RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-222ENST00000508238 Q3C1V9 767 aa9.55□□□□□ -0.88
UBE2D3-222ENST00000508238 SBK1Q52WX2 424 aa9.55□□□□□ -0.88
UBE2D3-222ENST00000508238 C16orf86Q6ZW13 317 aa9.55□□□□□ -0.88
UBE2D3-222ENST00000508238 UBE2Q1Q7Z7E8 422 aa9.55□□□□□ -0.88
UBE2D3-222ENST00000508238 SIAH1Q8IUQ4 282 aa9.55□□□□□ -0.88
UBE2D3-222ENST00000508238 APPBP2Q92624 585 aa9.55□□□□□ -0.88
UBE2D3-222ENST00000508238 FEZ1Q99689 392 aa9.55□□□□□ -0.88
UBE2D3-222ENST00000508238 RNF208Q9H0X6 261 aa9.55□□□□□ -0.88
UBE2D3-222ENST00000508238 BIN2Q9UBW5 565 aaPredicted RBP9.55□□□□□ -0.88
UBE2D3-222ENST00000508238 RABGAP1Q9Y3P9 1069 aa9.55□□□□□ -0.88
UBE2D3-222ENST00000508238 SLC4A4Q9Y6R1 1079 aa9.55□□□□□ -0.88
UBE2D3-222ENST00000508238 A0A1W2PRG0 241 aa9.54□□□□□ -0.88
UBE2D3-222ENST00000508238 GSG1L2A8MUP6 293 aa9.54□□□□□ -0.88
UBE2D3-222ENST00000508238 GLRX3O76003 335 aaKnown RBP9.54□□□□□ -0.88
UBE2D3-222ENST00000508238 MYCP01106 439 aaPredicted RBP9.54□□□□□ -0.88
UBE2D3-222ENST00000508238 INHAP05111 366 aa9.54□□□□□ -0.88
UBE2D3-222ENST00000508238 ELNP15502 786 aa9.54□□□□□ -0.88
UBE2D3-222ENST00000508238 CDK8P49336 464 aa9.54□□□□□ -0.88
UBE2D3-222ENST00000508238 ERVK-9P63128 1117 aa9.54□□□□□ -0.88
UBE2D3-222ENST00000508238 ERVK-24P63145 666 aa9.54□□□□□ -0.88
UBE2D3-222ENST00000508238 CTR9Q6PD62 1173 aa9.54□□□□□ -0.88
UBE2D3-222ENST00000508238 AMOTL1Q8IY63 956 aa9.54□□□□□ -0.88
UBE2D3-222ENST00000508238 SLC44A5Q8NCS7 719 aa9.54□□□□□ -0.88
UBE2D3-222ENST00000508238 PI4K2BQ8TCG2 481 aa9.54□□□□□ -0.88
UBE2D3-222ENST00000508238 USP6NLQ92738 828 aa9.54□□□□□ -0.88
UBE2D3-222ENST00000508238 OSBP2Q969R2 916 aa9.54□□□□□ -0.88
UBE2D3-222ENST00000508238 SHISA4Q96DD7 197 aa9.54□□□□□ -0.88
UBE2D3-222ENST00000508238 DYNLL2Q96FJ2 89 aa9.54□□□□□ -0.88
UBE2D3-222ENST00000508238 UNC93B1Q9H1C4 597 aa9.54□□□□□ -0.88
UBE2D3-222ENST00000508238 PAK6Q9NQU5 681 aaPredicted RBP9.54□□□□□ -0.88
UBE2D3-222ENST00000508238 HOXC10Q9NYD6 342 aa9.54□□□□□ -0.88
UBE2D3-222ENST00000508238 RLFQ13129 1914 aa9.53□□□□□ -0.88
UBE2D3-222ENST00000508238 MOXD2PA6NHM9 499 aa9.53□□□□□ -0.88
UBE2D3-222ENST00000508238 MPHOSPH10O00566 681 aaKnown RBP9.53□□□□□ -0.88
UBE2D3-222ENST00000508238 SGPL1O95470 568 aa9.53□□□□□ -0.88
UBE2D3-222ENST00000508238 HMGCRP04035 888 aa9.53□□□□□ -0.88
UBE2D3-222ENST00000508238 AKR1B1P15121 316 aa9.53□□□□□ -0.88
UBE2D3-222ENST00000508238 GNAT2P19087 354 aa9.53□□□□□ -0.88
UBE2D3-222ENST00000508238 CCNA1P78396 465 aa9.53□□□□□ -0.88
UBE2D3-222ENST00000508238 COG2Q14746 738 aa9.53□□□□□ -0.88
UBE2D3-222ENST00000508238 TICAM2Q86XR7 235 aa9.53□□□□□ -0.88
UBE2D3-222ENST00000508238 TRMT44Q8IYL2 757 aaKnown RBP9.53□□□□□ -0.88
UBE2D3-222ENST00000508238 U2AF1L4Q8WU68 220 aaKnown RBP9.53□□□□□ -0.88
UBE2D3-222ENST00000508238 SOCS4Q8WXH5 440 aa9.53□□□□□ -0.88
UBE2D3-222ENST00000508238 LPAR1Q92633 364 aa9.53□□□□□ -0.88
UBE2D3-222ENST00000508238 GCC1Q96CN9 775 aa9.53□□□□□ -0.88
UBE2D3-222ENST00000508238 KCTD12Q96CX2 325 aaKnown RBP9.53□□□□□ -0.88
UBE2D3-222ENST00000508238 CRBNQ96SW2 442 aa9.53□□□□□ -0.88
UBE2D3-222ENST00000508238 NUDT12Q9BQG2 462 aa9.53□□□□□ -0.88
UBE2D3-222ENST00000508238 KANSL2Q9H9L4 492 aa9.53□□□□□ -0.88
UBE2D3-222ENST00000508238 ARPP21Q9UBL0 812 aaPredicted RBP9.53□□□□□ -0.88
UBE2D3-222ENST00000508238 STAP2Q9UGK3 403 aa9.53□□□□□ -0.88
UBE2D3-222ENST00000508238 TMX2Q9Y320 296 aa9.53□□□□□ -0.88
UBE2D3-222ENST00000508238 PLXNB2O15031 1838 aa9.53□□□□□ -0.88
UBE2D3-222ENST00000508238 SALL3Q9BXA9 1300 aa9.53□□□□□ -0.88
UBE2D3-222ENST00000508238 CYP2D7A0A087X1C5 515 aa9.52□□□□□ -0.89
UBE2D3-222ENST00000508238 SMIM22K7EJ46 135 aa9.52□□□□□ -0.89
UBE2D3-222ENST00000508238 PEX10O60683 326 aa9.52□□□□□ -0.89
UBE2D3-222ENST00000508238 CNMDO75829 334 aa9.52□□□□□ -0.89
UBE2D3-222ENST00000508238 NDUFV2P19404 249 aa9.52□□□□□ -0.89
UBE2D3-222ENST00000508238 MX1P20591 662 aa9.52□□□□□ -0.89
UBE2D3-222ENST00000508238 ZYXQ15942 572 aaKnown RBP9.52□□□□□ -0.89
UBE2D3-222ENST00000508238 MORN1Q5T089 497 aa9.52□□□□□ -0.89
UBE2D3-222ENST00000508238 MAP3K21Q5TCX8 1036 aa9.52□□□□□ -0.89
UBE2D3-222ENST00000508238 TSHZ3Q63HK5 1081 aa9.52□□□□□ -0.89
UBE2D3-222ENST00000508238 GPR142Q7Z601 462 aa9.52□□□□□ -0.89
UBE2D3-222ENST00000508238 PLEKHH3Q7Z736 793 aa9.52□□□□□ -0.89
UBE2D3-222ENST00000508238 OTUD7AQ8TE49 926 aaPredicted RBP9.52□□□□□ -0.89
UBE2D3-222ENST00000508238 PORCNQ9H237 461 aa9.52□□□□□ -0.89
UBE2D3-222ENST00000508238 RPAP3Q9H6T3 665 aaPredicted RBP9.52□□□□□ -0.89
UBE2D3-222ENST00000508238 SH2D4AQ9H788 454 aa9.52□□□□□ -0.89
UBE2D3-222ENST00000508238 ARHGEF10LQ9HCE6 1279 aa9.52□□□□□ -0.89
UBE2D3-222ENST00000508238 TSR3Q9UJK0 312 aaKnown RBP9.52□□□□□ -0.89
UBE2D3-222ENST00000508238 RPTORQ8N122 1335 aa9.52□□□□□ -0.89
UBE2D3-222ENST00000508238 RANBP2P49792 3224 aaKnown RBP9.52□□□□□ -0.89
UBE2D3-222ENST00000508238 PATL2C9JE40 543 aaKnown RBP9.51□□□□□ -0.89
UBE2D3-222ENST00000508238 GPAA1O43292 621 aa9.51□□□□□ -0.89
UBE2D3-222ENST00000508238 CLK2P49760 499 aaKnown RBP9.51□□□□□ -0.89
UBE2D3-222ENST00000508238 USP46P62068 366 aa9.51□□□□□ -0.89
UBE2D3-222ENST00000508238 ICA1Q05084 483 aa9.51□□□□□ -0.89
UBE2D3-222ENST00000508238 KMT5BQ4FZB7 885 aa9.51□□□□□ -0.89
UBE2D3-222ENST00000508238 KIAA1755Q5JYT7 1200 aa9.51□□□□□ -0.89
UBE2D3-222ENST00000508238 ZMYM1Q5SVZ6 1142 aa9.51□□□□□ -0.89
UBE2D3-222ENST00000508238 ANKRD45Q5TZF3 282 aa9.51□□□□□ -0.89
UBE2D3-222ENST00000508238 CCAR1Q8IX12 1150 aaKnown RBP9.51□□□□□ -0.89
UBE2D3-222ENST00000508238 MB21D1Q8N884 522 aa9.51□□□□□ -0.89
UBE2D3-222ENST00000508238 TRIB2Q92519 343 aa9.51□□□□□ -0.89
UBE2D3-222ENST00000508238 DEFB118Q96PH6 123 aa9.51□□□□□ -0.89
UBE2D3-222ENST00000508238 PAGR1Q9BTK6 254 aa9.51□□□□□ -0.89
UBE2D3-222ENST00000508238 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.51□□□□□ -0.89
UBE2D3-222ENST00000508238 VCPKMTQ9H867 229 aa9.51□□□□□ -0.89
UBE2D3-222ENST00000508238 LIMD1Q9UGP4 676 aa9.51□□□□□ -0.89
UBE2D3-222ENST00000508238 ADAMTS5Q9UNA0 930 aa9.51□□□□□ -0.89
UBE2D3-222ENST00000508238 ROBO3Q96MS0 1386 aa9.5□□□□□ -0.89
UBE2D3-222ENST00000508238 SLC15A5A6NIM6 579 aa9.5□□□□□ -0.89
UBE2D3-222ENST00000508238 SPTLC1O15269 473 aa9.5□□□□□ -0.89
UBE2D3-222ENST00000508238 STRNO43815 780 aa9.5□□□□□ -0.89
UBE2D3-222ENST00000508238 IGHA2P01877 340 aa9.5□□□□□ -0.89
UBE2D3-222ENST00000508238 HOXC6P09630 235 aa9.5□□□□□ -0.89
UBE2D3-222ENST00000508238 EEF2P13639 858 aaKnown RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms