RNA–Protein interactions for RNA: ENST00000508679.5

CALCOCO2-211, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2 BASIC

Gene CALCOCO2, Length 1,396 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-211ENST00000508679 PRPF38AQ8NAV1 312 aaKnown RBP17.48■□□□□ 0.39
CALCOCO2-211ENST00000508679 SLF1Q9BQI6 1058 aa17.48■□□□□ 0.39
CALCOCO2-211ENST00000508679 TANGO6Q9C0B7 1094 aa17.48■□□□□ 0.39
CALCOCO2-211ENST00000508679 UPF2Q9HAU5 1272 aaKnown RBP17.48■□□□□ 0.39
CALCOCO2-211ENST00000508679 ZFYVE28Q9HCC9 887 aa17.48■□□□□ 0.39
CALCOCO2-211ENST00000508679 HOXC10Q9NYD6 342 aa17.48■□□□□ 0.39
CALCOCO2-211ENST00000508679 PRR12Q9ULL5 1215 aa17.48■□□□□ 0.39
CALCOCO2-211ENST00000508679 MTMR7Q9Y216 660 aa17.48■□□□□ 0.39
CALCOCO2-211ENST00000508679 CASP8AP2Q9UKL3 1982 aa17.47■□□□□ 0.39
CALCOCO2-211ENST00000508679 KLF18A0A0U1RQI7 1052 aa17.47■□□□□ 0.39
CALCOCO2-211ENST00000508679 CCDC69A6NI79 296 aa17.47■□□□□ 0.39
CALCOCO2-211ENST00000508679 VWA5AO00534 786 aa17.47■□□□□ 0.39
CALCOCO2-211ENST00000508679 RXRAP19793 462 aa17.47■□□□□ 0.39
CALCOCO2-211ENST00000508679 CDC27P30260 824 aa17.47■□□□□ 0.39
CALCOCO2-211ENST00000508679 SLC16A2P36021 539 aa17.47■□□□□ 0.39
CALCOCO2-211ENST00000508679 IRX3P78415 501 aaPredicted RBP17.47■□□□□ 0.39
CALCOCO2-211ENST00000508679 FAM160B2Q86V87 743 aa17.47■□□□□ 0.39
CALCOCO2-211ENST00000508679 RAB11FIP4Q86YS3 637 aa17.47■□□□□ 0.39
CALCOCO2-211ENST00000508679 FANCBQ8NB91 859 aa17.47■□□□□ 0.39
CALCOCO2-211ENST00000508679 LARP6Q9BRS8 491 aaKnown RBP17.47■□□□□ 0.39
CALCOCO2-211ENST00000508679 RIOX1Q9H6W3 641 aa17.47■□□□□ 0.39
CALCOCO2-211ENST00000508679 SLC38A10Q9HBR0 1119 aa17.47■□□□□ 0.39
CALCOCO2-211ENST00000508679 GPCPD1Q9NPB8 672 aa17.47■□□□□ 0.39
CALCOCO2-211ENST00000508679 ZNF214Q9UL59 606 aaPredicted RBP17.47■□□□□ 0.39
CALCOCO2-211ENST00000508679 TPCN1Q9ULQ1 816 aa17.47■□□□□ 0.39
CALCOCO2-211ENST00000508679 SLC12A7Q9Y666 1083 aa17.47■□□□□ 0.39
CALCOCO2-211ENST00000508679 RAD21O60216 631 aa17.46■□□□□ 0.39
CALCOCO2-211ENST00000508679 CD2BP2O95400 341 aaKnown RBP17.46■□□□□ 0.39
CALCOCO2-211ENST00000508679 PARP1P09874 1014 aaKnown RBP17.46■□□□□ 0.39
CALCOCO2-211ENST00000508679 CTGFP29279 349 aa17.46■□□□□ 0.39
CALCOCO2-211ENST00000508679 GCLCP48506 637 aaPredicted RBP17.46■□□□□ 0.39
CALCOCO2-211ENST00000508679 STAT2P52630 851 aa17.46■□□□□ 0.39
CALCOCO2-211ENST00000508679 TMEM132BQ14DG7 1078 aa17.46■□□□□ 0.39
CALCOCO2-211ENST00000508679 RABEP1Q15276 862 aa17.46■□□□□ 0.39
CALCOCO2-211ENST00000508679 ZNF274Q96GC6 653 aaPredicted RBP17.46■□□□□ 0.39
CALCOCO2-211ENST00000508679 UBA5Q9GZZ9 404 aa17.46■□□□□ 0.39
CALCOCO2-211ENST00000508679 RANBP17Q9H2T7 1088 aaKnown RBP17.46■□□□□ 0.39
CALCOCO2-211ENST00000508679 CPA4Q9UI42 421 aa17.46■□□□□ 0.39
CALCOCO2-211ENST00000508679 KLRF2D3W0D1 207 aa17.45■□□□□ 0.38
CALCOCO2-211ENST00000508679 ATP2A1O14983 1001 aa17.45■□□□□ 0.38
CALCOCO2-211ENST00000508679 FOXN1O15353 648 aa17.45■□□□□ 0.38
CALCOCO2-211ENST00000508679 ZBTB43O43298 467 aa17.45■□□□□ 0.38
CALCOCO2-211ENST00000508679 PLEKHA8P1O95397 391 aa17.45■□□□□ 0.38
CALCOCO2-211ENST00000508679 LARGE1O95461 756 aa17.45■□□□□ 0.38
CALCOCO2-211ENST00000508679 CALM1P0DP23 149 aa17.45■□□□□ 0.38
CALCOCO2-211ENST00000508679 CALM2P0DP24 149 aa17.45■□□□□ 0.38
CALCOCO2-211ENST00000508679 CALM3P0DP25 149 aa17.45■□□□□ 0.38
CALCOCO2-211ENST00000508679 SMARCA1P28370 1054 aa17.45■□□□□ 0.38
CALCOCO2-211ENST00000508679 ST3GAL1Q11201 340 aa17.45■□□□□ 0.38
CALCOCO2-211ENST00000508679 NTRK3Q16288 839 aa17.45■□□□□ 0.38
CALCOCO2-211ENST00000508679 FAM110CQ1W6H9 321 aa17.45■□□□□ 0.38
CALCOCO2-211ENST00000508679 CCDC96Q2M329 555 aa17.45■□□□□ 0.38
CALCOCO2-211ENST00000508679 SYDE2Q5VT97 1194 aa17.45■□□□□ 0.38
CALCOCO2-211ENST00000508679 NFXL1Q6ZNB6 911 aa17.45■□□□□ 0.38
CALCOCO2-211ENST00000508679 SRBD1Q8N5C6 995 aaKnown RBP17.45■□□□□ 0.38
CALCOCO2-211ENST00000508679 CHURC1Q8WUH1 139 aa17.45■□□□□ 0.38
CALCOCO2-211ENST00000508679 JMJD4Q9H9V9 463 aa17.45■□□□□ 0.38
CALCOCO2-211ENST00000508679 RABGAP1Q9Y3P9 1069 aa17.45■□□□□ 0.38
CALCOCO2-211ENST00000508679 LCTP09848 1927 aa17.45■□□□□ 0.38
CALCOCO2-211ENST00000508679 GPR25O00155 361 aa17.44■□□□□ 0.38
CALCOCO2-211ENST00000508679 HSPA1AP0DMV8 641 aaKnown RBP17.44■□□□□ 0.38
CALCOCO2-211ENST00000508679 HSPA1BP0DMV9 641 aaKnown RBP17.44■□□□□ 0.38
CALCOCO2-211ENST00000508679 HSPA8P11142 646 aaKnown RBP17.44■□□□□ 0.38
CALCOCO2-211ENST00000508679 TMTC3Q6ZXV5 915 aa17.44■□□□□ 0.38
CALCOCO2-211ENST00000508679 MICU3Q86XE3 530 aa17.44■□□□□ 0.38
CALCOCO2-211ENST00000508679 ADGRF4Q8IZF3 695 aa17.44■□□□□ 0.38
CALCOCO2-211ENST00000508679 GTF3C2Q8WUA4 911 aaPredicted RBP17.44■□□□□ 0.38
CALCOCO2-211ENST00000508679 NUP133Q8WUM0 1156 aa17.44■□□□□ 0.38
CALCOCO2-211ENST00000508679 TSKSQ9UJT2 592 aa17.44■□□□□ 0.38
CALCOCO2-211ENST00000508679 FDX1P10109 184 aa17.43■□□□□ 0.38
CALCOCO2-211ENST00000508679 ADD1P35611 737 aaKnown RBP17.43■□□□□ 0.38
CALCOCO2-211ENST00000508679 ERVK-9P63128 1117 aa17.43■□□□□ 0.38
CALCOCO2-211ENST00000508679 ERVK-24P63145 666 aa17.43■□□□□ 0.38
CALCOCO2-211ENST00000508679 ME3Q16798 604 aa17.43■□□□□ 0.38
CALCOCO2-211ENST00000508679 CCDC144CPQ8IYA2 1237 aa17.43■□□□□ 0.38
CALCOCO2-211ENST00000508679 ANKRD13CQ8N6S4 541 aa17.43■□□□□ 0.38
CALCOCO2-211ENST00000508679 MB21D1Q8N884 522 aa17.43■□□□□ 0.38
CALCOCO2-211ENST00000508679 IL27Q8NEV9 243 aa17.43■□□□□ 0.38
CALCOCO2-211ENST00000508679 KIFC2Q96AC6 838 aa17.43■□□□□ 0.38
CALCOCO2-211ENST00000508679 SPZ1Q9BXG8 430 aa17.43■□□□□ 0.38
CALCOCO2-211ENST00000508679 ZNF236Q9UL36 1845 aa17.43■□□□□ 0.38
CALCOCO2-211ENST00000508679 PFKFB2O60825 505 aa17.42■□□□□ 0.38
CALCOCO2-211ENST00000508679 PPP1R11O60927 126 aaPredicted RBP17.42■□□□□ 0.38
CALCOCO2-211ENST00000508679 SNAP25P60880 206 aa17.42■□□□□ 0.38
CALCOCO2-211ENST00000508679 CMTR1Q8N1G2 835 aaKnown RBP17.42■□□□□ 0.38
CALCOCO2-211ENST00000508679 SMCR8Q8TEV9 937 aaPredicted RBP17.42■□□□□ 0.38
CALCOCO2-211ENST00000508679 RIPK3Q9Y572 518 aa17.42■□□□□ 0.38
CALCOCO2-211ENST00000508679 RBBP6Q7Z6E9 1792 aaKnown RBP17.42■□□□□ 0.38
CALCOCO2-211ENST00000508679 CNTNAP5Q8WYK1 1306 aa17.42■□□□□ 0.38
CALCOCO2-211ENST00000508679 GOLGA8BA8MQT2 603 aa17.41■□□□□ 0.38
CALCOCO2-211ENST00000508679 OAZ1P54368 228 aa17.41■□□□□ 0.38
CALCOCO2-211ENST00000508679 SCRN1Q12765 414 aa17.41■□□□□ 0.38
CALCOCO2-211ENST00000508679 PPP2R5BQ15173 497 aa17.41■□□□□ 0.38
CALCOCO2-211ENST00000508679 ANKRD1Q15327 319 aa17.41■□□□□ 0.38
CALCOCO2-211ENST00000508679 RTN1Q16799 776 aa17.41■□□□□ 0.38
CALCOCO2-211ENST00000508679 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.41■□□□□ 0.38
CALCOCO2-211ENST00000508679 CTCFLQ8NI51 663 aaPredicted RBP17.41■□□□□ 0.38
CALCOCO2-211ENST00000508679 ZNF296Q8WUU4 475 aaPredicted RBP17.41■□□□□ 0.38
CALCOCO2-211ENST00000508679 MOV10L1Q9BXT6 1211 aaKnown RBP17.41■□□□□ 0.38
CALCOCO2-211ENST00000508679 SPATC1LQ9H0A9 340 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms