RNA–Protein interactions for RNA: ENST00000505982.1

CHD1-204, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-204ENST00000505982 CNNM2Q9H8M5 875 aa8.64□□□□□ -1.03
CHD1-204ENST00000505982 C19orf73Q9NVV2 129 aa8.64□□□□□ -1.03
CHD1-204ENST00000505982 UPK3BL1B0FP48 263 aa8.63□□□□□ -1.03
CHD1-204ENST00000505982 UPK3BL2E5RIL1 263 aa8.63□□□□□ -1.03
CHD1-204ENST00000505982 ACRP10323 421 aa8.63□□□□□ -1.03
CHD1-204ENST00000505982 CDCP2Q5VXM1 449 aa8.63□□□□□ -1.03
CHD1-204ENST00000505982 INTS3Q68E01 1043 aaKnown RBP8.63□□□□□ -1.03
CHD1-204ENST00000505982 HID1Q8IV36 788 aa8.63□□□□□ -1.03
CHD1-204ENST00000505982 TMEM87BQ96K49 555 aa8.63□□□□□ -1.03
CHD1-204ENST00000505982 DIRC2Q96SL1 478 aa8.63□□□□□ -1.03
CHD1-204ENST00000505982 SLC9A7Q96T83 725 aa8.63□□□□□ -1.03
CHD1-204ENST00000505982 KRTAP4-11Q9BYQ6 195 aa8.63□□□□□ -1.03
CHD1-204ENST00000505982 NSUN3Q9H649 340 aaKnown RBP8.63□□□□□ -1.03
CHD1-204ENST00000505982 PHAXQ9H814 394 aaKnown RBP8.63□□□□□ -1.03
CHD1-204ENST00000505982 TJP2Q9UDY2 1190 aa8.63□□□□□ -1.03
CHD1-204ENST00000505982 SBNO2Q9Y2G9 1366 aa8.62□□□□□ -1.03
CHD1-204ENST00000505982 PRR33A8MZF0 331 aa8.62□□□□□ -1.03
CHD1-204ENST00000505982 H3BS24 57 aa8.62□□□□□ -1.03
CHD1-204ENST00000505982 TNFRSF10CO14798 259 aa8.62□□□□□ -1.03
CHD1-204ENST00000505982 TMEM253P0C7T8 217 aa8.62□□□□□ -1.03
CHD1-204ENST00000505982 MCATQ8IVS2 390 aaKnown RBP8.62□□□□□ -1.03
CHD1-204ENST00000505982 MFSD2AQ8NA29 543 aa8.62□□□□□ -1.03
CHD1-204ENST00000505982 PFDN2Q9UHV9 154 aa8.62□□□□□ -1.03
CHD1-204ENST00000505982 PCDHB10Q9UN67 800 aa8.62□□□□□ -1.03
CHD1-204ENST00000505982 ENPP3O14638 875 aa8.61□□□□□ -1.03
CHD1-204ENST00000505982 KRT1P04264 644 aa8.61□□□□□ -1.03
CHD1-204ENST00000505982 POLR2BP30876 1174 aaKnown RBP8.61□□□□□ -1.03
CHD1-204ENST00000505982 NCAPHQ15003 741 aa8.61□□□□□ -1.03
CHD1-204ENST00000505982 SLC6A19Q695T7 634 aa8.61□□□□□ -1.03
CHD1-204ENST00000505982 EEPD1Q7L9B9 569 aa8.61□□□□□ -1.03
CHD1-204ENST00000505982 LILRB2Q8N423 598 aa8.61□□□□□ -1.03
CHD1-204ENST00000505982 MIPEPQ99797 713 aa8.61□□□□□ -1.03
CHD1-204ENST00000505982 DPH2Q9BQC3 489 aaPredicted RBP8.61□□□□□ -1.03
CHD1-204ENST00000505982 FBRSQ9HAH7 460 aa8.61□□□□□ -1.03
CHD1-204ENST00000505982 LTBP3Q9NS15 1303 aa8.6□□□□□ -1.03
CHD1-204ENST00000505982 CDC45O75419 566 aa8.6□□□□□ -1.03
CHD1-204ENST00000505982 RAC2P15153 192 aa8.6□□□□□ -1.03
CHD1-204ENST00000505982 GBP1P32455 592 aa8.6□□□□□ -1.03
CHD1-204ENST00000505982 GNPTABQ3T906 1256 aa8.6□□□□□ -1.03
CHD1-204ENST00000505982 KIAA1211LQ6NV74 962 aa8.6□□□□□ -1.03
CHD1-204ENST00000505982 THAP5Q7Z6K1 395 aa8.6□□□□□ -1.03
CHD1-204ENST00000505982 MRPL41Q8IXM3 137 aaKnown RBP8.6□□□□□ -1.03
CHD1-204ENST00000505982 ALPK1Q96QP1 1244 aa8.6□□□□□ -1.03
CHD1-204ENST00000505982 FANCLQ9NW38 375 aa8.6□□□□□ -1.03
CHD1-204ENST00000505982 ST14Q9Y5Y6 855 aa8.6□□□□□ -1.03
CHD1-204ENST00000505982 KDM2BQ8NHM5 1336 aa8.59□□□□□ -1.03
CHD1-204ENST00000505982 SLC7A5Q01650 507 aa8.59□□□□□ -1.03
CHD1-204ENST00000505982 SSRP1Q08945 709 aaKnown RBP8.59□□□□□ -1.03
CHD1-204ENST00000505982 MRM1Q6IN84 353 aaKnown RBP8.59□□□□□ -1.03
CHD1-204ENST00000505982 SLFN12Q8IYM2 578 aa8.59□□□□□ -1.03
CHD1-204ENST00000505982 ST13P5Q8NFI4 369 aaPredicted RBP8.59□□□□□ -1.03
CHD1-204ENST00000505982 APPBP2Q92624 585 aa8.59□□□□□ -1.03
CHD1-204ENST00000505982 KIF2CQ99661 725 aa8.59□□□□□ -1.03
CHD1-204ENST00000505982 FAM86C1Q9NVL1 165 aa8.59□□□□□ -1.03
CHD1-204ENST00000505982 RAPGEFL1Q9UHV5 662 aa8.59□□□□□ -1.03
CHD1-204ENST00000505982 CAPN6Q9Y6Q1 641 aa8.59□□□□□ -1.03
CHD1-204ENST00000505982 CNTNAP4Q9C0A0 1308 aa8.58□□□□□ -1.04
CHD1-204ENST00000505982 NPIPB6E9PJ23 425 aa8.58□□□□□ -1.04
CHD1-204ENST00000505982 CAP2P40123 477 aa8.58□□□□□ -1.04
CHD1-204ENST00000505982 SLBPQ14493 270 aaKnown RBP eCLIP8.58□□□□□ -1.04
CHD1-204ENST00000505982 NKG7Q16617 165 aa8.58□□□□□ -1.04
CHD1-204ENST00000505982 SPATC1Q76KD6 591 aa8.58□□□□□ -1.04
CHD1-204ENST00000505982 AMIGO3Q86WK7 504 aa8.58□□□□□ -1.04
CHD1-204ENST00000505982 HOMER1Q86YM7 354 aa8.58□□□□□ -1.04
CHD1-204ENST00000505982 ABHD4Q8TB40 342 aa8.58□□□□□ -1.04
CHD1-204ENST00000505982 XAGE3Q8WTP9 111 aa8.58□□□□□ -1.04
CHD1-204ENST00000505982 UBE2FQ969M7 185 aa8.58□□□□□ -1.04
CHD1-204ENST00000505982 DHRS1Q96LJ7 313 aa8.58□□□□□ -1.04
CHD1-204ENST00000505982 CCDC74BQ96LY2 380 aa8.58□□□□□ -1.04
CHD1-204ENST00000505982 SLC6A18Q96N87 628 aa8.58□□□□□ -1.04
CHD1-204ENST00000505982 SLKQ9H2G2 1235 aaPredicted RBP8.58□□□□□ -1.04
CHD1-204ENST00000505982 EPB41L4BQ9H329 900 aa8.58□□□□□ -1.04
CHD1-204ENST00000505982 KANSL2Q9H9L4 492 aa8.58□□□□□ -1.04
CHD1-204ENST00000505982 CWC22Q9HCG8 908 aaKnown RBP8.58□□□□□ -1.04
CHD1-204ENST00000505982 DCP1AQ9NPI6 582 aaPredicted RBP8.58□□□□□ -1.04
CHD1-204ENST00000505982 ESYT3A0FGR9 886 aa8.57□□□□□ -1.04
CHD1-204ENST00000505982 CYP7A1P22680 504 aa8.57□□□□□ -1.04
CHD1-204ENST00000505982 CCNFP41002 786 aa8.57□□□□□ -1.04
CHD1-204ENST00000505982 BBS9Q3SYG4 887 aa8.57□□□□□ -1.04
CHD1-204ENST00000505982 RNF187Q5TA31 235 aaPredicted RBP8.57□□□□□ -1.04
CHD1-204ENST00000505982 PRAMEF13Q5VWM6 474 aa8.57□□□□□ -1.04
CHD1-204ENST00000505982 TTLL10Q6ZVT0 673 aa8.57□□□□□ -1.04
CHD1-204ENST00000505982 COX4I2Q96KJ9 171 aa8.57□□□□□ -1.04
CHD1-204ENST00000505982 NCANO14594 1321 aa8.56□□□□□ -1.04
CHD1-204ENST00000505982 PRRG2O14669 202 aa8.56□□□□□ -1.04
CHD1-204ENST00000505982 RGS13O14921 159 aa8.56□□□□□ -1.04
CHD1-204ENST00000505982 SUSD5O60279 629 aa8.56□□□□□ -1.04
CHD1-204ENST00000505982 DIAPH1O60610 1272 aaKnown RBP8.56□□□□□ -1.04
CHD1-204ENST00000505982 CBX7O95931 251 aa8.56□□□□□ -1.04
CHD1-204ENST00000505982 KCNA10Q16322 511 aa8.56□□□□□ -1.04
CHD1-204ENST00000505982 C2orf27AQ580R0 203 aa8.56□□□□□ -1.04
CHD1-204ENST00000505982 TDRD10Q5VZ19 366 aaKnown RBP8.56□□□□□ -1.04
CHD1-204ENST00000505982 LETMD1Q6P1Q0 360 aa8.56□□□□□ -1.04
CHD1-204ENST00000505982 ATG14Q6ZNE5 492 aa8.56□□□□□ -1.04
CHD1-204ENST00000505982 ANKRD13AQ8IZ07 590 aa8.56□□□□□ -1.04
CHD1-204ENST00000505982 THAP3Q8WTV1 239 aaPredicted RBP8.56□□□□□ -1.04
CHD1-204ENST00000505982 SLAMF8Q9P0V8 285 aa8.56□□□□□ -1.04
CHD1-204ENST00000505982 ZSWIM5Q9P217 1185 aa8.56□□□□□ -1.04
CHD1-204ENST00000505982 ZMYM5Q9UJ78 669 aa8.56□□□□□ -1.04
CHD1-204ENST00000505982 ZNF214Q9UL59 606 aaPredicted RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms