RNA–Protein interactions for RNA: ENST00000508559.1

BRCC3P1-201, Transcript of BRCA1/BRCA2-containing complex subunit 3 pseudogene 1, humanhuman

BASIC

Gene BRCC3P1, Length 951 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P1-201ENST00000508559 SLC16A2P36021 539 aa12.78□□□□□ -0.36
BRCC3P1-201ENST00000508559 GJA5P36382 358 aa12.78□□□□□ -0.36
BRCC3P1-201ENST00000508559 DGKZQ13574 1117 aa12.78□□□□□ -0.36
BRCC3P1-201ENST00000508559 CUL4AQ13619 759 aa12.78□□□□□ -0.36
BRCC3P1-201ENST00000508559 KIAA1755Q5JYT7 1200 aa12.78□□□□□ -0.36
BRCC3P1-201ENST00000508559 SYDE2Q5VT97 1194 aa12.78□□□□□ -0.36
BRCC3P1-201ENST00000508559 TTBK2Q6IQ55 1244 aa12.78□□□□□ -0.36
BRCC3P1-201ENST00000508559 HOMER1Q86YM7 354 aa12.78□□□□□ -0.36
BRCC3P1-201ENST00000508559 RASAL3Q86YV0 1011 aa12.78□□□□□ -0.36
BRCC3P1-201ENST00000508559 WASF1Q92558 559 aa12.78□□□□□ -0.36
BRCC3P1-201ENST00000508559 PHKBQ93100 1093 aa12.78□□□□□ -0.36
BRCC3P1-201ENST00000508559 INTS4Q96HW7 963 aaKnown RBP12.78□□□□□ -0.36
BRCC3P1-201ENST00000508559 C12orf42Q96LP6 360 aa12.78□□□□□ -0.36
BRCC3P1-201ENST00000508559 SLF1Q9BQI6 1058 aa12.78□□□□□ -0.36
BRCC3P1-201ENST00000508559 RBM27Q9P2N5 1060 aaKnown RBP12.78□□□□□ -0.36
BRCC3P1-201ENST00000508559 ORC3Q9UBD5 711 aaPredicted RBP12.78□□□□□ -0.36
BRCC3P1-201ENST00000508559 V9GY48 417 aaPredicted RBP12.78□□□□□ -0.36
BRCC3P1-201ENST00000508559 NID2Q14112 1375 aa12.78□□□□□ -0.36
BRCC3P1-201ENST00000508559 MANSC4A6NHS7 340 aaPredicted RBP12.77□□□□□ -0.37
BRCC3P1-201ENST00000508559 ZBED4O75132 1171 aa12.77□□□□□ -0.37
BRCC3P1-201ENST00000508559 CACNB1Q02641 598 aaPredicted RBP12.77□□□□□ -0.37
BRCC3P1-201ENST00000508559 TRIM29Q14134 588 aa12.77□□□□□ -0.37
BRCC3P1-201ENST00000508559 DEFB115Q30KQ5 88 aa12.77□□□□□ -0.37
BRCC3P1-201ENST00000508559 ADGRF4Q8IZF3 695 aa12.77□□□□□ -0.37
BRCC3P1-201ENST00000508559 SRBD1Q8N5C6 995 aaKnown RBP12.77□□□□□ -0.37
BRCC3P1-201ENST00000508559 HHIPL1Q96JK4 782 aa12.77□□□□□ -0.37
BRCC3P1-201ENST00000508559 SPZ1Q9BXG8 430 aa12.77□□□□□ -0.37
BRCC3P1-201ENST00000508559 CPVLQ9H3G5 476 aa12.77□□□□□ -0.37
BRCC3P1-201ENST00000508559 FAM217BQ9NTX9 383 aaPredicted RBP12.77□□□□□ -0.37
BRCC3P1-201ENST00000508559 AGTPBP1Q9UPW5 1226 aa12.77□□□□□ -0.37
BRCC3P1-201ENST00000508559 JAK2O60674 1132 aa12.76□□□□□ -0.37
BRCC3P1-201ENST00000508559 FMNL1O95466 1100 aaPredicted RBP12.76□□□□□ -0.37
BRCC3P1-201ENST00000508559 SLC10A3P09131 477 aa12.76□□□□□ -0.37
BRCC3P1-201ENST00000508559 XBP1P17861 261 aa12.76□□□□□ -0.37
BRCC3P1-201ENST00000508559 SMARCA1P28370 1054 aa12.76□□□□□ -0.37
BRCC3P1-201ENST00000508559 GJB2P29033 226 aa12.76□□□□□ -0.37
BRCC3P1-201ENST00000508559 FOSBP53539 338 aa12.76□□□□□ -0.37
BRCC3P1-201ENST00000508559 SREBF2Q12772 1141 aa12.76□□□□□ -0.37
BRCC3P1-201ENST00000508559 COG2Q14746 738 aa12.76□□□□□ -0.37
BRCC3P1-201ENST00000508559 TREML2Q5T2D2 321 aa12.76□□□□□ -0.37
BRCC3P1-201ENST00000508559 OTUD7BQ6GQQ9 843 aa12.76□□□□□ -0.37
BRCC3P1-201ENST00000508559 PRPF38AQ8NAV1 312 aaKnown RBP12.76□□□□□ -0.37
BRCC3P1-201ENST00000508559 NSUN7Q8NE18 718 aaKnown RBP12.76□□□□□ -0.37
BRCC3P1-201ENST00000508559 RNF26Q9BY78 433 aaPredicted RBP12.76□□□□□ -0.37
BRCC3P1-201ENST00000508559 FBXO28Q9NVF7 368 aa12.76□□□□□ -0.37
BRCC3P1-201ENST00000508559 HOXC10Q9NYD6 342 aa12.76□□□□□ -0.37
BRCC3P1-201ENST00000508559 PNMA3Q9UL41 463 aa12.76□□□□□ -0.37
BRCC3P1-201ENST00000508559 hCG_1642624A0A1W2PR95 340 aa12.75□□□□□ -0.37
BRCC3P1-201ENST00000508559 H3BQV1 296 aa12.75□□□□□ -0.37
BRCC3P1-201ENST00000508559 PRPF3O43395 683 aaKnown RBP12.75□□□□□ -0.37
BRCC3P1-201ENST00000508559 PLA2G6O60733 806 aa12.75□□□□□ -0.37
BRCC3P1-201ENST00000508559 DTNBO60941 627 aa12.75□□□□□ -0.37
BRCC3P1-201ENST00000508559 DEXIO95424 95 aa12.75□□□□□ -0.37
BRCC3P1-201ENST00000508559 PDCP20941 246 aa12.75□□□□□ -0.37
BRCC3P1-201ENST00000508559 INHBEP58166 350 aa12.75□□□□□ -0.37
BRCC3P1-201ENST00000508559 TRAF1Q13077 416 aa12.75□□□□□ -0.37
BRCC3P1-201ENST00000508559 IFFO2Q5TF58 517 aa12.75□□□□□ -0.37
BRCC3P1-201ENST00000508559 CYP4F22Q6NT55 531 aa12.75□□□□□ -0.37
BRCC3P1-201ENST00000508559 CCDC174Q6PII3 467 aa12.75□□□□□ -0.37
BRCC3P1-201ENST00000508559 BTNL9Q6UXG8 535 aa12.75□□□□□ -0.37
BRCC3P1-201ENST00000508559 CATSPERGQ6ZRH7 1159 aa12.75□□□□□ -0.37
BRCC3P1-201ENST00000508559 HEATR3Q7Z4Q2 680 aa12.75□□□□□ -0.37
BRCC3P1-201ENST00000508559 CNTNAP5Q8WYK1 1306 aa12.75□□□□□ -0.37
BRCC3P1-201ENST00000508559 PIGSQ96S52 555 aa12.75□□□□□ -0.37
BRCC3P1-201ENST00000508559 JMJD4Q9H9V9 463 aa12.75□□□□□ -0.37
BRCC3P1-201ENST00000508559 CWC22Q9HCG8 908 aaKnown RBP12.75□□□□□ -0.37
BRCC3P1-201ENST00000508559 PPP1R9AQ9ULJ8 1098 aa12.75□□□□□ -0.37
BRCC3P1-201ENST00000508559 PRR12Q9ULL5 1215 aa12.75□□□□□ -0.37
BRCC3P1-201ENST00000508559 STK36Q9NRP7 1315 aa12.74□□□□□ -0.37
BRCC3P1-201ENST00000508559 PNMA6FA0A0J9YX94 578 aa12.74□□□□□ -0.37
BRCC3P1-201ENST00000508559 CTDNEP1O95476 244 aa12.74□□□□□ -0.37
BRCC3P1-201ENST00000508559 FDX1P10109 184 aa12.74□□□□□ -0.37
BRCC3P1-201ENST00000508559 SNAP25P60880 206 aa12.74□□□□□ -0.37
BRCC3P1-201ENST00000508559 ST3GAL1Q11201 340 aa12.74□□□□□ -0.37
BRCC3P1-201ENST00000508559 NOGQ13253 232 aa12.74□□□□□ -0.37
BRCC3P1-201ENST00000508559 NTRK3Q16288 839 aa12.74□□□□□ -0.37
BRCC3P1-201ENST00000508559 CDC37Q16543 378 aaPredicted RBP12.74□□□□□ -0.37
BRCC3P1-201ENST00000508559 NBPF11Q86T75 865 aa12.74□□□□□ -0.37
BRCC3P1-201ENST00000508559 SMCR8Q8TEV9 937 aaPredicted RBP12.74□□□□□ -0.37
BRCC3P1-201ENST00000508559 BRI3BPQ8WY22 251 aa12.74□□□□□ -0.37
BRCC3P1-201ENST00000508559 CAPNS2Q96L46 248 aa12.74□□□□□ -0.37
BRCC3P1-201ENST00000508559 ALG1Q9BT22 464 aa12.74□□□□□ -0.37
BRCC3P1-201ENST00000508559 RIOX1Q9H6W3 641 aa12.74□□□□□ -0.37
BRCC3P1-201ENST00000508559 RASSF10A6NK89 507 aa12.73□□□□□ -0.37
BRCC3P1-201ENST00000508559 BTBD19C9JJ37 291 aa12.73□□□□□ -0.37
BRCC3P1-201ENST00000508559 PDHXO00330 501 aa12.73□□□□□ -0.37
BRCC3P1-201ENST00000508559 ZBTB5O15062 677 aa12.73□□□□□ -0.37
BRCC3P1-201ENST00000508559 SCG2P13521 617 aa12.73□□□□□ -0.37
BRCC3P1-201ENST00000508559 HOXA7P31268 230 aaPredicted RBP12.73□□□□□ -0.37
BRCC3P1-201ENST00000508559 DSG3P32926 999 aa12.73□□□□□ -0.37
BRCC3P1-201ENST00000508559 FUT2Q10981 343 aa12.73□□□□□ -0.37
BRCC3P1-201ENST00000508559 GNL2Q13823 731 aaKnown RBP12.73□□□□□ -0.37
BRCC3P1-201ENST00000508559 PLS1Q14651 629 aa12.73□□□□□ -0.37
BRCC3P1-201ENST00000508559 LARP1BQ659C4 914 aaKnown RBP12.73□□□□□ -0.37
BRCC3P1-201ENST00000508559 ANKRD23Q86SG2 305 aa12.73□□□□□ -0.37
BRCC3P1-201ENST00000508559 FBXO11Q86XK2 927 aa12.73□□□□□ -0.37
BRCC3P1-201ENST00000508559 SMARCC2Q8TAQ2 1214 aa12.73□□□□□ -0.37
BRCC3P1-201ENST00000508559 CCDC12Q8WUD4 166 aaPredicted RBP12.73□□□□□ -0.37
BRCC3P1-201ENST00000508559 ATG4CQ96DT6 458 aa12.73□□□□□ -0.37
BRCC3P1-201ENST00000508559 MS4A4AQ96JQ5 239 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms