RNA–Protein interactions for RNA: ENST00000505957.1

CPNE4-206, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-206ENST00000505957 TLE2Q04725 743 aa12.67□□□□□ -0.38
CPNE4-206ENST00000505957 PLS1Q14651 629 aa12.67□□□□□ -0.38
CPNE4-206ENST00000505957 MCMDC2Q4G0Z9 681 aa12.67□□□□□ -0.38
CPNE4-206ENST00000505957 KIAA1755Q5JYT7 1200 aa12.67□□□□□ -0.38
CPNE4-206ENST00000505957 SLC9C2Q5TAH2 1124 aa12.67□□□□□ -0.38
CPNE4-206ENST00000505957 SIAH1Q8IUQ4 282 aa12.67□□□□□ -0.38
CPNE4-206ENST00000505957 SYMPKQ92797 1274 aaKnown RBP12.67□□□□□ -0.38
CPNE4-206ENST00000505957 FERMT2Q96AC1 680 aa12.67□□□□□ -0.38
CPNE4-206ENST00000505957 ATG4CQ96DT6 458 aa12.67□□□□□ -0.38
CPNE4-206ENST00000505957 TM6SF1Q9BZW5 370 aa12.67□□□□□ -0.38
CPNE4-206ENST00000505957 VCPKMTQ9H867 229 aa12.67□□□□□ -0.38
CPNE4-206ENST00000505957 ARHGEF10LQ9HCE6 1279 aa12.67□□□□□ -0.38
CPNE4-206ENST00000505957 DCP1AQ9NPI6 582 aaPredicted RBP12.67□□□□□ -0.38
CPNE4-206ENST00000505957 ADAMTS5Q9UNA0 930 aa12.67□□□□□ -0.38
CPNE4-206ENST00000505957 DIS3Q9Y2L1 958 aaKnown RBP12.67□□□□□ -0.38
CPNE4-206ENST00000505957 ROBO3Q96MS0 1386 aa12.67□□□□□ -0.38
CPNE4-206ENST00000505957 KIAA0355O15063 1070 aa12.66□□□□□ -0.38
CPNE4-206ENST00000505957 WDR46O15213 610 aaKnown RBP12.66□□□□□ -0.38
CPNE4-206ENST00000505957 RNF113AO15541 343 aaKnown RBP12.66□□□□□ -0.38
CPNE4-206ENST00000505957 MYCNP04198 464 aaPredicted RBP12.66□□□□□ -0.38
CPNE4-206ENST00000505957 CLTBP09497 229 aa12.66□□□□□ -0.38
CPNE4-206ENST00000505957 NECTIN1Q15223 517 aa12.66□□□□□ -0.38
CPNE4-206ENST00000505957 TSGA10IPQ3SY00 556 aa12.66□□□□□ -0.38
CPNE4-206ENST00000505957 RNF180Q86T96 592 aa12.66□□□□□ -0.38
CPNE4-206ENST00000505957 MYLIPQ8WY64 445 aa12.66□□□□□ -0.38
CPNE4-206ENST00000505957 CCDC17Q96LX7 622 aa12.66□□□□□ -0.38
CPNE4-206ENST00000505957 XPNPEP3Q9NQH7 507 aa12.66□□□□□ -0.38
CPNE4-206ENST00000505957 DNAH12Q6ZR08 3092 aa12.65□□□□□ -0.38
CPNE4-206ENST00000505957 A0A0G2JMZ2 1700 aa12.65□□□□□ -0.38
CPNE4-206ENST00000505957 TCRBV5S4A2TA0A5A2 114 aa12.65□□□□□ -0.38
CPNE4-206ENST00000505957 FOSL2P15408 326 aa12.65□□□□□ -0.38
CPNE4-206ENST00000505957 ITGB8P26012 769 aa12.65□□□□□ -0.38
CPNE4-206ENST00000505957 COPB2P35606 906 aa12.65□□□□□ -0.38
CPNE4-206ENST00000505957 SLC4A3P48751 1232 aa12.65□□□□□ -0.38
CPNE4-206ENST00000505957 PTH1RQ03431 593 aa12.65□□□□□ -0.38
CPNE4-206ENST00000505957 EVX2Q03828 476 aa12.65□□□□□ -0.38
CPNE4-206ENST00000505957 ICA1Q05084 483 aa12.65□□□□□ -0.38
CPNE4-206ENST00000505957 TMEM132BQ14DG7 1078 aa12.65□□□□□ -0.38
CPNE4-206ENST00000505957 ZSCAN25Q6NSZ9 544 aa12.65□□□□□ -0.38
CPNE4-206ENST00000505957 RIOX2Q8IUF8 465 aa12.65□□□□□ -0.38
CPNE4-206ENST00000505957 SDR42E1Q8WUS8 393 aa12.65□□□□□ -0.38
CPNE4-206ENST00000505957 RNPC3Q96LT9 517 aaKnown RBP12.65□□□□□ -0.38
CPNE4-206ENST00000505957 TOX2Q96NM4 488 aa12.65□□□□□ -0.38
CPNE4-206ENST00000505957 TINF2Q9BSI4 451 aa12.65□□□□□ -0.38
CPNE4-206ENST00000505957 TSEN34Q9BSV6 310 aaKnown RBP12.65□□□□□ -0.38
CPNE4-206ENST00000505957 PRDM6Q9NQX0 595 aa12.65□□□□□ -0.38
CPNE4-206ENST00000505957 CIZ1Q9ULV3 898 aaPredicted RBP12.65□□□□□ -0.38
CPNE4-206ENST00000505957 SNX14Q9Y5W7 946 aa12.65□□□□□ -0.38
CPNE4-206ENST00000505957 ZNF532Q9HCE3 1301 aa12.64□□□□□ -0.39
CPNE4-206ENST00000505957 CD2BP2O95400 341 aaKnown RBP12.64□□□□□ -0.39
CPNE4-206ENST00000505957 ZNF865P0CJ78 1059 aaPredicted RBP12.64□□□□□ -0.39
CPNE4-206ENST00000505957 AKR1B1P15121 316 aa12.64□□□□□ -0.39
CPNE4-206ENST00000505957 RAG1P15918 1043 aa12.64□□□□□ -0.39
CPNE4-206ENST00000505957 DDIT3P35638 169 aa12.64□□□□□ -0.39
CPNE4-206ENST00000505957 KCTD2Q14681 263 aa12.64□□□□□ -0.39
CPNE4-206ENST00000505957 ZNF792Q3KQV3 632 aa12.64□□□□□ -0.39
CPNE4-206ENST00000505957 RNF20Q5VTR2 975 aa12.64□□□□□ -0.39
CPNE4-206ENST00000505957 ANKRD33Q7Z3H0 272 aa12.64□□□□□ -0.39
CPNE4-206ENST00000505957 ZNF589Q86UQ0 364 aaPredicted RBP12.64□□□□□ -0.39
CPNE4-206ENST00000505957 SPICE1Q8N0Z3 855 aa12.64□□□□□ -0.39
CPNE4-206ENST00000505957 LCORLQ8N3X6 602 aa12.64□□□□□ -0.39
CPNE4-206ENST00000505957 MSL3Q8N5Y2 521 aaKnown RBP12.64□□□□□ -0.39
CPNE4-206ENST00000505957 SLC44A5Q8NCS7 719 aa12.64□□□□□ -0.39
CPNE4-206ENST00000505957 MMP19Q99542 508 aa12.64□□□□□ -0.39
CPNE4-206ENST00000505957 DSCC1Q9BVC3 393 aa12.64□□□□□ -0.39
CPNE4-206ENST00000505957 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.64□□□□□ -0.39
CPNE4-206ENST00000505957 ATP8A2Q9NTI2 1148 aa12.64□□□□□ -0.39
CPNE4-206ENST00000505957 RBM8AQ9Y5S9 174 aaKnown RBP12.64□□□□□ -0.39
CPNE4-206ENST00000505957 U3KPZ7 1027 aaPredicted RBP12.64□□□□□ -0.39
CPNE4-206ENST00000505957 MYH7P12883 1935 aa12.64□□□□□ -0.39
CPNE4-206ENST00000505957 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.63□□□□□ -0.39
CPNE4-206ENST00000505957 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.63□□□□□ -0.39
CPNE4-206ENST00000505957 A0A1W2PQ45 241 aaPredicted RBP12.63□□□□□ -0.39
CPNE4-206ENST00000505957 A0A1W2PQY0 241 aa12.63□□□□□ -0.39
CPNE4-206ENST00000505957 PGK1P00558 417 aa12.63□□□□□ -0.39
CPNE4-206ENST00000505957 CYP2D6P10635 497 aa12.63□□□□□ -0.39
CPNE4-206ENST00000505957 AKR1A1P14550 325 aa12.63□□□□□ -0.39
CPNE4-206ENST00000505957 STAT3P40763 770 aa12.63□□□□□ -0.39
CPNE4-206ENST00000505957 EPHB4P54760 987 aa12.63□□□□□ -0.39
CPNE4-206ENST00000505957 FPGSQ05932 587 aa12.63□□□□□ -0.39
CPNE4-206ENST00000505957 UBE3CQ15386 1083 aa12.63□□□□□ -0.39
CPNE4-206ENST00000505957 APPBP2Q92624 585 aa12.63□□□□□ -0.39
CPNE4-206ENST00000505957 DYNLL2Q96FJ2 89 aa12.63□□□□□ -0.39
CPNE4-206ENST00000505957 KANSL2Q9H9L4 492 aa12.63□□□□□ -0.39
CPNE4-206ENST00000505957 TMEM39AQ9NV64 488 aa12.63□□□□□ -0.39
CPNE4-206ENST00000505957 LAMA2P24043 3122 aaKnown RBP12.63□□□□□ -0.39
CPNE4-206ENST00000505957 TTC28Q96AY4 2481 aa12.63□□□□□ -0.39
CPNE4-206ENST00000505957 NAV1Q8NEY1 1877 aa12.62□□□□□ -0.39
CPNE4-206ENST00000505957 MOXD2PA6NHM9 499 aa12.62□□□□□ -0.39
CPNE4-206ENST00000505957 VWA5AO00534 786 aa12.62□□□□□ -0.39
CPNE4-206ENST00000505957 PQBP1O60828 265 aaKnown RBP12.62□□□□□ -0.39
CPNE4-206ENST00000505957 ADAMTS4O75173 837 aa12.62□□□□□ -0.39
CPNE4-206ENST00000505957 PGK2P07205 417 aa12.62□□□□□ -0.39
CPNE4-206ENST00000505957 TAL1P17542 331 aaPredicted RBP12.62□□□□□ -0.39
CPNE4-206ENST00000505957 ADD2P35612 726 aa12.62□□□□□ -0.39
CPNE4-206ENST00000505957 CDK8P49336 464 aa12.62□□□□□ -0.39
CPNE4-206ENST00000505957 FAAP100Q0VG06 881 aa12.62□□□□□ -0.39
CPNE4-206ENST00000505957 KRT32Q14532 448 aa12.62□□□□□ -0.39
CPNE4-206ENST00000505957 C12orf60Q5U649 245 aa12.62□□□□□ -0.39
CPNE4-206ENST00000505957 CREB3L3Q68CJ9 461 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms