RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 HOXC10Q9NYD6 342 aa6.99□□□□□ -1.29
GYPB-208ENST00000507009 DBNLQ9UJU6 430 aaKnown RBP6.99□□□□□ -1.29
GYPB-208ENST00000507009 ZNFX1Q9P2E3 1918 aaKnown RBP6.99□□□□□ -1.29
GYPB-208ENST00000507009 COL11A1P12107 1806 aaPredicted RBP6.99□□□□□ -1.29
GYPB-208ENST00000507009 ZNF236Q9UL36 1845 aa6.99□□□□□ -1.29
GYPB-208ENST00000507009 STRNO43815 780 aa6.98□□□□□ -1.29
GYPB-208ENST00000507009 TAL1P17542 331 aaPredicted RBP6.98□□□□□ -1.29
GYPB-208ENST00000507009 COL9A1P20849 921 aa6.98□□□□□ -1.29
GYPB-208ENST00000507009 DNAJB2P25686 324 aa6.98□□□□□ -1.29
GYPB-208ENST00000507009 FPGSQ05932 587 aa6.98□□□□□ -1.29
GYPB-208ENST00000507009 CCDC85BQ15834 202 aaPredicted RBP6.98□□□□□ -1.29
GYPB-208ENST00000507009 KIAA1755Q5JYT7 1200 aa6.98□□□□□ -1.29
GYPB-208ENST00000507009 RNF180Q86T96 592 aa6.98□□□□□ -1.29
GYPB-208ENST00000507009 AACSQ86V21 672 aa6.98□□□□□ -1.29
GYPB-208ENST00000507009 TRMT2AQ8IZ69 625 aaKnown RBP6.98□□□□□ -1.29
GYPB-208ENST00000507009 SDR42E1Q8WUS8 393 aa6.98□□□□□ -1.29
GYPB-208ENST00000507009 ARHGAP45Q92619 1136 aa6.98□□□□□ -1.29
GYPB-208ENST00000507009 VTI1AQ96AJ9 217 aa6.98□□□□□ -1.29
GYPB-208ENST00000507009 EAF2Q96CJ1 260 aaPredicted RBP6.98□□□□□ -1.29
GYPB-208ENST00000507009 KCTD12Q96CX2 325 aaKnown RBP6.98□□□□□ -1.29
GYPB-208ENST00000507009 DYNLL2Q96FJ2 89 aa6.98□□□□□ -1.29
GYPB-208ENST00000507009 MMP19Q99542 508 aa6.98□□□□□ -1.29
GYPB-208ENST00000507009 DNAJC2Q99543 621 aaKnown RBP6.98□□□□□ -1.29
GYPB-208ENST00000507009 CRNKL1Q9BZJ0 848 aaKnown RBP6.98□□□□□ -1.29
GYPB-208ENST00000507009 EHD4Q9H223 541 aa6.98□□□□□ -1.29
GYPB-208ENST00000507009 MROH8Q9H579 483 aa6.98□□□□□ -1.29
GYPB-208ENST00000507009 ARHGEF10LQ9HCE6 1279 aa6.98□□□□□ -1.29
GYPB-208ENST00000507009 PLA2G2EQ9NZK7 142 aa6.98□□□□□ -1.29
GYPB-208ENST00000507009 TACC3Q9Y6A5 838 aa6.98□□□□□ -1.29
GYPB-208ENST00000507009 A0A0G2JMZ2 1700 aa6.98□□□□□ -1.29
GYPB-208ENST00000507009 PLXNA1Q9UIW2 1896 aa6.98□□□□□ -1.29
GYPB-208ENST00000507009 TMEM265A0A087WTH1 108 aa6.97□□□□□ -1.29
GYPB-208ENST00000507009 A0A1W2PQ45 241 aaPredicted RBP6.97□□□□□ -1.29
GYPB-208ENST00000507009 A0A1W2PQY0 241 aa6.97□□□□□ -1.29
GYPB-208ENST00000507009 SMCHD1A6NHR9 2005 aa6.97□□□□□ -1.29
GYPB-208ENST00000507009 GRXCR1A8MXD5 290 aa6.97□□□□□ -1.29
GYPB-208ENST00000507009 TNFRSF10AO00220 468 aa6.97□□□□□ -1.29
GYPB-208ENST00000507009 AKR1B1P15121 316 aa6.97□□□□□ -1.29
GYPB-208ENST00000507009 IGFBP4P22692 258 aa6.97□□□□□ -1.29
GYPB-208ENST00000507009 FOSBP53539 338 aa6.97□□□□□ -1.29
GYPB-208ENST00000507009 ATP8B2P98198 1209 aa6.97□□□□□ -1.29
GYPB-208ENST00000507009 ICA1Q05084 483 aa6.97□□□□□ -1.29
GYPB-208ENST00000507009 KCTD2Q14681 263 aa6.97□□□□□ -1.29
GYPB-208ENST00000507009 TMEM132BQ14DG7 1078 aa6.97□□□□□ -1.29
GYPB-208ENST00000507009 TJAP1Q5JTD0 557 aa6.97□□□□□ -1.29
GYPB-208ENST00000507009 SLC9C2Q5TAH2 1124 aa6.97□□□□□ -1.29
GYPB-208ENST00000507009 ITPRIPQ8IWB1 547 aa6.97□□□□□ -1.29
GYPB-208ENST00000507009 FTSJ3Q8IY81 847 aaKnown RBP6.97□□□□□ -1.29
GYPB-208ENST00000507009 STK11IPQ8N1F8 1099 aa6.97□□□□□ -1.29
GYPB-208ENST00000507009 MICALL1Q8N3F8 863 aa6.97□□□□□ -1.29
GYPB-208ENST00000507009 SHCBP1Q8NEM2 672 aa6.97□□□□□ -1.29
GYPB-208ENST00000507009 SSH3Q8TE77 659 aa6.97□□□□□ -1.29
GYPB-208ENST00000507009 TIFAQ96CG3 184 aa6.97□□□□□ -1.29
GYPB-208ENST00000507009 GAS2L1Q99501 681 aaPredicted RBP6.97□□□□□ -1.29
GYPB-208ENST00000507009 PRDM12Q9H4Q4 367 aa6.97□□□□□ -1.29
GYPB-208ENST00000507009 ARMT1Q9H993 441 aa6.97□□□□□ -1.29
GYPB-208ENST00000507009 IL1RAPL2Q9NP60 686 aa6.97□□□□□ -1.29
GYPB-208ENST00000507009 STARD7Q9NQZ5 370 aa6.97□□□□□ -1.29
GYPB-208ENST00000507009 FBXO28Q9NVF7 368 aa6.97□□□□□ -1.29
GYPB-208ENST00000507009 ZHX1Q9UKY1 873 aaPredicted RBP6.97□□□□□ -1.29
GYPB-208ENST00000507009 PHF24Q9UPV7 400 aa6.97□□□□□ -1.29
GYPB-208ENST00000507009 VPS9D1Q9Y2B5 631 aa6.97□□□□□ -1.29
GYPB-208ENST00000507009 EXOC6BQ9Y2D4 811 aa6.97□□□□□ -1.29
GYPB-208ENST00000507009 PRUNE2Q8WUY3 3088 aa6.97□□□□□ -1.29
GYPB-208ENST00000507009 BAZ2AQ9UIF9 1905 aaKnown RBP6.96□□□□□ -1.3
GYPB-208ENST00000507009 CYP2D7A0A087X1C5 515 aa6.96□□□□□ -1.3
GYPB-208ENST00000507009 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.96□□□□□ -1.3
GYPB-208ENST00000507009 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.96□□□□□ -1.3
GYPB-208ENST00000507009 DCDC2CA8MYV0 355 aa6.96□□□□□ -1.3
GYPB-208ENST00000507009 GOLIM4O00461 696 aa6.96□□□□□ -1.3
GYPB-208ENST00000507009 PDE6AP16499 860 aa6.96□□□□□ -1.3
GYPB-208ENST00000507009 MFSD10Q14728 455 aa6.96□□□□□ -1.3
GYPB-208ENST00000507009 SNX17Q15036 470 aa6.96□□□□□ -1.3
GYPB-208ENST00000507009 SLFNL1Q499Z3 407 aa6.96□□□□□ -1.3
GYPB-208ENST00000507009 ZKSCAN2Q63HK3 967 aa6.96□□□□□ -1.3
GYPB-208ENST00000507009 TMEM179Q6ZVK1 233 aa6.96□□□□□ -1.3
GYPB-208ENST00000507009 CERS3Q8IU89 383 aa6.96□□□□□ -1.3
GYPB-208ENST00000507009 LCORLQ8N3X6 602 aa6.96□□□□□ -1.3
GYPB-208ENST00000507009 MB21D1Q8N884 522 aa6.96□□□□□ -1.3
GYPB-208ENST00000507009 IL27Q8NEV9 243 aa6.96□□□□□ -1.3
GYPB-208ENST00000507009 ZNF512BQ96KM6 892 aaPredicted RBP6.96□□□□□ -1.3
GYPB-208ENST00000507009 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.96□□□□□ -1.3
GYPB-208ENST00000507009 RIOK1Q9BRS2 568 aaKnown RBP6.96□□□□□ -1.3
GYPB-208ENST00000507009 TINF2Q9BSI4 451 aa6.96□□□□□ -1.3
GYPB-208ENST00000507009 PPP1R12CQ9BZL4 782 aa6.96□□□□□ -1.3
GYPB-208ENST00000507009 ZNF576Q9H609 170 aa6.96□□□□□ -1.3
GYPB-208ENST00000507009 SH2D4AQ9H788 454 aa6.96□□□□□ -1.3
GYPB-208ENST00000507009 CNPY2Q9Y2B0 182 aa6.96□□□□□ -1.3
GYPB-208ENST00000507009 ZNF532Q9HCE3 1301 aa6.96□□□□□ -1.3
GYPB-208ENST00000507009 PARP14Q460N5 1801 aa6.95□□□□□ -1.3
GYPB-208ENST00000507009 MYADML2A6NDP7 307 aa6.95□□□□□ -1.3
GYPB-208ENST00000507009 SMIM22K7EJ46 135 aa6.95□□□□□ -1.3
GYPB-208ENST00000507009 KIAA0355O15063 1070 aa6.95□□□□□ -1.3
GYPB-208ENST00000507009 PRKAB2O43741 272 aa6.95□□□□□ -1.3
GYPB-208ENST00000507009 SLC25A27O95847 323 aa6.95□□□□□ -1.3
GYPB-208ENST00000507009 IGHA2P01877 340 aa6.95□□□□□ -1.3
GYPB-208ENST00000507009 ACRP10323 421 aa6.95□□□□□ -1.3
GYPB-208ENST00000507009 AKR1A1P14550 325 aa6.95□□□□□ -1.3
GYPB-208ENST00000507009 ACLYP53396 1101 aa6.95□□□□□ -1.3
GYPB-208ENST00000507009 GABPAQ06546 454 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms