RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 MAP3K21Q5TCX8 1036 aa18.33■□□□□ 0.52
MED28-204ENST00000506409 DPP9Q86TI2 863 aa18.33■□□□□ 0.52
MED28-204ENST00000506409 ABRAQ8N0Z2 381 aa18.33■□□□□ 0.52
MED28-204ENST00000506409 TEX13BQ9BXU2 312 aa18.33■□□□□ 0.52
MED28-204ENST00000506409 MTMR7Q9Y216 660 aa18.33■□□□□ 0.52
MED28-204ENST00000506409 ZNF236Q9UL36 1845 aa18.33■□□□□ 0.52
MED28-204ENST00000506409 TOP1P11387 765 aaKnown RBP18.32■□□□□ 0.52
MED28-204ENST00000506409 FCER1AP12319 257 aa18.32■□□□□ 0.52
MED28-204ENST00000506409 NT5C2P49902 561 aa18.32■□□□□ 0.52
MED28-204ENST00000506409 IKQ13123 557 aaPredicted RBP18.32■□□□□ 0.52
MED28-204ENST00000506409 SNRNP48Q6IEG0 339 aaKnown RBP18.32■□□□□ 0.52
MED28-204ENST00000506409 NPLOC4Q8TAT6 608 aa18.32■□□□□ 0.52
MED28-204ENST00000506409 SLC38A10Q9HBR0 1119 aa18.32■□□□□ 0.52
MED28-204ENST00000506409 SLC5A4Q9NY91 659 aa18.32■□□□□ 0.52
MED28-204ENST00000506409 SGSM2O43147 1006 aa18.31■□□□□ 0.52
MED28-204ENST00000506409 TFRCP02786 760 aaKnown RBP18.31■□□□□ 0.52
MED28-204ENST00000506409 CACNB2Q08289 660 aaPredicted RBP18.31■□□□□ 0.52
MED28-204ENST00000506409 MFSD14CQ5VZR4 134 aa18.31■□□□□ 0.52
MED28-204ENST00000506409 RCSD1Q6JBY9 416 aa18.31■□□□□ 0.52
MED28-204ENST00000506409 KCTD1Q719H9 257 aa18.31■□□□□ 0.52
MED28-204ENST00000506409 RASGRP2Q7LDG7 609 aa18.31■□□□□ 0.52
MED28-204ENST00000506409 FAM160B2Q86V87 743 aa18.31■□□□□ 0.52
MED28-204ENST00000506409 CPXCR1Q8N123 301 aa18.31■□□□□ 0.52
MED28-204ENST00000506409 CHURC1Q8WUH1 139 aa18.31■□□□□ 0.52
MED28-204ENST00000506409 CCDC136Q96JN2 1154 aa18.31■□□□□ 0.52
MED28-204ENST00000506409 TTC14Q96N46 770 aa18.31■□□□□ 0.52
MED28-204ENST00000506409 MMP19Q99542 508 aa18.31■□□□□ 0.52
MED28-204ENST00000506409 TMEM47Q9BQJ4 181 aa18.31■□□□□ 0.52
MED28-204ENST00000506409 FLRT1Q9NZU1 646 aa18.31■□□□□ 0.52
MED28-204ENST00000506409 B4E1Z4 1266 aa18.3■□□□□ 0.52
MED28-204ENST00000506409 ATP2A1O14983 1001 aa18.3■□□□□ 0.52
MED28-204ENST00000506409 COBLO75128 1261 aa18.3■□□□□ 0.52
MED28-204ENST00000506409 KDM4AO75164 1064 aa18.3■□□□□ 0.52
MED28-204ENST00000506409 NEFLP07196 543 aa18.3■□□□□ 0.52
MED28-204ENST00000506409 FDX1P10109 184 aa18.3■□□□□ 0.52
MED28-204ENST00000506409 CAPN2P17655 700 aa18.3■□□□□ 0.52
MED28-204ENST00000506409 SLC4A3P48751 1232 aa18.3■□□□□ 0.52
MED28-204ENST00000506409 KCTD2Q14681 263 aa18.3■□□□□ 0.52
MED28-204ENST00000506409 CCDC96Q2M329 555 aa18.3■□□□□ 0.52
MED28-204ENST00000506409 SKAP1Q86WV1 359 aa18.3■□□□□ 0.52
MED28-204ENST00000506409 IQCA1Q86XH1 822 aa18.3■□□□□ 0.52
MED28-204ENST00000506409 DCAF4Q8WV16 495 aa18.3■□□□□ 0.52
MED28-204ENST00000506409 ZKSCAN3Q9BRR0 538 aa18.3■□□□□ 0.52
MED28-204ENST00000506409 CRISPLD2Q9H0B8 497 aa18.3■□□□□ 0.52
MED28-204ENST00000506409 RAVER2Q9HCJ3 691 aaKnown RBP18.3■□□□□ 0.52
MED28-204ENST00000506409 PLA2G6O60733 806 aa18.29■□□□□ 0.52
MED28-204ENST00000506409 OAZ1P54368 228 aa18.29■□□□□ 0.52
MED28-204ENST00000506409 PTH1RQ03431 593 aa18.29■□□□□ 0.52
MED28-204ENST00000506409 KRT23Q9C075 422 aa18.29■□□□□ 0.52
MED28-204ENST00000506409 CNNM2Q9H8M5 875 aa18.29■□□□□ 0.52
MED28-204ENST00000506409 RIPK3Q9Y572 518 aa18.29■□□□□ 0.52
MED28-204ENST00000506409 FARP2O94887 1054 aaPredicted RBP18.28■□□□□ 0.52
MED28-204ENST00000506409 CCND3P30281 292 aaPredicted RBP18.28■□□□□ 0.52
MED28-204ENST00000506409 CYP2C19P33261 490 aa18.28■□□□□ 0.52
MED28-204ENST00000506409 CCDC178Q5BJE1 867 aa18.28■□□□□ 0.52
MED28-204ENST00000506409 OLFML2BQ68BL8 750 aa18.28■□□□□ 0.52
MED28-204ENST00000506409 U3KPZ7 1027 aaPredicted RBP18.28■□□□□ 0.52
MED28-204ENST00000506409 PGK2P07205 417 aa18.27■□□□□ 0.52
MED28-204ENST00000506409 BMP2KLQ5H9B9 411 aa18.27■□□□□ 0.52
MED28-204ENST00000506409 UBE2Q1Q7Z7E8 422 aa18.27■□□□□ 0.52
MED28-204ENST00000506409 DGKHQ86XP1 1220 aa18.27■□□□□ 0.52
MED28-204ENST00000506409 MAML3Q96JK9 1138 aa18.27■□□□□ 0.52
MED28-204ENST00000506409 ZSWIM5Q9P217 1185 aa18.27■□□□□ 0.52
MED28-204ENST00000506409 PRR12Q9ULL5 1215 aa18.27■□□□□ 0.52
MED28-204ENST00000506409 FRMPD2Q68DX3 1309 aaPredicted RBP18.26■□□□□ 0.51
MED28-204ENST00000506409 IGHA2P01877 340 aa18.26■□□□□ 0.51
MED28-204ENST00000506409 CYP21A2P08686 494 aa18.26■□□□□ 0.51
MED28-204ENST00000506409 PDHBP11177 359 aa18.26■□□□□ 0.51
MED28-204ENST00000506409 TRDNQ13061 729 aa18.26■□□□□ 0.51
MED28-204ENST00000506409 ZSCAN10Q96SZ4 725 aaPredicted RBP18.26■□□□□ 0.51
MED28-204ENST00000506409 UBAC1Q9BSL1 405 aa18.26■□□□□ 0.51
MED28-204ENST00000506409 SLC16A2P36021 539 aa18.25■□□□□ 0.51
MED28-204ENST00000506409 TTBK2Q6IQ55 1244 aa18.25■□□□□ 0.51
MED28-204ENST00000506409 KIAA1211Q6ZU35 1233 aa18.25■□□□□ 0.51
MED28-204ENST00000506409 CHST13Q8NET6 341 aa18.25■□□□□ 0.51
MED28-204ENST00000506409 DDX11Q96FC9 970 aa18.25■□□□□ 0.51
MED28-204ENST00000506409 KAT14Q9H8E8 782 aa18.25■□□□□ 0.51
MED28-204ENST00000506409 GPCPD1Q9NPB8 672 aa18.25■□□□□ 0.51
MED28-204ENST00000506409 HOMER2Q9NSB8 354 aa18.25■□□□□ 0.51
MED28-204ENST00000506409 FBXO40Q9UH90 709 aa18.25■□□□□ 0.51
MED28-204ENST00000506409 DIS3Q9Y2L1 958 aaKnown RBP18.25■□□□□ 0.51
MED28-204ENST00000506409 ZNFX1Q9P2E3 1918 aaKnown RBP18.25■□□□□ 0.51
MED28-204ENST00000506409 ZNF536O15090 1300 aa18.24■□□□□ 0.51
MED28-204ENST00000506409 TNKSO95271 1327 aa18.24■□□□□ 0.51
MED28-204ENST00000506409 CYBAP13498 195 aa18.24■□□□□ 0.51
MED28-204ENST00000506409 CNGA1P29973 690 aa18.24■□□□□ 0.51
MED28-204ENST00000506409 SNAP25P60880 206 aa18.24■□□□□ 0.51
MED28-204ENST00000506409 ZNF543Q08ER8 600 aa18.24■□□□□ 0.51
MED28-204ENST00000506409 ZNF792Q3KQV3 632 aa18.24■□□□□ 0.51
MED28-204ENST00000506409 SYDE2Q5VT97 1194 aa18.24■□□□□ 0.51
MED28-204ENST00000506409 PRPF38BQ5VTL8 546 aaKnown RBP18.24■□□□□ 0.51
MED28-204ENST00000506409 CCDC174Q6PII3 467 aa18.24■□□□□ 0.51
MED28-204ENST00000506409 BTNL9Q6UXG8 535 aa18.24■□□□□ 0.51
MED28-204ENST00000506409 ANKRD35Q8N283 1001 aa18.24■□□□□ 0.51
MED28-204ENST00000506409 ENAHQ8N8S7 591 aaPredicted RBP18.24■□□□□ 0.51
MED28-204ENST00000506409 ANKLE1Q8NAG6 615 aa18.24■□□□□ 0.51
MED28-204ENST00000506409 PNMA1Q8ND90 353 aa18.24■□□□□ 0.51
MED28-204ENST00000506409 MAP4K1Q92918 833 aa18.24■□□□□ 0.51
MED28-204ENST00000506409 AGBL1Q96MI9 1066 aa18.24■□□□□ 0.51
MED28-204ENST00000506409 ESYT1Q9BSJ8 1104 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms