RNA–Protein interactions for RNA: ENST00000507485.1

RPS3A-206, Transcript of ribosomal protein S3A, humanhuman

TSL 1 (best)

Gene RPS3A, Length 1,526 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-206ENST00000507485 PADI6Q6TGC4 694 aa10.92□□□□□ -0.66
RPS3A-206ENST00000507485 TTC13Q8NBP0 860 aa10.92□□□□□ -0.66
RPS3A-206ENST00000507485 SPRYD3Q8NCJ5 442 aa10.92□□□□□ -0.66
RPS3A-206ENST00000507485 GTF3C2Q8WUA4 911 aaPredicted RBP10.92□□□□□ -0.66
RPS3A-206ENST00000507485 DNAJC2Q99543 621 aaKnown RBP10.92□□□□□ -0.66
RPS3A-206ENST00000507485 ARMT1Q9H993 441 aa10.92□□□□□ -0.66
RPS3A-206ENST00000507485 DCP1AQ9NPI6 582 aaPredicted RBP10.92□□□□□ -0.66
RPS3A-206ENST00000507485 COL6A3P12111 3177 aa10.92□□□□□ -0.66
RPS3A-206ENST00000507485 ZNF236Q9UL36 1845 aa10.92□□□□□ -0.66
RPS3A-206ENST00000507485 POLR3DP05423 398 aaPredicted RBP10.91□□□□□ -0.66
RPS3A-206ENST00000507485 HOXC6P09630 235 aa10.91□□□□□ -0.66
RPS3A-206ENST00000507485 USP14P54578 494 aa10.91□□□□□ -0.66
RPS3A-206ENST00000507485 WDR78Q5VTH9 848 aa10.91□□□□□ -0.66
RPS3A-206ENST00000507485 ERC1Q8IUD2 1116 aa10.91□□□□□ -0.66
RPS3A-206ENST00000507485 TRMT44Q8IYL2 757 aaKnown RBP10.91□□□□□ -0.66
RPS3A-206ENST00000507485 MOV10L1Q9BXT6 1211 aaKnown RBP10.91□□□□□ -0.66
RPS3A-206ENST00000507485 BCL11AQ9H165 835 aa10.91□□□□□ -0.66
RPS3A-206ENST00000507485 MCM9Q9NXL9 1143 aa10.91□□□□□ -0.66
RPS3A-206ENST00000507485 COBLO75128 1261 aa10.9□□□□□ -0.66
RPS3A-206ENST00000507485 DGAT1O75907 488 aa10.9□□□□□ -0.66
RPS3A-206ENST00000507485 AKR1B1P15121 316 aa10.9□□□□□ -0.66
RPS3A-206ENST00000507485 SLC19A1P41440 591 aa10.9□□□□□ -0.66
RPS3A-206ENST00000507485 CERS3Q8IU89 383 aa10.9□□□□□ -0.66
RPS3A-206ENST00000507485 CCAR1Q8IX12 1150 aaKnown RBP10.9□□□□□ -0.66
RPS3A-206ENST00000507485 CRNKL1Q9BZJ0 848 aaKnown RBP10.9□□□□□ -0.66
RPS3A-206ENST00000507485 CABP5Q9NP86 173 aa10.9□□□□□ -0.66
RPS3A-206ENST00000507485 ZBTB40Q9NUA8 1239 aa10.9□□□□□ -0.66
RPS3A-206ENST00000507485 COG6Q9Y2V7 657 aa10.9□□□□□ -0.66
RPS3A-206ENST00000507485 PCDHB3Q9Y5E6 796 aa10.9□□□□□ -0.66
RPS3A-206ENST00000507485 ZBED9Q6R2W3 1325 aa10.9□□□□□ -0.66
RPS3A-206ENST00000507485 LTBP2Q14767 1821 aa10.9□□□□□ -0.66
RPS3A-206ENST00000507485 MYH8P13535 1937 aa10.9□□□□□ -0.66
RPS3A-206ENST00000507485 MPHOSPH10O00566 681 aaKnown RBP10.89□□□□□ -0.67
RPS3A-206ENST00000507485 CYBAP13498 195 aa10.89□□□□□ -0.67
RPS3A-206ENST00000507485 MDM2Q00987 491 aaPredicted RBP10.89□□□□□ -0.67
RPS3A-206ENST00000507485 LRIT3Q3SXY7 679 aa10.89□□□□□ -0.67
RPS3A-206ENST00000507485 PKDCCQ504Y2 493 aa10.89□□□□□ -0.67
RPS3A-206ENST00000507485 TDHQ8IZJ6 230 aa10.89□□□□□ -0.67
RPS3A-206ENST00000507485 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.89□□□□□ -0.67
RPS3A-206ENST00000507485 DDX20Q9UHI6 824 aaKnown RBP10.89□□□□□ -0.67
RPS3A-206ENST00000507485 COL11A1P12107 1806 aaPredicted RBP10.89□□□□□ -0.67
RPS3A-206ENST00000507485 MBD4O95243 580 aa10.89□□□□□ -0.67
RPS3A-206ENST00000507485 ADORA2AP29274 412 aa10.89□□□□□ -0.67
RPS3A-206ENST00000507485 ADD2P35612 726 aa10.89□□□□□ -0.67
RPS3A-206ENST00000507485 CCNA1P78396 465 aa10.89□□□□□ -0.67
RPS3A-206ENST00000507485 TTF1Q15361 905 aaPredicted RBP10.89□□□□□ -0.67
RPS3A-206ENST00000507485 MFSD14CQ5VZR4 134 aa10.89□□□□□ -0.67
RPS3A-206ENST00000507485 ANO1Q5XXA6 986 aa10.89□□□□□ -0.67
RPS3A-206ENST00000507485 TMED8Q6PL24 325 aaPredicted RBP10.89□□□□□ -0.67
RPS3A-206ENST00000507485 SPICE1Q8N0Z3 855 aa10.89□□□□□ -0.67
RPS3A-206ENST00000507485 CLASRPQ8N2M8 674 aaKnown RBP10.89□□□□□ -0.67
RPS3A-206ENST00000507485 ATG4CQ96DT6 458 aa10.89□□□□□ -0.67
RPS3A-206ENST00000507485 KIF1BPQ96EK5 621 aa10.89□□□□□ -0.67
RPS3A-206ENST00000507485 UBE2OQ9C0C9 1292 aaKnown RBP10.89□□□□□ -0.67
RPS3A-206ENST00000507485 SENP6Q9GZR1 1112 aaPredicted RBP10.89□□□□□ -0.67
RPS3A-206ENST00000507485 SPATC1LQ9H0A9 340 aa10.89□□□□□ -0.67
RPS3A-206ENST00000507485 BOLA2Q9H3K6 86 aa10.89□□□□□ -0.67
RPS3A-206ENST00000507485 CWC22Q9HCG8 908 aaKnown RBP10.89□□□□□ -0.67
RPS3A-206ENST00000507485 DNAH12Q6ZR08 3092 aa10.88□□□□□ -0.67
RPS3A-206ENST00000507485 MYH7P12883 1935 aa10.88□□□□□ -0.67
RPS3A-206ENST00000507485 ERCC3P19447 782 aa10.88□□□□□ -0.67
RPS3A-206ENST00000507485 CNGA1P29973 690 aa10.88□□□□□ -0.67
RPS3A-206ENST00000507485 ATP2B2Q01814 1243 aa10.88□□□□□ -0.67
RPS3A-206ENST00000507485 COG2Q14746 738 aa10.88□□□□□ -0.67
RPS3A-206ENST00000507485 HSP90AB4PQ58FF6 505 aa10.88□□□□□ -0.67
RPS3A-206ENST00000507485 PRAMEF19Q5SWL8 479 aa10.88□□□□□ -0.67
RPS3A-206ENST00000507485 GJC2Q5T442 439 aaPredicted RBP10.88□□□□□ -0.67
RPS3A-206ENST00000507485 C20orf194Q5TEA3 1177 aa10.88□□□□□ -0.67
RPS3A-206ENST00000507485 TRIM67Q6ZTA4 783 aa10.88□□□□□ -0.67
RPS3A-206ENST00000507485 RPAP2Q8IXW5 612 aaPredicted RBP10.88□□□□□ -0.67
RPS3A-206ENST00000507485 DEFB123Q8N688 67 aa10.88□□□□□ -0.67
RPS3A-206ENST00000507485 TANGO6Q9C0B7 1094 aa10.88□□□□□ -0.67
RPS3A-206ENST00000507485 PAG1Q9NWQ8 432 aa10.88□□□□□ -0.67
RPS3A-206ENST00000507485 GREB1LQ9C091 1923 aaPredicted RBP10.88□□□□□ -0.67
RPS3A-206ENST00000507485 ZNFX1Q9P2E3 1918 aaKnown RBP10.87□□□□□ -0.67
RPS3A-206ENST00000507485 SMARCA5O60264 1052 aaPredicted RBP10.87□□□□□ -0.67
RPS3A-206ENST00000507485 GLRX3O76003 335 aaKnown RBP10.87□□□□□ -0.67
RPS3A-206ENST00000507485 IFIT2P09913 472 aaKnown RBP10.87□□□□□ -0.67
RPS3A-206ENST00000507485 ATP5JP18859 108 aa10.87□□□□□ -0.67
RPS3A-206ENST00000507485 CDK8P49336 464 aa10.87□□□□□ -0.67
RPS3A-206ENST00000507485 PRR20EP86478 221 aa10.87□□□□□ -0.67
RPS3A-206ENST00000507485 PRR20CP86479 221 aa10.87□□□□□ -0.67
RPS3A-206ENST00000507485 PRR20DP86480 221 aa10.87□□□□□ -0.67
RPS3A-206ENST00000507485 PRR20BP86481 221 aa10.87□□□□□ -0.67
RPS3A-206ENST00000507485 PRR20AP86496 221 aa10.87□□□□□ -0.67
RPS3A-206ENST00000507485 C12orf60Q5U649 245 aa10.87□□□□□ -0.67
RPS3A-206ENST00000507485 TMEM179Q6ZVK1 233 aa10.87□□□□□ -0.67
RPS3A-206ENST00000507485 SLC17A8Q8NDX2 589 aa10.87□□□□□ -0.67
RPS3A-206ENST00000507485 LPAR1Q92633 364 aa10.87□□□□□ -0.67
RPS3A-206ENST00000507485 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.87□□□□□ -0.67
RPS3A-206ENST00000507485 FBXO28Q9NVF7 368 aa10.87□□□□□ -0.67
RPS3A-206ENST00000507485 MTMR10Q9NXD2 777 aa10.87□□□□□ -0.67
RPS3A-206ENST00000507485 TMX2Q9Y320 296 aa10.87□□□□□ -0.67
RPS3A-206ENST00000507485 IVNS1ABPQ9Y6Y0 642 aa10.87□□□□□ -0.67
RPS3A-206ENST00000507485 USP17L12C9JPN9 530 aa10.86□□□□□ -0.67
RPS3A-206ENST00000507485 USP17L21D6R901 530 aa10.86□□□□□ -0.67
RPS3A-206ENST00000507485 RNF223E7ERA6 249 aa10.86□□□□□ -0.67
RPS3A-206ENST00000507485 ICA1Q05084 483 aa10.86□□□□□ -0.67
RPS3A-206ENST00000507485 TMEM132BQ14DG7 1078 aa10.86□□□□□ -0.67
RPS3A-206ENST00000507485 OLFML2BQ68BL8 750 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms