RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 INTS4Q96HW7 963 aaKnown RBP5.73□□□□□ -1.49
SMARCA5-202ENST00000508573 KRTAP4-5Q9BYR2 181 aa5.73□□□□□ -1.49
SMARCA5-202ENST00000508573 ZNF552Q9H707 407 aaPredicted RBP5.73□□□□□ -1.49
SMARCA5-202ENST00000508573 PCDH12Q9NPG4 1184 aa5.73□□□□□ -1.49
SMARCA5-202ENST00000508573 GPR160Q9UJ42 338 aa5.73□□□□□ -1.49
SMARCA5-202ENST00000508573 YBX2Q9Y2T7 364 aaKnown RBP5.73□□□□□ -1.49
SMARCA5-202ENST00000508573 PSPNO60542 156 aa5.72□□□□□ -1.49
SMARCA5-202ENST00000508573 PEX10O60683 326 aa5.72□□□□□ -1.49
SMARCA5-202ENST00000508573 PRPF40AO75400 957 aaKnown RBP5.72□□□□□ -1.49
SMARCA5-202ENST00000508573 HSD3B2P26439 372 aa5.72□□□□□ -1.49
SMARCA5-202ENST00000508573 YARSP54577 528 aaKnown RBP5.72□□□□□ -1.49
SMARCA5-202ENST00000508573 NR0B2Q15466 257 aa5.72□□□□□ -1.49
SMARCA5-202ENST00000508573 CLEC16AQ2KHT3 1053 aa5.72□□□□□ -1.49
SMARCA5-202ENST00000508573 ZCRB1Q8TBF4 217 aaKnown RBP5.72□□□□□ -1.49
SMARCA5-202ENST00000508573 STAG1Q8WVM7 1258 aa5.72□□□□□ -1.49
SMARCA5-202ENST00000508573 DUSP9Q99956 384 aaKnown RBP5.72□□□□□ -1.49
SMARCA5-202ENST00000508573 TGIF2Q9GZN2 237 aa5.72□□□□□ -1.49
SMARCA5-202ENST00000508573 ACBD3Q9H3P7 528 aa5.72□□□□□ -1.49
SMARCA5-202ENST00000508573 IFT57Q9NWB7 429 aa5.72□□□□□ -1.49
SMARCA5-202ENST00000508573 EBF1Q9UH73 591 aa5.72□□□□□ -1.49
SMARCA5-202ENST00000508573 G3BP2Q9UN86 482 aaKnown RBP5.72□□□□□ -1.49
SMARCA5-202ENST00000508573 KCTD3Q9Y597 815 aa5.72□□□□□ -1.49
SMARCA5-202ENST00000508573 TEX51A0A1B0GUA7 166 aa5.71□□□□□ -1.5
SMARCA5-202ENST00000508573 RLBP1P12271 317 aa5.71□□□□□ -1.5
SMARCA5-202ENST00000508573 PAX3P23760 479 aa5.71□□□□□ -1.5
SMARCA5-202ENST00000508573 FOXD4Q12950 439 aaPredicted RBP5.71□□□□□ -1.5
SMARCA5-202ENST00000508573 SNX17Q15036 470 aa5.71□□□□□ -1.5
SMARCA5-202ENST00000508573 ZNF385BQ569K4 471 aa5.71□□□□□ -1.5
SMARCA5-202ENST00000508573 RNF187Q5TA31 235 aaPredicted RBP5.71□□□□□ -1.5
SMARCA5-202ENST00000508573 TMEM87AQ8NBN3 555 aa5.71□□□□□ -1.5
SMARCA5-202ENST00000508573 MAF1Q9H063 256 aa5.71□□□□□ -1.5
SMARCA5-202ENST00000508573 PNMA2Q9UL42 364 aa5.71□□□□□ -1.5
SMARCA5-202ENST00000508573 MRPL42Q9Y6G3 142 aaKnown RBP5.71□□□□□ -1.5
SMARCA5-202ENST00000508573 CHURC1-FNTBB4DL54 471 aa5.7□□□□□ -1.5
SMARCA5-202ENST00000508573 F6X3S4 739 aa5.7□□□□□ -1.5
SMARCA5-202ENST00000508573 SEMA7AO75326 666 aa5.7□□□□□ -1.5
SMARCA5-202ENST00000508573 BPNT1O95861 308 aa5.7□□□□□ -1.5
SMARCA5-202ENST00000508573 DNAJA1P31689 397 aaKnown RBP5.7□□□□□ -1.5
SMARCA5-202ENST00000508573 ZEB1P37275 1124 aaPredicted RBP5.7□□□□□ -1.5
SMARCA5-202ENST00000508573 FANCCQ00597 558 aa5.7□□□□□ -1.5
SMARCA5-202ENST00000508573 CHRNEQ04844 493 aa5.7□□□□□ -1.5
SMARCA5-202ENST00000508573 DUSP4Q13115 394 aa5.7□□□□□ -1.5
SMARCA5-202ENST00000508573 TAF1CQ15572 869 aaPredicted RBP5.7□□□□□ -1.5
SMARCA5-202ENST00000508573 TCERG1LQ5VWI1 586 aa5.7□□□□□ -1.5
SMARCA5-202ENST00000508573 BNC2Q6ZN30 1099 aaPredicted RBP5.7□□□□□ -1.5
SMARCA5-202ENST00000508573 CCDC146Q8IYE0 955 aa5.7□□□□□ -1.5
SMARCA5-202ENST00000508573 FAM9BQ8IZU0 186 aa5.7□□□□□ -1.5
SMARCA5-202ENST00000508573 RNF141Q8WVD5 230 aa5.7□□□□□ -1.5
SMARCA5-202ENST00000508573 KREMEN1Q96MU8 473 aa5.7□□□□□ -1.5
SMARCA5-202ENST00000508573 OSBPL2Q9H1P3 480 aa5.7□□□□□ -1.5
SMARCA5-202ENST00000508573 CCSER2Q9H7U1 834 aa5.7□□□□□ -1.5
SMARCA5-202ENST00000508573 GCM1Q9NP62 436 aa5.7□□□□□ -1.5
SMARCA5-202ENST00000508573 SHISA3A0PJX4 238 aa5.69□□□□□ -1.5
SMARCA5-202ENST00000508573 SH3BP5O60239 455 aa5.69□□□□□ -1.5
SMARCA5-202ENST00000508573 PTMSP20962 102 aa5.69□□□□□ -1.5
SMARCA5-202ENST00000508573 RPL10P27635 214 aaKnown RBP5.69□□□□□ -1.5
SMARCA5-202ENST00000508573 RHBDL3P58872 404 aa5.69□□□□□ -1.5
SMARCA5-202ENST00000508573 TEKQ02763 1124 aa5.69□□□□□ -1.5
SMARCA5-202ENST00000508573 LONRF3Q496Y0 759 aa5.69□□□□□ -1.5
SMARCA5-202ENST00000508573 TMEM201Q5SNT2 666 aa5.69□□□□□ -1.5
SMARCA5-202ENST00000508573 ZFYVE27Q5T4F4 411 aa5.69□□□□□ -1.5
SMARCA5-202ENST00000508573 TSHZ1Q6ZSZ6 1077 aa5.69□□□□□ -1.5
SMARCA5-202ENST00000508573 FILIP1Q7Z7B0 1213 aa5.69□□□□□ -1.5
SMARCA5-202ENST00000508573 CNPY4Q8N129 248 aa5.69□□□□□ -1.5
SMARCA5-202ENST00000508573 ANKS4BQ8N8V4 417 aa5.69□□□□□ -1.5
SMARCA5-202ENST00000508573 SHISA4Q96DD7 197 aa5.69□□□□□ -1.5
SMARCA5-202ENST00000508573 CCDC74BQ96LY2 380 aa5.69□□□□□ -1.5
SMARCA5-202ENST00000508573 DDX56Q9NY93 547 aaKnown RBP5.69□□□□□ -1.5
SMARCA5-202ENST00000508573 KLHL3Q9UH77 587 aa5.69□□□□□ -1.5
SMARCA5-202ENST00000508573 ZMYM5Q9UJ78 669 aa5.69□□□□□ -1.5
SMARCA5-202ENST00000508573 HMGB1P1B2RPK0 211 aaPredicted RBP5.68□□□□□ -1.5
SMARCA5-202ENST00000508573 FOXD2O60548 495 aaPredicted RBP5.68□□□□□ -1.5
SMARCA5-202ENST00000508573 CHMP4BP1P59074 171 aa5.68□□□□□ -1.5
SMARCA5-202ENST00000508573 SRSF3P84103 164 aaKnown RBP5.68□□□□□ -1.5
SMARCA5-202ENST00000508573 CAMK2GQ13555 558 aaPredicted RBP5.68□□□□□ -1.5
SMARCA5-202ENST00000508573 CLEC4GQ6UXB4 293 aa5.68□□□□□ -1.5
SMARCA5-202ENST00000508573 MARCH10Q8NA82 808 aaPredicted RBP5.68□□□□□ -1.5
SMARCA5-202ENST00000508573 PHC3Q8NDX5 983 aa5.68□□□□□ -1.5
SMARCA5-202ENST00000508573 LINC01599Q8WXQ3 324 aa5.68□□□□□ -1.5
SMARCA5-202ENST00000508573 RNF34Q969K3 372 aa5.68□□□□□ -1.5
SMARCA5-202ENST00000508573 FAM161BQ96MY7 647 aa5.68□□□□□ -1.5
SMARCA5-202ENST00000508573 ASCC2Q9H1I8 757 aaPredicted RBP5.68□□□□□ -1.5
SMARCA5-202ENST00000508573 RPS6KL1Q9Y6S9 549 aa5.68□□□□□ -1.5
SMARCA5-202ENST00000508573 OR14I1A6ND48 311 aa5.67□□□□□ -1.5
SMARCA5-202ENST00000508573 RFXAPO00287 272 aa5.67□□□□□ -1.5
SMARCA5-202ENST00000508573 GRIN3BO60391 1043 aa5.67□□□□□ -1.5
SMARCA5-202ENST00000508573 CILPO75339 1184 aa5.67□□□□□ -1.5
SMARCA5-202ENST00000508573 PF4P02776 101 aa5.67□□□□□ -1.5
SMARCA5-202ENST00000508573 GBP1P32455 592 aa5.67□□□□□ -1.5
SMARCA5-202ENST00000508573 TBX4P57082 545 aa5.67□□□□□ -1.5
SMARCA5-202ENST00000508573 SSPNQ14714 243 aa5.67□□□□□ -1.5
SMARCA5-202ENST00000508573 SLC14A2Q15849 920 aa5.67□□□□□ -1.5
SMARCA5-202ENST00000508573 C4orf46Q504U0 113 aa5.67□□□□□ -1.5
SMARCA5-202ENST00000508573 ADGRF1Q5T601 910 aa5.67□□□□□ -1.5
SMARCA5-202ENST00000508573 SOGA3Q5TF21 947 aa5.67□□□□□ -1.5
SMARCA5-202ENST00000508573 CCDC84Q86UT8 332 aaPredicted RBP5.67□□□□□ -1.5
SMARCA5-202ENST00000508573 FMNL3Q8IVF7 1028 aa5.67□□□□□ -1.5
SMARCA5-202ENST00000508573 SLFN12Q8IYM2 578 aa5.67□□□□□ -1.5
SMARCA5-202ENST00000508573 PHACTR4Q8IZ21 702 aa5.67□□□□□ -1.5
SMARCA5-202ENST00000508573 USHBP1Q8N6Y0 703 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms