RNA–Protein interactions for RNA: ENST00000506831.1

CCHCR1-220, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-220ENST00000506831 TEX13BQ9BXU2 312 aa13.53□□□□□ -0.24
CCHCR1-220ENST00000506831 SYNPO2Q9UMS6 1093 aa13.53□□□□□ -0.24
CCHCR1-220ENST00000506831 CNPY2Q9Y2B0 182 aa13.53□□□□□ -0.24
CCHCR1-220ENST00000506831 VCANP13611 3396 aa13.52□□□□□ -0.24
CCHCR1-220ENST00000506831 TMEM265A0A087WTH1 108 aa13.52□□□□□ -0.25
CCHCR1-220ENST00000506831 KIAA0355O15063 1070 aa13.52□□□□□ -0.25
CCHCR1-220ENST00000506831 ADAMTS4O75173 837 aa13.52□□□□□ -0.25
CCHCR1-220ENST00000506831 CHGBP05060 677 aa13.52□□□□□ -0.25
CCHCR1-220ENST00000506831 CLTBP09497 229 aa13.52□□□□□ -0.25
CCHCR1-220ENST00000506831 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.52□□□□□ -0.25
CCHCR1-220ENST00000506831 SH3RF1Q7Z6J0 888 aa13.52□□□□□ -0.25
CCHCR1-220ENST00000506831 ZNF467Q7Z7K2 595 aaPredicted RBP13.52□□□□□ -0.25
CCHCR1-220ENST00000506831 SMC5Q8IY18 1101 aa13.52□□□□□ -0.25
CCHCR1-220ENST00000506831 PRPF38AQ8NAV1 312 aaKnown RBP13.52□□□□□ -0.25
CCHCR1-220ENST00000506831 SLF1Q9BQI6 1058 aa13.52□□□□□ -0.25
CCHCR1-220ENST00000506831 SEMA6BQ9H3T3 888 aa13.52□□□□□ -0.25
CCHCR1-220ENST00000506831 SYNGAP1Q96PV0 1343 aa13.52□□□□□ -0.25
CCHCR1-220ENST00000506831 DNAJC25-GNG10A0A024R161 153 aa13.51□□□□□ -0.25
CCHCR1-220ENST00000506831 MOXD2PA6NHM9 499 aa13.51□□□□□ -0.25
CCHCR1-220ENST00000506831 F5H6K3 240 aa13.51□□□□□ -0.25
CCHCR1-220ENST00000506831 PGK1P00558 417 aa13.51□□□□□ -0.25
CCHCR1-220ENST00000506831 RASA1P20936 1047 aa13.51□□□□□ -0.25
CCHCR1-220ENST00000506831 KLRC3Q07444 240 aa13.51□□□□□ -0.25
CCHCR1-220ENST00000506831 ANKRD33Q7Z3H0 272 aa13.51□□□□□ -0.25
CCHCR1-220ENST00000506831 NUP133Q8WUM0 1156 aa13.51□□□□□ -0.25
CCHCR1-220ENST00000506831 MKL1Q969V6 931 aa13.51□□□□□ -0.25
CCHCR1-220ENST00000506831 FAM161BQ96MY7 647 aa13.51□□□□□ -0.25
CCHCR1-220ENST00000506831 CDX2Q99626 313 aaPredicted RBP13.51□□□□□ -0.25
CCHCR1-220ENST00000506831 BCL11AQ9H165 835 aa13.51□□□□□ -0.25
CCHCR1-220ENST00000506831 MKNK2Q9HBH9 465 aa13.51□□□□□ -0.25
CCHCR1-220ENST00000506831 ZNF287Q9HBT7 754 aa13.51□□□□□ -0.25
CCHCR1-220ENST00000506831 ECHDC1Q9NTX5 307 aa13.51□□□□□ -0.25
CCHCR1-220ENST00000506831 FAM184BQ9ULE4 1060 aa13.51□□□□□ -0.25
CCHCR1-220ENST00000506831 GTF3C3Q9Y5Q9 886 aa13.51□□□□□ -0.25
CCHCR1-220ENST00000506831 A0A1W2PQ45 241 aaPredicted RBP13.5□□□□□ -0.25
CCHCR1-220ENST00000506831 A0A1W2PQY0 241 aa13.5□□□□□ -0.25
CCHCR1-220ENST00000506831 GSG1L2A8MUP6 293 aa13.5□□□□□ -0.25
CCHCR1-220ENST00000506831 RAD21O60216 631 aa13.5□□□□□ -0.25
CCHCR1-220ENST00000506831 ZFYP08048 801 aaPredicted RBP13.5□□□□□ -0.25
CCHCR1-220ENST00000506831 TAL1P17542 331 aaPredicted RBP13.5□□□□□ -0.25
CCHCR1-220ENST00000506831 GNAT2P19087 354 aa13.5□□□□□ -0.25
CCHCR1-220ENST00000506831 SNRNP48Q6IEG0 339 aaKnown RBP13.5□□□□□ -0.25
CCHCR1-220ENST00000506831 KBTBD3Q8NAB2 608 aa13.5□□□□□ -0.25
CCHCR1-220ENST00000506831 KLHDC9Q8NEP7 349 aa13.5□□□□□ -0.25
CCHCR1-220ENST00000506831 APPBP2Q92624 585 aa13.5□□□□□ -0.25
CCHCR1-220ENST00000506831 DDX11Q96FC9 970 aa13.5□□□□□ -0.25
CCHCR1-220ENST00000506831 COL25A1Q9BXS0 654 aaPredicted RBP13.5□□□□□ -0.25
CCHCR1-220ENST00000506831 ELP1O95163 1332 aa13.49□□□□□ -0.25
CCHCR1-220ENST00000506831 IGKV6D-41A0A0C4DH26 115 aa13.49□□□□□ -0.25
CCHCR1-220ENST00000506831 DCDC2CA8MYV0 355 aa13.49□□□□□ -0.25
CCHCR1-220ENST00000506831 SMARCA5O60264 1052 aaPredicted RBP13.49□□□□□ -0.25
CCHCR1-220ENST00000506831 ZBED4O75132 1171 aa13.49□□□□□ -0.25
CCHCR1-220ENST00000506831 DUSP11O75319 330 aaKnown RBP13.49□□□□□ -0.25
CCHCR1-220ENST00000506831 SNAI1O95863 264 aaPredicted RBP13.49□□□□□ -0.25
CCHCR1-220ENST00000506831 NDUFB10O96000 172 aa13.49□□□□□ -0.25
CCHCR1-220ENST00000506831 FDX1P10109 184 aa13.49□□□□□ -0.25
CCHCR1-220ENST00000506831 RAG1P15918 1043 aa13.49□□□□□ -0.25
CCHCR1-220ENST00000506831 ITGB8P26012 769 aa13.49□□□□□ -0.25
CCHCR1-220ENST00000506831 CST5P28325 142 aaPredicted RBP13.49□□□□□ -0.25
CCHCR1-220ENST00000506831 ACLYP53396 1101 aa13.49□□□□□ -0.25
CCHCR1-220ENST00000506831 OAZ1P54368 228 aa13.49□□□□□ -0.25
CCHCR1-220ENST00000506831 CCSAPQ6IQ19 270 aaPredicted RBP13.49□□□□□ -0.25
CCHCR1-220ENST00000506831 CENPQQ7L2Z9 268 aaPredicted RBP13.49□□□□□ -0.25
CCHCR1-220ENST00000506831 STARD7Q9NQZ5 370 aa13.49□□□□□ -0.25
CCHCR1-220ENST00000506831 FBXO40Q9UH90 709 aa13.49□□□□□ -0.25
CCHCR1-220ENST00000506831 FEM1BQ9UK73 627 aa13.49□□□□□ -0.25
CCHCR1-220ENST00000506831 RIPK3Q9Y572 518 aa13.49□□□□□ -0.25
CCHCR1-220ENST00000506831 MROH7Q68CQ1 1323 aa13.48□□□□□ -0.25
CCHCR1-220ENST00000506831 SYNRGQ9UMZ2 1314 aa13.48□□□□□ -0.25
CCHCR1-220ENST00000506831 EYSQ5T1H1 3165 aa13.48□□□□□ -0.25
CCHCR1-220ENST00000506831 MINDY4BA8MYZ0 360 aa13.48□□□□□ -0.25
CCHCR1-220ENST00000506831 RNF113AO15541 343 aaKnown RBP13.48□□□□□ -0.25
CCHCR1-220ENST00000506831 FPGSQ05932 587 aa13.48□□□□□ -0.25
CCHCR1-220ENST00000506831 FAAP100Q0VG06 881 aa13.48□□□□□ -0.25
CCHCR1-220ENST00000506831 LRRFIP1Q32MZ4 808 aaKnown RBP13.48□□□□□ -0.25
CCHCR1-220ENST00000506831 ANKRD45Q5TZF3 282 aa13.48□□□□□ -0.25
CCHCR1-220ENST00000506831 ZNF444Q8N0Y2 327 aaPredicted RBP13.48□□□□□ -0.25
CCHCR1-220ENST00000506831 PCSK9Q8NBP7 692 aaKnown RBP13.48□□□□□ -0.25
CCHCR1-220ENST00000506831 CHST13Q8NET6 341 aa13.48□□□□□ -0.25
CCHCR1-220ENST00000506831 OSBP2Q969R2 916 aa13.48□□□□□ -0.25
CCHCR1-220ENST00000506831 GPATCH3Q96I76 525 aa13.48□□□□□ -0.25
CCHCR1-220ENST00000506831 RNPC3Q96LT9 517 aaKnown RBP13.48□□□□□ -0.25
CCHCR1-220ENST00000506831 NUP88Q99567 741 aaPredicted RBP13.48□□□□□ -0.25
CCHCR1-220ENST00000506831 TTYH1Q9H313 450 aaPredicted RBP13.48□□□□□ -0.25
CCHCR1-220ENST00000506831 ABHD16BQ9H3Z7 469 aa13.48□□□□□ -0.25
CCHCR1-220ENST00000506831 SLC38A10Q9HBR0 1119 aa13.48□□□□□ -0.25
CCHCR1-220ENST00000506831 TMEM39AQ9NV64 488 aa13.48□□□□□ -0.25
CCHCR1-220ENST00000506831 CLIP2Q9UDT6 1046 aa13.48□□□□□ -0.25
CCHCR1-220ENST00000506831 MYH4Q9Y623 1939 aa13.48□□□□□ -0.25
CCHCR1-220ENST00000506831 TTC28Q96AY4 2481 aa13.47□□□□□ -0.25
CCHCR1-220ENST00000506831 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.47□□□□□ -0.25
CCHCR1-220ENST00000506831 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.47□□□□□ -0.25
CCHCR1-220ENST00000506831 GPAA1O43292 621 aa13.47□□□□□ -0.25
CCHCR1-220ENST00000506831 PQBP1O60828 265 aaKnown RBP13.47□□□□□ -0.25
CCHCR1-220ENST00000506831 NUCB1Q02818 461 aa13.47□□□□□ -0.25
CCHCR1-220ENST00000506831 ACVR2BQ13705 512 aa13.47□□□□□ -0.25
CCHCR1-220ENST00000506831 KCNA10Q16322 511 aa13.47□□□□□ -0.25
CCHCR1-220ENST00000506831 GMCL1P1Q8NEA9 526 aa13.47□□□□□ -0.25
CCHCR1-220ENST00000506831 MAFAQ8NHW3 353 aaPredicted RBP13.47□□□□□ -0.25
CCHCR1-220ENST00000506831 GLT1D1Q96MS3 346 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms