RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 MED4Q9NPJ6 270 aa15.1■□□□□ 0.01
SNCAIP-209ENST00000508017 ZC3H4Q9UPT8 1303 aaKnown RBP15.1■□□□□ 0.01
SNCAIP-209ENST00000508017 DCCP43146 1447 aa15.1■□□□□ 0.01
SNCAIP-209ENST00000508017 CCDC122Q5T0U0 273 aa15.09■□□□□ 0.01
SNCAIP-209ENST00000508017 SUSD4Q5VX71 490 aa15.09■□□□□ 0.01
SNCAIP-209ENST00000508017 CADPS2Q86UW7 1296 aa15.09■□□□□ 0.01
SNCAIP-209ENST00000508017 ZNF34Q8IZ26 560 aa15.09■□□□□ 0.01
SNCAIP-209ENST00000508017 HPCAL4Q9UM19 191 aa15.09■□□□□ 0.01
SNCAIP-209ENST00000508017 RCCD1A6NED2 376 aa15.09■□□□□ 0.01
SNCAIP-209ENST00000508017 WTIPA6NIX2 430 aaPredicted RBP15.09■□□□□ 0.01
SNCAIP-209ENST00000508017 PRPF6O94906 941 aaKnown RBP15.09■□□□□ 0.01
SNCAIP-209ENST00000508017 TUBBP07437 444 aa15.09■□□□□ 0.01
SNCAIP-209ENST00000508017 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.09■□□□□ 0.01
SNCAIP-209ENST00000508017 DNAJC7Q99615 494 aa15.09■□□□□ 0.01
SNCAIP-209ENST00000508017 ACBD3Q9H3P7 528 aa15.09■□□□□ 0.01
SNCAIP-209ENST00000508017 HAUS4Q9H6D7 363 aa15.09■□□□□ 0.01
SNCAIP-209ENST00000508017 RBM28Q9NW13 759 aaKnown RBP15.09■□□□□ 0.01
SNCAIP-209ENST00000508017 LUC7L2Q9Y383 392 aaKnown RBP15.09■□□□□ 0.01
SNCAIP-209ENST00000508017 SAR1BQ9Y6B6 198 aa15.09■□□□□ 0.01
SNCAIP-209ENST00000508017 LGALS16A8MUM7 142 aa15.08■□□□□ 0.01
SNCAIP-209ENST00000508017 ZNF185O15231 689 aa15.08■□□□□ 0.01
SNCAIP-209ENST00000508017 MYBL2P10244 700 aa15.08■□□□□ 0.01
SNCAIP-209ENST00000508017 AARSP49588 968 aaKnown RBP eCLIP15.08■□□□□ 0.01
SNCAIP-209ENST00000508017 NLRP5P59047 1200 aa15.08■□□□□ 0.01
SNCAIP-209ENST00000508017 EEF2KMTQ96G04 330 aa15.08■□□□□ 0.01
SNCAIP-209ENST00000508017 RIOK1Q9BRS2 568 aaKnown RBP15.08■□□□□ 0.01
SNCAIP-209ENST00000508017 COL4A1P02462 1669 aa15.08■□□□□ 0.01
SNCAIP-209ENST00000508017 DLEC1Q9Y238 1755 aa15.08■□□□□ 0.01
SNCAIP-209ENST00000508017 KLK7P49862 253 aa15.08■□□□□ 0
SNCAIP-209ENST00000508017 EVA1CP58658 441 aa15.08■□□□□ 0
SNCAIP-209ENST00000508017 ADSSL1Q8N142 457 aa15.08■□□□□ 0
SNCAIP-209ENST00000508017 ZNF507Q8TCN5 953 aa15.08■□□□□ 0
SNCAIP-209ENST00000508017 HINFPQ9BQA5 517 aa15.08■□□□□ 0
SNCAIP-209ENST00000508017 LACRTQ9GZZ8 138 aa15.08■□□□□ 0
SNCAIP-209ENST00000508017 GNL3LQ9NVN8 582 aaKnown RBP15.08■□□□□ 0
SNCAIP-209ENST00000508017 PP2D1A8MPX8 630 aa15.07■□□□□ 0
SNCAIP-209ENST00000508017 H7C1D1 291 aa15.07■□□□□ 0
SNCAIP-209ENST00000508017 PDE2AO00408 941 aaPredicted RBP15.07■□□□□ 0
SNCAIP-209ENST00000508017 STAT6P42226 847 aa15.07■□□□□ 0
SNCAIP-209ENST00000508017 PAPD7Q5XG87 772 aaKnown RBP15.07■□□□□ 0
SNCAIP-209ENST00000508017 AFAP1L1Q8TED9 768 aa15.07■□□□□ 0
SNCAIP-209ENST00000508017 VIPAS39Q9H9C1 493 aa15.07■□□□□ 0
SNCAIP-209ENST00000508017 AGPAT5Q9NUQ2 364 aa15.07■□□□□ 0
SNCAIP-209ENST00000508017 RMND1Q9NWS8 449 aa15.07■□□□□ 0
SNCAIP-209ENST00000508017 CAPN11Q9UMQ6 739 aa15.07■□□□□ 0
SNCAIP-209ENST00000508017 EIF3CLB5ME19 914 aaKnown RBP15.07■□□□□ 0
SNCAIP-209ENST00000508017 KIAA1328Q86T90 577 aa15.07■□□□□ 0
SNCAIP-209ENST00000508017 IQCA1Q86XH1 822 aa15.07■□□□□ 0
SNCAIP-209ENST00000508017 JAKMIP2Q96AA8 810 aa15.07■□□□□ 0
SNCAIP-209ENST00000508017 PLIN2Q99541 437 aa15.07■□□□□ 0
SNCAIP-209ENST00000508017 EIF3CQ99613 913 aaKnown RBP15.07■□□□□ 0
SNCAIP-209ENST00000508017 DUSP10Q9Y6W6 482 aa15.07■□□□□ 0
SNCAIP-209ENST00000508017 CACNA1SQ13698 1873 aa15.07■□□□□ 0
SNCAIP-209ENST00000508017 COL1A1P02452 1464 aaPredicted RBP15.07■□□□□ 0
SNCAIP-209ENST00000508017 B4DLN1 442 aa15.06■□□□□ 0
SNCAIP-209ENST00000508017 SCG2P13521 617 aa15.06■□□□□ 0
SNCAIP-209ENST00000508017 TRHP20396 242 aaPredicted RBP15.06■□□□□ 0
SNCAIP-209ENST00000508017 GYG1P46976 350 aa15.06■□□□□ 0
SNCAIP-209ENST00000508017 CHRNDQ07001 517 aa15.06■□□□□ 0
SNCAIP-209ENST00000508017 NAALADL2Q58DX5 795 aa15.06■□□□□ 0
SNCAIP-209ENST00000508017 BRINP3Q76B58 766 aa15.06■□□□□ 0
SNCAIP-209ENST00000508017 C4orf32Q8N8J7 132 aa15.06■□□□□ 0
SNCAIP-209ENST00000508017 RASGRP4Q8TDF6 673 aa15.06■□□□□ 0
SNCAIP-209ENST00000508017 COG1Q8WTW3 980 aa15.06■□□□□ 0
SNCAIP-209ENST00000508017 MKRN1Q9UHC7 482 aaKnown RBP15.06■□□□□ 0
SNCAIP-209ENST00000508017 PDS5AQ29RF7 1337 aaKnown RBP15.06■□□□□ 0
SNCAIP-209ENST00000508017 FAM205AQ6ZU69 1335 aa15.06■□□□□ 0
SNCAIP-209ENST00000508017 RASSF10A6NK89 507 aa15.06■□□□□ 0
SNCAIP-209ENST00000508017 GGCXP38435 758 aa15.06■□□□□ 0
SNCAIP-209ENST00000508017 C2orf54Q08AI8 447 aa15.06■□□□□ 0
SNCAIP-209ENST00000508017 STIM1Q13586 685 aa15.06■□□□□ 0
SNCAIP-209ENST00000508017 SKIDA1Q1XH10 827 aa15.06■□□□□ 0
SNCAIP-209ENST00000508017 FAM47AQ5JRC9 791 aa15.06■□□□□ 0
SNCAIP-209ENST00000508017 A0A1W2PQC6 194 aa15.05■□□□□ 0
SNCAIP-209ENST00000508017 ERVV-1B6SEH8 477 aa15.05■□□□□ 0
SNCAIP-209ENST00000508017 DDAH1O94760 285 aa15.05■□□□□ 0
SNCAIP-209ENST00000508017 CALM1P0DP23 149 aa15.05■□□□□ 0
SNCAIP-209ENST00000508017 CALM2P0DP24 149 aa15.05■□□□□ 0
SNCAIP-209ENST00000508017 CALM3P0DP25 149 aa15.05■□□□□ 0
SNCAIP-209ENST00000508017 NOP2P46087 812 aaKnown RBP15.05■□□□□ 0
SNCAIP-209ENST00000508017 PLCD3Q8N3E9 789 aa15.05■□□□□ 0
SNCAIP-209ENST00000508017 CTCFLQ8NI51 663 aaPredicted RBP15.05■□□□□ 0
SNCAIP-209ENST00000508017 ZNF384Q8TF68 577 aa15.05■□□□□ 0
SNCAIP-209ENST00000508017 TRIM47Q96LD4 638 aa15.05■□□□□ 0
SNCAIP-209ENST00000508017 KLRC4O43908 158 aa15.05■□□□□ -0
SNCAIP-209ENST00000508017 CYP27A1Q02318 531 aa15.05■□□□□ -0
SNCAIP-209ENST00000508017 CTR9Q6PD62 1173 aa15.05■□□□□ -0
SNCAIP-209ENST00000508017 GOLGA6L1Q8N7Z2 621 aa15.05■□□□□ -0
SNCAIP-209ENST00000508017 CAGE1Q8TC20 777 aa15.05■□□□□ -0
SNCAIP-209ENST00000508017 LRRC15Q8TF66 581 aa15.05■□□□□ -0
SNCAIP-209ENST00000508017 PYM1Q9BRP8 204 aaKnown RBP15.05■□□□□ -0
SNCAIP-209ENST00000508017 SELENOOQ9BVL4 669 aa15.05■□□□□ -0
SNCAIP-209ENST00000508017 DISC1Q9NRI5 854 aa15.05■□□□□ -0
SNCAIP-209ENST00000508017 A0A1B0GUL6 1792 aa15.04■□□□□ -0
SNCAIP-209ENST00000508017 MACROD2A1Z1Q3 448 aa15.04■□□□□ -0
SNCAIP-209ENST00000508017 USP17L12C9JPN9 530 aa15.04■□□□□ -0
SNCAIP-209ENST00000508017 USP17L21D6R901 530 aa15.04■□□□□ -0
SNCAIP-209ENST00000508017 AGPSO00116 658 aa15.04■□□□□ -0
SNCAIP-209ENST00000508017 LONP1P36776 959 aaKnown RBP15.04■□□□□ -0
SNCAIP-209ENST00000508017 IGHMBP2P38935 993 aaKnown RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms