RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 BTDP43251 543 aa8.73□□□□□ -1.01
VCAN-206ENST00000505615 WNT7BP56706 349 aa8.73□□□□□ -1.01
VCAN-206ENST00000505615 JAG1P78504 1218 aa8.73□□□□□ -1.01
VCAN-206ENST00000505615 TLE2Q04725 743 aa8.73□□□□□ -1.01
VCAN-206ENST00000505615 SHROOM1Q2M3G4 852 aaPredicted RBP8.73□□□□□ -1.01
VCAN-206ENST00000505615 GPIHBP1Q8IV16 184 aa8.73□□□□□ -1.01
VCAN-206ENST00000505615 ZNF384Q8TF68 577 aa8.73□□□□□ -1.01
VCAN-206ENST00000505615 EDC3Q96F86 508 aaKnown RBP8.73□□□□□ -1.01
VCAN-206ENST00000505615 PAGR1Q9BTK6 254 aa8.73□□□□□ -1.01
VCAN-206ENST00000505615 C11orf16Q9NQ32 467 aa8.73□□□□□ -1.01
VCAN-206ENST00000505615 CXXC1Q9P0U4 656 aaPredicted RBP8.73□□□□□ -1.01
VCAN-206ENST00000505615 MROH7-TTC4A0A0A0MT08 1334 aa8.73□□□□□ -1.01
VCAN-206ENST00000505615 A0A0G2JMZ2 1700 aa8.72□□□□□ -1.01
VCAN-206ENST00000505615 SLC15A5A6NIM6 579 aa8.72□□□□□ -1.01
VCAN-206ENST00000505615 KBTBD13C9JR72 458 aa8.72□□□□□ -1.01
VCAN-206ENST00000505615 KDM4AO75164 1064 aa8.72□□□□□ -1.01
VCAN-206ENST00000505615 PHKA1P46020 1223 aa8.72□□□□□ -1.01
VCAN-206ENST00000505615 RFX5P48382 616 aaPredicted RBP8.72□□□□□ -1.01
VCAN-206ENST00000505615 GRB14Q14449 540 aa8.72□□□□□ -1.01
VCAN-206ENST00000505615 LRRC41Q15345 812 aa8.72□□□□□ -1.01
VCAN-206ENST00000505615 CCDC85BQ15834 202 aaPredicted RBP8.72□□□□□ -1.01
VCAN-206ENST00000505615 ANO1Q5XXA6 986 aa8.72□□□□□ -1.01
VCAN-206ENST00000505615 ALYREFQ86V81 257 aaKnown RBP8.72□□□□□ -1.01
VCAN-206ENST00000505615 ARRDC4Q8NCT1 418 aa8.72□□□□□ -1.01
VCAN-206ENST00000505615 GTF3C2Q8WUA4 911 aaPredicted RBP8.72□□□□□ -1.01
VCAN-206ENST00000505615 PBX4Q9BYU1 374 aa8.72□□□□□ -1.01
VCAN-206ENST00000505615 SRCIN1Q9C0H9 1055 aa8.72□□□□□ -1.01
VCAN-206ENST00000505615 AS3MTQ9HBK9 375 aa8.72□□□□□ -1.01
VCAN-206ENST00000505615 NDUFB9Q9Y6M9 179 aa8.72□□□□□ -1.01
VCAN-206ENST00000505615 FANCIQ9NVI1 1328 aa8.72□□□□□ -1.01
VCAN-206ENST00000505615 SPTBN4Q9H254 2564 aa8.71□□□□□ -1.01
VCAN-206ENST00000505615 GPR75-ASB3A0A0A6YYF3 556 aa8.71□□□□□ -1.02
VCAN-206ENST00000505615 GRXCR1A8MXD5 290 aa8.71□□□□□ -1.02
VCAN-206ENST00000505615 EYA2O00167 538 aa8.71□□□□□ -1.02
VCAN-206ENST00000505615 CLTBP09497 229 aa8.71□□□□□ -1.02
VCAN-206ENST00000505615 ADCYAP1R1P41586 468 aa8.71□□□□□ -1.02
VCAN-206ENST00000505615 FPGSQ05932 587 aa8.71□□□□□ -1.02
VCAN-206ENST00000505615 RASIP1Q5U651 963 aa8.71□□□□□ -1.02
VCAN-206ENST00000505615 ATG9AQ7Z3C6 839 aa8.71□□□□□ -1.02
VCAN-206ENST00000505615 WWC1Q8IX03 1113 aa8.71□□□□□ -1.02
VCAN-206ENST00000505615 IL27Q8NEV9 243 aa8.71□□□□□ -1.02
VCAN-206ENST00000505615 HLA-CQ95604 372 aa8.71□□□□□ -1.02
VCAN-206ENST00000505615 FERMT2Q96AC1 680 aa8.71□□□□□ -1.02
VCAN-206ENST00000505615 KIFC2Q96AC6 838 aa8.71□□□□□ -1.02
VCAN-206ENST00000505615 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.71□□□□□ -1.02
VCAN-206ENST00000505615 DNAJC18Q9H819 358 aa8.71□□□□□ -1.02
VCAN-206ENST00000505615 TMOD4Q9NZQ9 345 aa8.71□□□□□ -1.02
VCAN-206ENST00000505615 DENND2AQ9ULE3 1009 aa8.71□□□□□ -1.02
VCAN-206ENST00000505615 PHF24Q9UPV7 400 aa8.71□□□□□ -1.02
VCAN-206ENST00000505615 RABGAP1Q9Y3P9 1069 aa8.71□□□□□ -1.02
VCAN-206ENST00000505615 TACC3Q9Y6A5 838 aa8.71□□□□□ -1.02
VCAN-206ENST00000505615 IL16Q14005 1332 aa8.71□□□□□ -1.02
VCAN-206ENST00000505615 C19orf81C9J6K1 198 aa8.7□□□□□ -1.02
VCAN-206ENST00000505615 SEPT4O43236 478 aa8.7□□□□□ -1.02
VCAN-206ENST00000505615 HOXA2O43364 376 aa8.7□□□□□ -1.02
VCAN-206ENST00000505615 KCNQ1P51787 676 aa8.7□□□□□ -1.02
VCAN-206ENST00000505615 USP46P62068 366 aa8.7□□□□□ -1.02
VCAN-206ENST00000505615 ATP2B2Q01814 1243 aa8.7□□□□□ -1.02
VCAN-206ENST00000505615 TFF2Q03403 129 aa8.7□□□□□ -1.02
VCAN-206ENST00000505615 CCDC27Q2M243 656 aa8.7□□□□□ -1.02
VCAN-206ENST00000505615 FAM47AQ5JRC9 791 aa8.7□□□□□ -1.02
VCAN-206ENST00000505615 TMEM31Q5JXX7 168 aa8.7□□□□□ -1.02
VCAN-206ENST00000505615 DZIP1Q86YF9 867 aaKnown RBP8.7□□□□□ -1.02
VCAN-206ENST00000505615 CCAR1Q8IX12 1150 aaKnown RBP8.7□□□□□ -1.02
VCAN-206ENST00000505615 PARP14Q460N5 1801 aa8.7□□□□□ -1.02
VCAN-206ENST00000505615 MYO5AQ9Y4I1 1855 aaKnown RBP8.7□□□□□ -1.02
VCAN-206ENST00000505615 CACNA1HO95180 2353 aa8.7□□□□□ -1.02
VCAN-206ENST00000505615 USP17L10C9JJH3 530 aa8.69□□□□□ -1.02
VCAN-206ENST00000505615 GPR37L1O60883 481 aa8.69□□□□□ -1.02
VCAN-206ENST00000505615 GLRX3O76003 335 aaKnown RBP8.69□□□□□ -1.02
VCAN-206ENST00000505615 ASNSP08243 561 aa8.69□□□□□ -1.02
VCAN-206ENST00000505615 RAG1P15918 1043 aa8.69□□□□□ -1.02
VCAN-206ENST00000505615 RASGRF1Q13972 1273 aa8.69□□□□□ -1.02
VCAN-206ENST00000505615 ATP2B3Q16720 1220 aa8.69□□□□□ -1.02
VCAN-206ENST00000505615 TMEM240Q5SV17 173 aa8.69□□□□□ -1.02
VCAN-206ENST00000505615 OLFML2BQ68BL8 750 aa8.69□□□□□ -1.02
VCAN-206ENST00000505615 SLC4A10Q6U841 1118 aa8.69□□□□□ -1.02
VCAN-206ENST00000505615 C16orf59Q7L2K0 433 aa8.69□□□□□ -1.02
VCAN-206ENST00000505615 ZGPATQ8N5A5 531 aaKnown RBP8.69□□□□□ -1.02
VCAN-206ENST00000505615 BTBD7Q9P203 1132 aa8.69□□□□□ -1.02
VCAN-206ENST00000505615 HERC5Q9UII4 1024 aaKnown RBP8.69□□□□□ -1.02
VCAN-206ENST00000505615 MYH1P12882 1939 aa8.69□□□□□ -1.02
VCAN-206ENST00000505615 PDS5AQ29RF7 1337 aaKnown RBP8.69□□□□□ -1.02
VCAN-206ENST00000505615 CFAP54Q96N23 3096 aa8.68□□□□□ -1.02
VCAN-206ENST00000505615 FAM86C2PA6NEL3 165 aa8.68□□□□□ -1.02
VCAN-206ENST00000505615 PQBP1O60828 265 aaKnown RBP8.68□□□□□ -1.02
VCAN-206ENST00000505615 IGFBP4P22692 258 aa8.68□□□□□ -1.02
VCAN-206ENST00000505615 ADORA1P30542 326 aa8.68□□□□□ -1.02
VCAN-206ENST00000505615 CCNA1P78396 465 aa8.68□□□□□ -1.02
VCAN-206ENST00000505615 MECOMQ03112 1051 aa8.68□□□□□ -1.02
VCAN-206ENST00000505615 EXOSC9Q06265 439 aaKnown RBP8.68□□□□□ -1.02
VCAN-206ENST00000505615 FAAP100Q0VG06 881 aa8.68□□□□□ -1.02
VCAN-206ENST00000505615 WDR78Q5VTH9 848 aa8.68□□□□□ -1.02
VCAN-206ENST00000505615 LBX2Q6XYB7 198 aa8.68□□□□□ -1.02
VCAN-206ENST00000505615 METTL16Q86W50 562 aaKnown RBP8.68□□□□□ -1.02
VCAN-206ENST00000505615 C12orf42Q96LP6 360 aa8.68□□□□□ -1.02
VCAN-206ENST00000505615 CWC22Q9HCG8 908 aaKnown RBP8.68□□□□□ -1.02
VCAN-206ENST00000505615 GNL3LQ9NVN8 582 aaKnown RBP8.68□□□□□ -1.02
VCAN-206ENST00000505615 TBX21Q9UL17 535 aa8.68□□□□□ -1.02
VCAN-206ENST00000505615 ZBTB21Q9ULJ3 1066 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms