RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 FAM126BQ8IXS8 530 aa16.84■□□□□ 0.29
DDR1-260ENST00000507533 TRMT2AQ8IZ69 625 aaKnown RBP16.84■□□□□ 0.29
DDR1-260ENST00000507533 MSL3Q8N5Y2 521 aaKnown RBP16.84■□□□□ 0.29
DDR1-260ENST00000507533 PCSK9Q8NBP7 692 aaKnown RBP16.84■□□□□ 0.29
DDR1-260ENST00000507533 CCDC8Q9H0W5 538 aaPredicted RBP16.84■□□□□ 0.29
DDR1-260ENST00000507533 ANTXR1Q9H6X2 564 aa16.84■□□□□ 0.29
DDR1-260ENST00000507533 FBXO28Q9NVF7 368 aa16.84■□□□□ 0.29
DDR1-260ENST00000507533 TLR7Q9NYK1 1049 aaKnown RBP16.84■□□□□ 0.29
DDR1-260ENST00000507533 MAGEB6P1A0A0J9YX57 407 aa16.83■□□□□ 0.28
DDR1-260ENST00000507533 ERC2O15083 957 aa16.83■□□□□ 0.28
DDR1-260ENST00000507533 COPB2P35606 906 aa16.83■□□□□ 0.28
DDR1-260ENST00000507533 RABGGTBP53611 331 aa16.83■□□□□ 0.28
DDR1-260ENST00000507533 ICA1Q05084 483 aa16.83■□□□□ 0.28
DDR1-260ENST00000507533 TMEM31Q5JXX7 168 aa16.83■□□□□ 0.28
DDR1-260ENST00000507533 PPP2R2DQ66LE6 453 aa16.83■□□□□ 0.28
DDR1-260ENST00000507533 TMED8Q6PL24 325 aaPredicted RBP16.83■□□□□ 0.28
DDR1-260ENST00000507533 OTOP2Q7RTS6 562 aa16.83■□□□□ 0.28
DDR1-260ENST00000507533 SPC25Q9HBM1 224 aa16.83■□□□□ 0.28
DDR1-260ENST00000507533 REV3LO60673 3130 aa16.83■□□□□ 0.28
DDR1-260ENST00000507533 MYO5AQ9Y4I1 1855 aaKnown RBP16.82■□□□□ 0.28
DDR1-260ENST00000507533 VWA5AO00534 786 aa16.82■□□□□ 0.28
DDR1-260ENST00000507533 SURF6O75683 361 aaKnown RBP16.82■□□□□ 0.28
DDR1-260ENST00000507533 CYP2D6P10635 497 aa16.82■□□□□ 0.28
DDR1-260ENST00000507533 AKR1B1P15121 316 aa16.82■□□□□ 0.28
DDR1-260ENST00000507533 POLA2Q14181 598 aa16.82■□□□□ 0.28
DDR1-260ENST00000507533 CRNKL1Q9BZJ0 848 aaKnown RBP16.82■□□□□ 0.28
DDR1-260ENST00000507533 SWAP70Q9UH65 585 aa16.82■□□□□ 0.28
DDR1-260ENST00000507533 ZNF214Q9UL59 606 aaPredicted RBP16.82■□□□□ 0.28
DDR1-260ENST00000507533 CD4P01730 458 aa16.81■□□□□ 0.28
DDR1-260ENST00000507533 RARSP54136 660 aaKnown RBP16.81■□□□□ 0.28
DDR1-260ENST00000507533 GJA9P57773 515 aa16.81■□□□□ 0.28
DDR1-260ENST00000507533 ACVR2BQ13705 512 aa16.81■□□□□ 0.28
DDR1-260ENST00000507533 GNASQ5JWF2 1037 aa16.81■□□□□ 0.28
DDR1-260ENST00000507533 MAMDC4Q6UXC1 1216 aa16.81■□□□□ 0.28
DDR1-260ENST00000507533 DDX11Q96FC9 970 aa16.81■□□□□ 0.28
DDR1-260ENST00000507533 DYNLL2Q96FJ2 89 aa16.81■□□□□ 0.28
DDR1-260ENST00000507533 PPP1R9AQ9ULJ8 1098 aa16.81■□□□□ 0.28
DDR1-260ENST00000507533 TCF20Q9UGU0 1960 aaKnown RBP16.8■□□□□ 0.28
DDR1-260ENST00000507533 MYO9BQ13459 2157 aa16.8■□□□□ 0.28
DDR1-260ENST00000507533 MYOGP15173 224 aa16.8■□□□□ 0.28
DDR1-260ENST00000507533 REPS2Q8NFH8 660 aa16.8■□□□□ 0.28
DDR1-260ENST00000507533 EAF2Q96CJ1 260 aaPredicted RBP16.8■□□□□ 0.28
DDR1-260ENST00000507533 UPF3AQ9H1J1 476 aaKnown RBP16.8■□□□□ 0.28
DDR1-260ENST00000507533 HIPK3Q9H422 1215 aa16.8■□□□□ 0.28
DDR1-260ENST00000507533 PCDHA11Q9Y5I1 949 aa16.8■□□□□ 0.28
DDR1-260ENST00000507533 SLC4A7Q9Y6M7 1214 aa16.8■□□□□ 0.28
DDR1-260ENST00000507533 ZNFX1Q9P2E3 1918 aaKnown RBP16.8■□□□□ 0.28
DDR1-260ENST00000507533 ADCY6O43306 1168 aa16.79■□□□□ 0.28
DDR1-260ENST00000507533 BCAR3O75815 825 aa16.79■□□□□ 0.28
DDR1-260ENST00000507533 CCL23P55773 120 aa16.79■□□□□ 0.28
DDR1-260ENST00000507533 CCDC144BQ3MJ40 725 aa16.79■□□□□ 0.28
DDR1-260ENST00000507533 SSH3Q8TE77 659 aa16.79■□□□□ 0.28
DDR1-260ENST00000507533 SDR42E1Q8WUS8 393 aa16.79■□□□□ 0.28
DDR1-260ENST00000507533 DCP1AQ9NPI6 582 aaPredicted RBP16.79■□□□□ 0.28
DDR1-260ENST00000507533 MTCH2Q9Y6C9 303 aa16.79■□□□□ 0.28
DDR1-260ENST00000507533 UMODL1Q5DID0 1318 aa16.78■□□□□ 0.28
DDR1-260ENST00000507533 DNAJC25-GNG10A0A024R161 153 aa16.78■□□□□ 0.28
DDR1-260ENST00000507533 RFXAPO00287 272 aa16.78■□□□□ 0.28
DDR1-260ENST00000507533 GTPBP6O43824 516 aaPredicted RBP16.78■□□□□ 0.28
DDR1-260ENST00000507533 TLL1O43897 1013 aa16.78■□□□□ 0.28
DDR1-260ENST00000507533 RAD21O60216 631 aa16.78■□□□□ 0.28
DDR1-260ENST00000507533 EEF2P13639 858 aaKnown RBP16.78■□□□□ 0.28
DDR1-260ENST00000507533 ATP8B2P98198 1209 aa16.78■□□□□ 0.28
DDR1-260ENST00000507533 ZNF467Q7Z7K2 595 aaPredicted RBP16.78■□□□□ 0.28
DDR1-260ENST00000507533 CCDC17Q96LX7 622 aa16.78■□□□□ 0.28
DDR1-260ENST00000507533 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.78■□□□□ 0.28
DDR1-260ENST00000507533 COG5Q9UP83 839 aa16.78■□□□□ 0.28
DDR1-260ENST00000507533 TNNQ9UQP3 1299 aa16.78■□□□□ 0.28
DDR1-260ENST00000507533 ZBBXA8MT70 800 aa16.77■□□□□ 0.28
DDR1-260ENST00000507533 IPO8O15397 1037 aaKnown RBP16.77■□□□□ 0.28
DDR1-260ENST00000507533 GPR37L1O60883 481 aa16.77■□□□□ 0.28
DDR1-260ENST00000507533 TRIM27P14373 513 aa16.77■□□□□ 0.28
DDR1-260ENST00000507533 POU3F3P20264 500 aaPredicted RBP16.77■□□□□ 0.28
DDR1-260ENST00000507533 FAM83BQ5T0W9 1011 aa16.77■□□□□ 0.28
DDR1-260ENST00000507533 SLC9C2Q5TAH2 1124 aa16.77■□□□□ 0.28
DDR1-260ENST00000507533 SNRNP48Q6IEG0 339 aaKnown RBP16.77■□□□□ 0.28
DDR1-260ENST00000507533 ALYREFQ86V81 257 aaKnown RBP16.77■□□□□ 0.28
DDR1-260ENST00000507533 RPUSD2Q8IZ73 545 aaKnown RBP16.77■□□□□ 0.28
DDR1-260ENST00000507533 SLC43A3Q8NBI5 491 aa16.77■□□□□ 0.28
DDR1-260ENST00000507533 TEX13BQ9BXU2 312 aa16.77■□□□□ 0.28
DDR1-260ENST00000507533 ABHD16BQ9H3Z7 469 aa16.77■□□□□ 0.28
DDR1-260ENST00000507533 GOPCQ9HD26 462 aa16.77■□□□□ 0.28
DDR1-260ENST00000507533 RIPK3Q9Y572 518 aa16.77■□□□□ 0.28
DDR1-260ENST00000507533 FAM86C2PA6NEL3 165 aa16.76■□□□□ 0.27
DDR1-260ENST00000507533 CTAGE5O15320 804 aa16.76■□□□□ 0.27
DDR1-260ENST00000507533 PDE6AP16499 860 aa16.76■□□□□ 0.27
DDR1-260ENST00000507533 ATP2A2P16615 1042 aaKnown RBP16.76■□□□□ 0.27
DDR1-260ENST00000507533 SLC4A3P48751 1232 aa16.76■□□□□ 0.27
DDR1-260ENST00000507533 BEX3Q00994 111 aa16.76■□□□□ 0.27
DDR1-260ENST00000507533 LCORLQ8N3X6 602 aa16.76■□□□□ 0.27
DDR1-260ENST00000507533 KANSL2Q9H9L4 492 aa16.76■□□□□ 0.27
DDR1-260ENST00000507533 C11orf16Q9NQ32 467 aa16.76■□□□□ 0.27
DDR1-260ENST00000507533 NOP58Q9Y2X3 529 aaKnown RBP16.76■□□□□ 0.27
DDR1-260ENST00000507533 CDK8P49336 464 aa16.75■□□□□ 0.27
DDR1-260ENST00000507533 CXCL17Q6UXB2 119 aa16.75■□□□□ 0.27
DDR1-260ENST00000507533 KHSRPQ92945 711 aaKnown RBP eCLIP16.75■□□□□ 0.27
DDR1-260ENST00000507533 CLUAP1Q96AJ1 413 aa16.75■□□□□ 0.27
DDR1-260ENST00000507533 NOC4LQ9BVI4 516 aaKnown RBP16.75■□□□□ 0.27
DDR1-260ENST00000507533 WNT8AQ9H1J5 351 aa16.75■□□□□ 0.27
DDR1-260ENST00000507533 CERS4Q9HA82 394 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms