RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 LRRC47Q8N1G4 583 aaKnown RBP16.44■□□□□ 0.22
DDX41-208ENST00000507955 PIGSQ96S52 555 aa16.44■□□□□ 0.22
DDX41-208ENST00000507955 ZNF219Q9P2Y4 722 aaPredicted RBP16.44■□□□□ 0.22
DDX41-208ENST00000507955 DDX41Q9UJV9 622 aaKnown RBP16.44■□□□□ 0.22
DDX41-208ENST00000507955 NAV1Q8NEY1 1877 aa16.44■□□□□ 0.22
DDX41-208ENST00000507955 CDK5RAP2Q96SN8 1893 aa16.44■□□□□ 0.22
DDX41-208ENST00000507955 HOXA10P31260 410 aaPredicted RBP16.44■□□□□ 0.22
DDX41-208ENST00000507955 ELF2Q15723 593 aa16.44■□□□□ 0.22
DDX41-208ENST00000507955 FAM177A1Q8N128 213 aaPredicted RBP16.44■□□□□ 0.22
DDX41-208ENST00000507955 LRRC15Q8TF66 581 aa16.44■□□□□ 0.22
DDX41-208ENST00000507955 CPLX3Q8WVH0 158 aa16.44■□□□□ 0.22
DDX41-208ENST00000507955 TMX1Q9H3N1 280 aa16.44■□□□□ 0.22
DDX41-208ENST00000507955 BARHL2Q9NY43 387 aa16.44■□□□□ 0.22
DDX41-208ENST00000507955 OGFRQ9NZT2 677 aa16.44■□□□□ 0.22
DDX41-208ENST00000507955 CTNND2Q9UQB3 1225 aa16.44■□□□□ 0.22
DDX41-208ENST00000507955 DDX60LQ5H9U9 1706 aaKnown RBP16.44■□□□□ 0.22
DDX41-208ENST00000507955 CALML3P27482 149 aa16.43■□□□□ 0.22
DDX41-208ENST00000507955 TCP11L1Q9NUJ3 509 aa16.43■□□□□ 0.22
DDX41-208ENST00000507955 PODXL2Q9NZ53 605 aa16.43■□□□□ 0.22
DDX41-208ENST00000507955 NAPAP54920 295 aa16.43■□□□□ 0.22
DDX41-208ENST00000507955 COL23A1Q86Y22 540 aaPredicted RBP16.43■□□□□ 0.22
DDX41-208ENST00000507955 TRIML1Q8N9V2 468 aa16.43■□□□□ 0.22
DDX41-208ENST00000507955 IQUBQ8NA54 791 aa16.43■□□□□ 0.22
DDX41-208ENST00000507955 KIF18AQ8NI77 898 aa16.43■□□□□ 0.22
DDX41-208ENST00000507955 GDAQ9Y2T3 454 aa16.43■□□□□ 0.22
DDX41-208ENST00000507955 BMP15O95972 392 aa16.42■□□□□ 0.22
DDX41-208ENST00000507955 PARP1P09874 1014 aaKnown RBP16.42■□□□□ 0.22
DDX41-208ENST00000507955 CACNB3P54284 484 aa16.42■□□□□ 0.22
DDX41-208ENST00000507955 LETM2Q2VYF4 491 aa16.42■□□□□ 0.22
DDX41-208ENST00000507955 NEDD1Q8NHV4 660 aa16.42■□□□□ 0.22
DDX41-208ENST00000507955 EEF2KMTQ96G04 330 aa16.42■□□□□ 0.22
DDX41-208ENST00000507955 TMEM260Q9NX78 707 aa16.42■□□□□ 0.22
DDX41-208ENST00000507955 BIN2Q9UBW5 565 aaPredicted RBP16.42■□□□□ 0.22
DDX41-208ENST00000507955 TTF2Q9UNY4 1162 aaKnown RBP16.42■□□□□ 0.22
DDX41-208ENST00000507955 SYNRGQ9UMZ2 1314 aa16.42■□□□□ 0.22
DDX41-208ENST00000507955 AKR1B1P15121 316 aa16.42■□□□□ 0.22
DDX41-208ENST00000507955 TRAPPC10P48553 1259 aa16.42■□□□□ 0.22
DDX41-208ENST00000507955 SHROOM1Q2M3G4 852 aaPredicted RBP16.42■□□□□ 0.22
DDX41-208ENST00000507955 SLC27A3Q5K4L6 730 aa16.42■□□□□ 0.22
DDX41-208ENST00000507955 RRAGBQ5VZM2 374 aa16.42■□□□□ 0.22
DDX41-208ENST00000507955 FBXO38Q6PIJ6 1188 aa16.42■□□□□ 0.22
DDX41-208ENST00000507955 APTXQ7Z2E3 356 aaKnown RBP16.42■□□□□ 0.22
DDX41-208ENST00000507955 TMEM139Q8IV31 216 aa16.42■□□□□ 0.22
DDX41-208ENST00000507955 RASSF8Q8NHQ8 419 aa16.42■□□□□ 0.22
DDX41-208ENST00000507955 DACH1Q9UI36 760 aa16.42■□□□□ 0.22
DDX41-208ENST00000507955 SMCO2A6NFE2 343 aa16.41■□□□□ 0.22
DDX41-208ENST00000507955 FAM196BA6NMK8 535 aa16.41■□□□□ 0.22
DDX41-208ENST00000507955 FANCGO15287 622 aa16.41■□□□□ 0.22
DDX41-208ENST00000507955 CCT6AP40227 531 aaKnown RBP16.41■□□□□ 0.22
DDX41-208ENST00000507955 JAKMIP3Q5VZ66 844 aa16.41■□□□□ 0.22
DDX41-208ENST00000507955 TC2NQ8N9U0 490 aa16.41■□□□□ 0.22
DDX41-208ENST00000507955 CRAMP1Q96RY5 1269 aa16.41■□□□□ 0.22
DDX41-208ENST00000507955 NR1I3Q14994 352 aa16.41■□□□□ 0.22
DDX41-208ENST00000507955 NAALADL2Q58DX5 795 aa16.41■□□□□ 0.22
DDX41-208ENST00000507955 DPP8Q6V1X1 898 aaPredicted RBP16.41■□□□□ 0.22
DDX41-208ENST00000507955 ZFPM1Q8IX07 1006 aa16.41■□□□□ 0.22
DDX41-208ENST00000507955 COA7Q96BR5 231 aa16.41■□□□□ 0.22
DDX41-208ENST00000507955 ERO1AQ96HE7 468 aa16.41■□□□□ 0.22
DDX41-208ENST00000507955 GSDMAQ96QA5 445 aa16.41■□□□□ 0.22
DDX41-208ENST00000507955 GTPBP4Q9BZE4 634 aaKnown RBP16.41■□□□□ 0.22
DDX41-208ENST00000507955 ZC3H12CQ9C0D7 883 aaKnown RBP16.41■□□□□ 0.22
DDX41-208ENST00000507955 DBNDD1Q9H9R9 158 aa16.41■□□□□ 0.22
DDX41-208ENST00000507955 GAKO14976 1311 aa16.41■□□□□ 0.22
DDX41-208ENST00000507955 CCNT1O60563 726 aaKnown RBP16.4■□□□□ 0.22
DDX41-208ENST00000507955 SLU7O95391 586 aaKnown RBP16.4■□□□□ 0.22
DDX41-208ENST00000507955 GNAQP50148 359 aa16.4■□□□□ 0.22
DDX41-208ENST00000507955 TBX2Q13207 712 aaPredicted RBP16.4■□□□□ 0.22
DDX41-208ENST00000507955 MTF1Q14872 753 aa16.4■□□□□ 0.22
DDX41-208ENST00000507955 SPECC1LQ69YQ0 1117 aa16.4■□□□□ 0.22
DDX41-208ENST00000507955 DTHD1Q6ZMT9 781 aa16.4■□□□□ 0.22
DDX41-208ENST00000507955 UIMC1Q96RL1 719 aa16.4■□□□□ 0.22
DDX41-208ENST00000507955 DESI2Q9BSY9 194 aa16.4■□□□□ 0.22
DDX41-208ENST00000507955 GPCPD1Q9NPB8 672 aa16.4■□□□□ 0.22
DDX41-208ENST00000507955 SH3GLB2Q9NR46 395 aa16.4■□□□□ 0.22
DDX41-208ENST00000507955 SRGNP10124 158 aa16.4■□□□□ 0.22
DDX41-208ENST00000507955 ERCC5P28715 1186 aaPredicted RBP16.4■□□□□ 0.22
DDX41-208ENST00000507955 STAT6P42226 847 aa16.4■□□□□ 0.22
DDX41-208ENST00000507955 ATP2B2Q01814 1243 aa16.4■□□□□ 0.22
DDX41-208ENST00000507955 NFIAQ12857 509 aa16.4■□□□□ 0.22
DDX41-208ENST00000507955 SPATA1Q5VX52 437 aa16.4■□□□□ 0.22
DDX41-208ENST00000507955 TMED8Q6PL24 325 aaPredicted RBP16.4■□□□□ 0.22
DDX41-208ENST00000507955 TOGARAM2Q6ZUX3 1019 aa16.4■□□□□ 0.22
DDX41-208ENST00000507955 SP8Q8IXZ3 490 aa16.4■□□□□ 0.22
DDX41-208ENST00000507955 ATP6V0A2Q9Y487 856 aa16.4■□□□□ 0.22
DDX41-208ENST00000507955 MYH1P12882 1939 aa16.39■□□□□ 0.21
DDX41-208ENST00000507955 TRIM49BA6NDI0 452 aa16.39■□□□□ 0.21
DDX41-208ENST00000507955 DHX8Q14562 1220 aaKnown RBP16.39■□□□□ 0.21
DDX41-208ENST00000507955 ZNF397Q8NF99 534 aaPredicted RBP16.39■□□□□ 0.21
DDX41-208ENST00000507955 FAM163AQ96GL9 167 aaPredicted RBP16.39■□□□□ 0.21
DDX41-208ENST00000507955 L2HGDHQ9H9P8 463 aa16.39■□□□□ 0.21
DDX41-208ENST00000507955 USP40Q9NVE5 1235 aa16.39■□□□□ 0.21
DDX41-208ENST00000507955 MORC2Q9Y6X9 1032 aaPredicted RBP16.39■□□□□ 0.21
DDX41-208ENST00000507955 KLRG2A4D1S0 409 aaPredicted RBP16.39■□□□□ 0.21
DDX41-208ENST00000507955 PSDA5PKW4 1024 aaPredicted RBP16.39■□□□□ 0.21
DDX41-208ENST00000507955 RAD21O60216 631 aa16.39■□□□□ 0.21
DDX41-208ENST00000507955 CCDC93Q567U6 631 aa16.39■□□□□ 0.21
DDX41-208ENST00000507955 ZNF287Q9HBT7 754 aa16.39■□□□□ 0.21
DDX41-208ENST00000507955 BRWD3Q6RI45 1802 aa16.39■□□□□ 0.21
DDX41-208ENST00000507955 A0A0U1RQJ8 604 aa16.38■□□□□ 0.21
DDX41-208ENST00000507955 MMP10P09238 476 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms