RNA–Protein interactions for RNA: ENST00000508117.6

CAST-220, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-220ENST00000508117 ZNF792Q3KQV3 632 aa11.12□□□□□ -0.63
CAST-220ENST00000508117 TNNI3KQ59H18 835 aa11.12□□□□□ -0.63
CAST-220ENST00000508117 CCSAPQ6IQ19 270 aaPredicted RBP11.12□□□□□ -0.63
CAST-220ENST00000508117 PSRC1Q6PGN9 363 aaPredicted RBP11.12□□□□□ -0.63
CAST-220ENST00000508117 NCAPG2Q86XI2 1143 aa11.12□□□□□ -0.63
CAST-220ENST00000508117 TRMT2AQ8IZ69 625 aaKnown RBP11.12□□□□□ -0.63
CAST-220ENST00000508117 KLHDC9Q8NEP7 349 aa11.12□□□□□ -0.63
CAST-220ENST00000508117 PPM1EQ8WY54 764 aa11.12□□□□□ -0.63
CAST-220ENST00000508117 DBNDD2Q9BQY9 259 aa11.12□□□□□ -0.63
CAST-220ENST00000508117 PIH1D3Q9NQM4 214 aaKnown RBP11.12□□□□□ -0.63
CAST-220ENST00000508117 FPGT-TNNI3KV9GXZ4 949 aa11.12□□□□□ -0.63
CAST-220ENST00000508117 COL11A1P12107 1806 aaPredicted RBP11.12□□□□□ -0.63
CAST-220ENST00000508117 CHD7Q9P2D1 2997 aa11.11□□□□□ -0.63
CAST-220ENST00000508117 TCF20Q9UGU0 1960 aaKnown RBP11.11□□□□□ -0.63
CAST-220ENST00000508117 HOXB3P14651 431 aaPredicted RBP11.11□□□□□ -0.63
CAST-220ENST00000508117 CST5P28325 142 aaPredicted RBP11.11□□□□□ -0.63
CAST-220ENST00000508117 COPB2P35606 906 aa11.11□□□□□ -0.63
CAST-220ENST00000508117 ZAP70P43403 619 aa11.11□□□□□ -0.63
CAST-220ENST00000508117 CDK7P50613 346 aa11.11□□□□□ -0.63
CAST-220ENST00000508117 PLCD1P51178 756 aa11.11□□□□□ -0.63
CAST-220ENST00000508117 PLS1Q14651 629 aa11.11□□□□□ -0.63
CAST-220ENST00000508117 AAK1Q2M2I8 961 aa11.11□□□□□ -0.63
CAST-220ENST00000508117 CCDC129Q6ZRS4 1044 aa11.11□□□□□ -0.63
CAST-220ENST00000508117 RIOX2Q8IUF8 465 aa11.11□□□□□ -0.63
CAST-220ENST00000508117 TMEM199Q8N511 208 aa11.11□□□□□ -0.63
CAST-220ENST00000508117 MSRAQ9UJ68 235 aa11.11□□□□□ -0.63
CAST-220ENST00000508117 PNMA6EA0A0J9YXQ4 647 aa11.1□□□□□ -0.63
CAST-220ENST00000508117 FAM205CA6NFA0 338 aa11.1□□□□□ -0.63
CAST-220ENST00000508117 GRXCR1A8MXD5 290 aa11.1□□□□□ -0.63
CAST-220ENST00000508117 WDR46O15213 610 aaKnown RBP11.1□□□□□ -0.63
CAST-220ENST00000508117 FLOT1O75955 427 aa11.1□□□□□ -0.63
CAST-220ENST00000508117 GNAI2P04899 355 aa11.1□□□□□ -0.63
CAST-220ENST00000508117 TAL1P17542 331 aaPredicted RBP11.1□□□□□ -0.63
CAST-220ENST00000508117 TMEM132BQ14DG7 1078 aa11.1□□□□□ -0.63
CAST-220ENST00000508117 TMEM179Q6ZVK1 233 aa11.1□□□□□ -0.63
CAST-220ENST00000508117 MIGA1Q8NAN2 632 aa11.1□□□□□ -0.63
CAST-220ENST00000508117 PCSK9Q8NBP7 692 aaKnown RBP11.1□□□□□ -0.63
CAST-220ENST00000508117 HERVK_113Q902F9 699 aa11.1□□□□□ -0.63
CAST-220ENST00000508117 ATG4CQ96DT6 458 aa11.1□□□□□ -0.63
CAST-220ENST00000508117 GLT1D1Q96MS3 346 aa11.1□□□□□ -0.63
CAST-220ENST00000508117 MMP19Q99542 508 aa11.1□□□□□ -0.63
CAST-220ENST00000508117 MTIF3Q9H2K0 278 aaKnown RBP11.1□□□□□ -0.63
CAST-220ENST00000508117 SH2D4AQ9H788 454 aa11.1□□□□□ -0.63
CAST-220ENST00000508117 CNPY2Q9Y2B0 182 aa11.1□□□□□ -0.63
CAST-220ENST00000508117 TMX2Q9Y320 296 aa11.1□□□□□ -0.63
CAST-220ENST00000508117 NAV1Q8NEY1 1877 aa11.1□□□□□ -0.63
CAST-220ENST00000508117 GBF1Q92538 1859 aa11.1□□□□□ -0.63
CAST-220ENST00000508117 SYNRGQ9UMZ2 1314 aa11.09□□□□□ -0.63
CAST-220ENST00000508117 DUSP11O75319 330 aaKnown RBP11.09□□□□□ -0.63
CAST-220ENST00000508117 IDH1O75874 414 aaKnown RBP11.09□□□□□ -0.63
CAST-220ENST00000508117 CSF2RAP15509 400 aa11.09□□□□□ -0.63
CAST-220ENST00000508117 POU3F3P20264 500 aaPredicted RBP11.09□□□□□ -0.63
CAST-220ENST00000508117 IGFBP4P22692 258 aa11.09□□□□□ -0.63
CAST-220ENST00000508117 KCTD2Q14681 263 aa11.09□□□□□ -0.63
CAST-220ENST00000508117 CCDC85BQ15834 202 aaPredicted RBP11.09□□□□□ -0.63
CAST-220ENST00000508117 KCNA10Q16322 511 aa11.09□□□□□ -0.63
CAST-220ENST00000508117 KIAA1755Q5JYT7 1200 aa11.09□□□□□ -0.63
CAST-220ENST00000508117 MAMDC4Q6UXC1 1216 aa11.09□□□□□ -0.63
CAST-220ENST00000508117 ZNF365Q70YC5 407 aa11.09□□□□□ -0.63
CAST-220ENST00000508117 MAGEB6Q8N7X4 407 aa11.09□□□□□ -0.63
CAST-220ENST00000508117 RIOK1Q9BRS2 568 aaKnown RBP11.09□□□□□ -0.63
CAST-220ENST00000508117 VCPKMTQ9H867 229 aa11.09□□□□□ -0.63
CAST-220ENST00000508117 SLC28A3Q9HAS3 691 aa11.09□□□□□ -0.63
CAST-220ENST00000508117 IL23AQ9NPF7 189 aa11.09□□□□□ -0.63
CAST-220ENST00000508117 FAM184BQ9ULE4 1060 aa11.09□□□□□ -0.63
CAST-220ENST00000508117 HCN4Q9Y3Q4 1203 aa11.09□□□□□ -0.63
CAST-220ENST00000508117 MYH8P13535 1937 aa11.09□□□□□ -0.63
CAST-220ENST00000508117 TRANK1O15050 2925 aa11.08□□□□□ -0.64
CAST-220ENST00000508117 A0A0U1RQG5 324 aaPredicted RBP11.08□□□□□ -0.64
CAST-220ENST00000508117 ARVCFO00192 962 aa11.08□□□□□ -0.64
CAST-220ENST00000508117 POLR3DP05423 398 aaPredicted RBP11.08□□□□□ -0.64
CAST-220ENST00000508117 PGK2P07205 417 aa11.08□□□□□ -0.64
CAST-220ENST00000508117 SIAH1Q8IUQ4 282 aa11.08□□□□□ -0.64
CAST-220ENST00000508117 FAM126BQ8IXS8 530 aa11.08□□□□□ -0.64
CAST-220ENST00000508117 HS3ST6Q96QI5 342 aa11.08□□□□□ -0.64
CAST-220ENST00000508117 LRFN3Q9BTN0 628 aa11.08□□□□□ -0.64
CAST-220ENST00000508117 ARHGEF10LQ9HCE6 1279 aa11.08□□□□□ -0.64
CAST-220ENST00000508117 SWAP70Q9UH65 585 aa11.08□□□□□ -0.64
CAST-220ENST00000508117 DBNLQ9UJU6 430 aaKnown RBP11.08□□□□□ -0.64
CAST-220ENST00000508117 MPHOSPH10O00566 681 aaKnown RBP11.07□□□□□ -0.64
CAST-220ENST00000508117 ERC2O15083 957 aa11.07□□□□□ -0.64
CAST-220ENST00000508117 TLR3O15455 904 aaKnown RBP11.07□□□□□ -0.64
CAST-220ENST00000508117 SNAI1O95863 264 aaPredicted RBP11.07□□□□□ -0.64
CAST-220ENST00000508117 ASGR1P07306 291 aa11.07□□□□□ -0.64
CAST-220ENST00000508117 STAT3P40763 770 aa11.07□□□□□ -0.64
CAST-220ENST00000508117 NKX3-2P78367 333 aa11.07□□□□□ -0.64
CAST-220ENST00000508117 TMEM92Q6UXU6 159 aa11.07□□□□□ -0.64
CAST-220ENST00000508117 FBXO22Q8NEZ5 403 aa11.07□□□□□ -0.64
CAST-220ENST00000508117 SSH3Q8TE77 659 aa11.07□□□□□ -0.64
CAST-220ENST00000508117 LENG1Q96BZ8 264 aaPredicted RBP11.07□□□□□ -0.64
CAST-220ENST00000508117 CDCA7LQ96GN5 454 aa11.07□□□□□ -0.64
CAST-220ENST00000508117 NECAB3Q96P71 396 aaPredicted RBP11.07□□□□□ -0.64
CAST-220ENST00000508117 SEZ6LQ9BYH1 1024 aa11.07□□□□□ -0.64
CAST-220ENST00000508117 UPF3AQ9H1J1 476 aaKnown RBP11.07□□□□□ -0.64
CAST-220ENST00000508117 NKX2-4Q9H2Z4 354 aa11.07□□□□□ -0.64
CAST-220ENST00000508117 ZNF214Q9UL59 606 aaPredicted RBP11.07□□□□□ -0.64
CAST-220ENST00000508117 REV3LO60673 3130 aa11.07□□□□□ -0.64
CAST-220ENST00000508117 MUC6Q6W4X9 2439 aa11.07□□□□□ -0.64
CAST-220ENST00000508117 PRRC2BQ5JSZ5 2229 aaKnown RBP11.07□□□□□ -0.64
CAST-220ENST00000508117 DNAJC25-GNG10A0A024R161 153 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms