53
COL4A3BP-205ENST00000508692 CCDC163A0A0D9SF12 145 aa5.47□□□□□ -1.53
COL4A3BP-205ENST00000508692 ANKRD62A6NC57 917 aa5.47□□□□□ -1.53
COL4A3BP-205ENST00000508692 CDC45O75419 566 aa5.47□□□□□ -1.53
COL4A3BP-205ENST00000508692 PPM1BO75688 479 aa5.47□□□□□ -1.53
COL4A3BP-205ENST00000508692 SLITRK5O94991 958 aa5.47□□□□□ -1.53
COL4A3BP-205ENST00000508692 TP53P04637 393 aaPredicted RBP5.47□□□□□ -1.53
COL4A3BP-205ENST00000508692 INHBBP09529 407 aa5.47□□□□□ -1.53
COL4A3BP-205ENST00000508692 ZP2Q05996 745 aa5.47□□□□□ -1.53
COL4A3BP-205ENST00000508692 SLC10A6Q3KNW5 377 aa5.47□□□□□ -1.53
COL4A3BP-205ENST00000508692 PLEKHG4Q58EX7 1191 aa5.47□□□□□ -1.53
COL4A3BP-205ENST00000508692 KRTAP5-3Q6L8H2 238 aa5.47□□□□□ -1.53
COL4A3BP-205ENST00000508692 ZSWIM2Q8NEG5 633 aa5.47□□□□□ -1.53
COL4A3BP-205ENST00000508692 MKRN2Q9H000 416 aaKnown RBP5.47□□□□□ -1.53
COL4A3BP-205ENST00000508692 SLKQ9H2G2 1235 aaPredicted RBP5.47□□□□□ -1.53
COL4A3BP-205ENST00000508692 RAPGEFL1Q9UHV5 662 aa5.47□□□□□ -1.53
COL4A3BP-205ENST00000508692 C9IYK1 514 aa5.46□□□□□ -1.54
COL4A3BP-205ENST00000508692 GLI1P08151 1106 aa5.46□□□□□ -1.54
COL4A3BP-205ENST00000508692 AUHQ13825 339 aaKnown RBP5.46□□□□□ -1.54
COL4A3BP-205ENST00000508692 SV2CQ496J9 727 aa5.46□□□□□ -1.54
COL4A3BP-205ENST00000508692 AXDND1Q5T1B0 1012 aaPredicted RBP5.46□□□□□ -1.54
COL4A3BP-205ENST00000508692 MPZL3Q6UWV2 235 aa5.46□□□□□ -1.54
COL4A3BP-205ENST00000508692 SPATC1Q76KD6 591 aa5.46□□□□□ -1.54
COL4A3BP-205ENST00000508692 ADAT2Q7Z6V5 191 aaKnown RBP5.46□□□□□ -1.54
COL4A3BP-205ENST00000508692 CDH24Q86UP0 819 aa5.46□□□□□ -1.54
COL4A3BP-205ENST00000508692 PPFIBP1Q86W92 1011 aa5.46□□□□□ -1.54
COL4A3BP-205ENST00000508692 C7orf61Q8IZ16 206 aa5.46□□□□□ -1.54
COL4A3BP-205ENST00000508692 CRACR2BQ8N4Y2 399 aaPredicted RBP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms