RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 RASGRP2Q7LDG7 609 aa16.96■□□□□ 0.31
RAB28-205ENST00000508274 C7orf61Q8IZ16 206 aa16.96■□□□□ 0.31
RAB28-205ENST00000508274 KIFC2Q96AC6 838 aa16.96■□□□□ 0.31
RAB28-205ENST00000508274 MAML3Q96JK9 1138 aa16.96■□□□□ 0.31
RAB28-205ENST00000508274 MMP19Q99542 508 aa16.96■□□□□ 0.31
RAB28-205ENST00000508274 PCDH10Q9P2E7 1040 aa16.96■□□□□ 0.31
RAB28-205ENST00000508274 RBM27Q9P2N5 1060 aaKnown RBP16.96■□□□□ 0.31
RAB28-205ENST00000508274 DDX20Q9UHI6 824 aaKnown RBP16.96■□□□□ 0.31
RAB28-205ENST00000508274 TSPY2A6NKD2 308 aa16.95■□□□□ 0.3
RAB28-205ENST00000508274 COL6A1P12109 1028 aa16.95■□□□□ 0.3
RAB28-205ENST00000508274 PRAMEF19Q5SWL8 479 aa16.95■□□□□ 0.3
RAB28-205ENST00000508274 PRPF38AQ8NAV1 312 aaKnown RBP16.95■□□□□ 0.3
RAB28-205ENST00000508274 GMCL1P1Q8NEA9 526 aa16.95■□□□□ 0.3
RAB28-205ENST00000508274 RIPK3Q9Y572 518 aa16.95■□□□□ 0.3
RAB28-205ENST00000508274 SMCHD1A6NHR9 2005 aa16.95■□□□□ 0.3
RAB28-205ENST00000508274 FXR1P51114 621 aaKnown RBP eCLIP16.94■□□□□ 0.3
RAB28-205ENST00000508274 ANO1Q5XXA6 986 aa16.94■□□□□ 0.3
RAB28-205ENST00000508274 SLFN13Q68D06 897 aa16.94■□□□□ 0.3
RAB28-205ENST00000508274 SNRNP48Q6IEG0 339 aaKnown RBP16.94■□□□□ 0.3
RAB28-205ENST00000508274 CPXCR1Q8N123 301 aa16.94■□□□□ 0.3
RAB28-205ENST00000508274 IL17RBQ9NRM6 502 aa16.94■□□□□ 0.3
RAB28-205ENST00000508274 ANAPC4Q9UJX5 808 aa16.94■□□□□ 0.3
RAB28-205ENST00000508274 SYNPO2Q9UMS6 1093 aa16.94■□□□□ 0.3
RAB28-205ENST00000508274 RANBP6O60518 1105 aaKnown RBP16.94■□□□□ 0.3
RAB28-205ENST00000508274 FGAP02671 866 aa16.94■□□□□ 0.3
RAB28-205ENST00000508274 HSPD1P10809 573 aaKnown RBP16.94■□□□□ 0.3
RAB28-205ENST00000508274 SLC4A3P48751 1232 aa16.94■□□□□ 0.3
RAB28-205ENST00000508274 IRX6P78412 446 aaPredicted RBP16.94■□□□□ 0.3
RAB28-205ENST00000508274 KCTD2Q14681 263 aa16.94■□□□□ 0.3
RAB28-205ENST00000508274 ALX1Q15699 326 aa16.94■□□□□ 0.3
RAB28-205ENST00000508274 TEX13BQ9BXU2 312 aa16.94■□□□□ 0.3
RAB28-205ENST00000508274 PRO3102Q9H379 93 aa16.94■□□□□ 0.3
RAB28-205ENST00000508274 OSBPL3Q9H4L5 887 aa16.94■□□□□ 0.3
RAB28-205ENST00000508274 RAVER2Q9HCJ3 691 aaKnown RBP16.94■□□□□ 0.3
RAB28-205ENST00000508274 SLC5A4Q9NY91 659 aa16.94■□□□□ 0.3
RAB28-205ENST00000508274 ISY1Q9ULR0 285 aaKnown RBP16.94■□□□□ 0.3
RAB28-205ENST00000508274 ZMYND8Q9ULU4 1186 aaPredicted RBP16.94■□□□□ 0.3
RAB28-205ENST00000508274 STX8Q9UNK0 236 aa16.94■□□□□ 0.3
RAB28-205ENST00000508274 CCDC171Q6TFL3 1326 aa16.93■□□□□ 0.3
RAB28-205ENST00000508274 BMP3P12645 472 aa16.93■□□□□ 0.3
RAB28-205ENST00000508274 SDSP20132 328 aa16.93■□□□□ 0.3
RAB28-205ENST00000508274 HAND2P61296 217 aa16.93■□□□□ 0.3
RAB28-205ENST00000508274 SLC38A10Q9HBR0 1119 aa16.93■□□□□ 0.3
RAB28-205ENST00000508274 FOXD4L1Q9NU39 408 aa16.93■□□□□ 0.3
RAB28-205ENST00000508274 FEM1BQ9UK73 627 aa16.93■□□□□ 0.3
RAB28-205ENST00000508274 MCM3APO60318 1980 aa16.92■□□□□ 0.3
RAB28-205ENST00000508274 LAMA4Q16363 1823 aa16.92■□□□□ 0.3
RAB28-205ENST00000508274 ORC4O43929 436 aa16.92■□□□□ 0.3
RAB28-205ENST00000508274 MSCO60682 206 aa16.92■□□□□ 0.3
RAB28-205ENST00000508274 SYN1P17600 705 aa16.92■□□□□ 0.3
RAB28-205ENST00000508274 COPB2P35606 906 aa16.92■□□□□ 0.3
RAB28-205ENST00000508274 LRRC26Q2I0M4 334 aa16.92■□□□□ 0.3
RAB28-205ENST00000508274 ZNF792Q3KQV3 632 aa16.92■□□□□ 0.3
RAB28-205ENST00000508274 TOMM22Q9NS69 142 aa16.92■□□□□ 0.3
RAB28-205ENST00000508274 TMEM232C9JQI7 657 aa16.91■□□□□ 0.3
RAB28-205ENST00000508274 SEPT4O43236 478 aa16.91■□□□□ 0.3
RAB28-205ENST00000508274 FGRP09769 529 aa16.91■□□□□ 0.3
RAB28-205ENST00000508274 MCCP23508 829 aa16.91■□□□□ 0.3
RAB28-205ENST00000508274 RRP12Q5JTH9 1297 aaKnown RBP16.91■□□□□ 0.3
RAB28-205ENST00000508274 TICAM2Q86XR7 235 aa16.91■□□□□ 0.3
RAB28-205ENST00000508274 MTMR7Q9Y216 660 aa16.91■□□□□ 0.3
RAB28-205ENST00000508274 ZMYM6O95789 1325 aa16.9■□□□□ 0.3
RAB28-205ENST00000508274 ATP2A1O14983 1001 aa16.9■□□□□ 0.3
RAB28-205ENST00000508274 ZBED4O75132 1171 aa16.9■□□□□ 0.3
RAB28-205ENST00000508274 TAL1P17542 331 aaPredicted RBP16.9■□□□□ 0.3
RAB28-205ENST00000508274 SLC1A4P43007 532 aa16.9■□□□□ 0.3
RAB28-205ENST00000508274 STAT2P52630 851 aa16.9■□□□□ 0.3
RAB28-205ENST00000508274 GJC2Q5T442 439 aaPredicted RBP16.9■□□□□ 0.3
RAB28-205ENST00000508274 KCTD1Q719H9 257 aa16.9■□□□□ 0.3
RAB28-205ENST00000508274 TBC1D10CQ8IV04 446 aa16.9■□□□□ 0.3
RAB28-205ENST00000508274 GMCL1Q96IK5 515 aa16.9■□□□□ 0.3
RAB28-205ENST00000508274 SENP6Q9GZR1 1112 aaPredicted RBP16.9■□□□□ 0.3
RAB28-205ENST00000508274 CTDP1Q9Y5B0 961 aaPredicted RBP16.9■□□□□ 0.3
RAB28-205ENST00000508274 NOVP48745 357 aa16.89■□□□□ 0.3
RAB28-205ENST00000508274 CWC27Q6UX04 472 aaKnown RBP16.89■□□□□ 0.3
RAB28-205ENST00000508274 TINF2Q9BSI4 451 aa16.89■□□□□ 0.3
RAB28-205ENST00000508274 DIS3Q9Y2L1 958 aaKnown RBP16.89■□□□□ 0.3
RAB28-205ENST00000508274 DNAJC25-GNG10A0A024R161 153 aa16.89■□□□□ 0.29
RAB28-205ENST00000508274 DNM1LO00429 736 aa16.89■□□□□ 0.29
RAB28-205ENST00000508274 PDE4AP27815 886 aa16.89■□□□□ 0.29
RAB28-205ENST00000508274 SNAP25P60880 206 aa16.89■□□□□ 0.29
RAB28-205ENST00000508274 IKQ13123 557 aaPredicted RBP16.89■□□□□ 0.29
RAB28-205ENST00000508274 HOMER2Q9NSB8 354 aa16.89■□□□□ 0.29
RAB28-205ENST00000508274 MYCNP04198 464 aaPredicted RBP16.88■□□□□ 0.29
RAB28-205ENST00000508274 ATN1P54259 1190 aaPredicted RBP16.88■□□□□ 0.29
RAB28-205ENST00000508274 PPP4R3BQ5MIZ7 849 aa16.88■□□□□ 0.29
RAB28-205ENST00000508274 STAG1Q8WVM7 1258 aa16.88■□□□□ 0.29
RAB28-205ENST00000508274 LENG1Q96BZ8 264 aaPredicted RBP16.88■□□□□ 0.29
RAB28-205ENST00000508274 DDX11Q96FC9 970 aa16.88■□□□□ 0.29
RAB28-205ENST00000508274 DIAPH3Q9NSV4 1193 aa16.88■□□□□ 0.29
RAB28-205ENST00000508274 LAMA2P24043 3122 aaKnown RBP16.87■□□□□ 0.29
RAB28-205ENST00000508274 ZNF536O15090 1300 aa16.87■□□□□ 0.29
RAB28-205ENST00000508274 OAZ1P54368 228 aa16.87■□□□□ 0.29
RAB28-205ENST00000508274 FAM160B2Q86V87 743 aa16.87■□□□□ 0.29
RAB28-205ENST00000508274 CHURC1Q8WUH1 139 aa16.87■□□□□ 0.29
RAB28-205ENST00000508274 FGD4Q96M96 766 aa16.87■□□□□ 0.29
RAB28-205ENST00000508274 AGBL1Q96MI9 1066 aa16.87■□□□□ 0.29
RAB28-205ENST00000508274 GDF15Q99988 308 aa16.87■□□□□ 0.29
RAB28-205ENST00000508274 NEDD4P46934 1319 aa16.86■□□□□ 0.29
RAB28-205ENST00000508274 ZNF865P0CJ78 1059 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms