RNA–Protein interactions for RNA: ENST00000505081.5

DDX41-205, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,949 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-205ENST00000505081 USP17L4A6NCW7 530 aa18.05■□□□□ 0.48
DDX41-205ENST00000505081 ZBTB22O15209 634 aa18.05■□□□□ 0.48
DDX41-205ENST00000505081 PARP1P09874 1014 aaKnown RBP18.05■□□□□ 0.48
DDX41-205ENST00000505081 MCM6Q14566 821 aa18.05■□□□□ 0.48
DDX41-205ENST00000505081 USP17L1Q7RTZ2 530 aa18.05■□□□□ 0.48
DDX41-205ENST00000505081 CPVLQ9H3G5 476 aa18.05■□□□□ 0.48
DDX41-205ENST00000505081 TTF2Q9UNY4 1162 aaKnown RBP18.05■□□□□ 0.48
DDX41-205ENST00000505081 LAMB2P55268 1798 aa18.05■□□□□ 0.48
DDX41-205ENST00000505081 TTC26A0AVF1 554 aa18.05■□□□□ 0.48
DDX41-205ENST00000505081 HIBADHP31937 336 aaKnown RBP18.05■□□□□ 0.48
DDX41-205ENST00000505081 TRAPPC10P48553 1259 aa18.05■□□□□ 0.48
DDX41-205ENST00000505081 NCAPH2Q6IBW4 605 aa18.05■□□□□ 0.48
DDX41-205ENST00000505081 CYP26C1Q6V0L0 522 aa18.05■□□□□ 0.48
DDX41-205ENST00000505081 CCDC51Q96ER9 411 aa18.05■□□□□ 0.48
DDX41-205ENST00000505081 KAT14Q9H8E8 782 aa18.05■□□□□ 0.48
DDX41-205ENST00000505081 SCN7AQ01118 1682 aa18.05■□□□□ 0.48
DDX41-205ENST00000505081 CCDC66A2RUB6 948 aa18.05■□□□□ 0.48
DDX41-205ENST00000505081 PCP11498 1178 aaKnown RBP18.05■□□□□ 0.48
DDX41-205ENST00000505081 INF2Q27J81 1249 aa18.05■□□□□ 0.48
DDX41-205ENST00000505081 GUCA1BQ9UMX6 200 aa18.05■□□□□ 0.48
DDX41-205ENST00000505081 CCDC151A5D8V7 595 aa18.04■□□□□ 0.48
DDX41-205ENST00000505081 HNRNPH2P55795 449 aaKnown RBP18.04■□□□□ 0.48
DDX41-205ENST00000505081 CEP112Q8N8E3 955 aa18.04■□□□□ 0.48
DDX41-205ENST00000505081 NOA1Q8NC60 698 aaKnown RBP18.04■□□□□ 0.48
DDX41-205ENST00000505081 SLC44A5Q8NCS7 719 aa18.04■□□□□ 0.48
DDX41-205ENST00000505081 PNMA1Q8ND90 353 aa18.04■□□□□ 0.48
DDX41-205ENST00000505081 TRERF1Q96PN7 1200 aa18.04■□□□□ 0.48
DDX41-205ENST00000505081 NAPGQ99747 312 aaPredicted RBP18.04■□□□□ 0.48
DDX41-205ENST00000505081 DISC1Q9NRI5 854 aa18.04■□□□□ 0.48
DDX41-205ENST00000505081 COL16A1Q07092 1604 aaPredicted RBP18.04■□□□□ 0.48
DDX41-205ENST00000505081 ENC1O14682 589 aa18.04■□□□□ 0.48
DDX41-205ENST00000505081 RPS8P62241 208 aaKnown RBP18.04■□□□□ 0.48
DDX41-205ENST00000505081 ABCB6Q9NP58 842 aa18.04■□□□□ 0.48
DDX41-205ENST00000505081 SPATA31A1Q5TZJ5 1347 aa18.04■□□□□ 0.48
DDX41-205ENST00000505081 GOLGA8HP0CJ92 632 aa18.03■□□□□ 0.48
DDX41-205ENST00000505081 LONP1P36776 959 aaKnown RBP18.03■□□□□ 0.48
DDX41-205ENST00000505081 BEND6Q5SZJ8 279 aaPredicted RBP18.03■□□□□ 0.48
DDX41-205ENST00000505081 ADSSL1Q8N142 457 aa18.03■□□□□ 0.48
DDX41-205ENST00000505081 ATP8A2Q9NTI2 1148 aa18.03■□□□□ 0.48
DDX41-205ENST00000505081 RNF216Q9NWF9 866 aaPredicted RBP18.03■□□□□ 0.48
DDX41-205ENST00000505081 HDAC6Q9UBN7 1215 aa18.03■□□□□ 0.48
DDX41-205ENST00000505081 SRP68Q9UHB9 627 aaKnown RBP18.03■□□□□ 0.48
DDX41-205ENST00000505081 PCDHA4Q9UN74 947 aa18.03■□□□□ 0.48
DDX41-205ENST00000505081 VSNL1P62760 191 aa18.03■□□□□ 0.48
DDX41-205ENST00000505081 SPAG1Q07617 926 aa18.03■□□□□ 0.48
DDX41-205ENST00000505081 ANKRD20A12PQ8NF67 263 aa18.03■□□□□ 0.48
DDX41-205ENST00000505081 PDE11AQ9HCR9 933 aa18.03■□□□□ 0.48
DDX41-205ENST00000505081 CYTH3O43739 400 aa18.02■□□□□ 0.48
DDX41-205ENST00000505081 BRD3Q15059 726 aa18.02■□□□□ 0.48
DDX41-205ENST00000505081 JAKMIP3Q5VZ66 844 aa18.02■□□□□ 0.48
DDX41-205ENST00000505081 HEATR3Q7Z4Q2 680 aa18.02■□□□□ 0.48
DDX41-205ENST00000505081 RMND1Q9NWS8 449 aa18.02■□□□□ 0.48
DDX41-205ENST00000505081 ARPP21Q9UBL0 812 aaPredicted RBP18.02■□□□□ 0.48
DDX41-205ENST00000505081 PCDHA6Q9UN73 950 aa18.02■□□□□ 0.48
DDX41-205ENST00000505081 PCDHA8Q9Y5H6 950 aa18.02■□□□□ 0.48
DDX41-205ENST00000505081 EPN1Q9Y6I3 576 aaPredicted RBP18.02■□□□□ 0.48
DDX41-205ENST00000505081 CCDC194A0A1B0GVG4 234 aa18.02■□□□□ 0.48
DDX41-205ENST00000505081 MAP2K7O14733 419 aa18.02■□□□□ 0.48
DDX41-205ENST00000505081 KLRC4O43908 158 aa18.02■□□□□ 0.48
DDX41-205ENST00000505081 N4BP1O75113 896 aaKnown RBP18.02■□□□□ 0.48
DDX41-205ENST00000505081 KIF5BP33176 963 aa18.02■□□□□ 0.48
DDX41-205ENST00000505081 KLK7P49862 253 aa18.02■□□□□ 0.48
DDX41-205ENST00000505081 ARL6IP4Q66PJ3 421 aaKnown RBP18.02■□□□□ 0.48
DDX41-205ENST00000505081 DTHD1Q6ZMT9 781 aa18.02■□□□□ 0.48
DDX41-205ENST00000505081 MB21D1Q8N884 522 aa18.02■□□□□ 0.48
DDX41-205ENST00000505081 NKRFO15226 690 aaKnown RBP eCLIP18.02■□□□□ 0.47
DDX41-205ENST00000505081 NDUFA10O95299 355 aa18.02■□□□□ 0.47
DDX41-205ENST00000505081 GRIK5Q16478 980 aa18.02■□□□□ 0.47
DDX41-205ENST00000505081 PTF1AQ7RTS3 328 aa18.02■□□□□ 0.47
DDX41-205ENST00000505081 MAD2L2Q9UI95 211 aa18.02■□□□□ 0.47
DDX41-205ENST00000505081 CALML3P27482 149 aa18.01■□□□□ 0.47
DDX41-205ENST00000505081 DIXDC1Q155Q3 683 aa18.01■□□□□ 0.47
DDX41-205ENST00000505081 CLEC4GQ6UXB4 293 aa18.01■□□□□ 0.47
DDX41-205ENST00000505081 DZIP1Q86YF9 867 aaKnown RBP18.01■□□□□ 0.47
DDX41-205ENST00000505081 SH3RF3Q8TEJ3 882 aaPredicted RBP18.01■□□□□ 0.47
DDX41-205ENST00000505081 H7C1D1 291 aa18.01■□□□□ 0.47
DDX41-205ENST00000505081 M0R2N6 131 aa18.01■□□□□ 0.47
DDX41-205ENST00000505081 TAF3Q5VWG9 929 aa18.01■□□□□ 0.47
DDX41-205ENST00000505081 CASZ1Q86V15 1759 aa18.01■□□□□ 0.47
DDX41-205ENST00000505081 MSANTD4Q8NCY6 345 aa18.01■□□□□ 0.47
DDX41-205ENST00000505081 TRIM47Q96LD4 638 aa18.01■□□□□ 0.47
DDX41-205ENST00000505081 CTAGE15A4D2H0 777 aa18■□□□□ 0.47
DDX41-205ENST00000505081 B4DLN1 442 aa18■□□□□ 0.47
DDX41-205ENST00000505081 SRGAP2O75044 1071 aa18■□□□□ 0.47
DDX41-205ENST00000505081 CTAGE8P0CG41 777 aa18■□□□□ 0.47
DDX41-205ENST00000505081 UBA7P41226 1012 aa18■□□□□ 0.47
DDX41-205ENST00000505081 USP5P45974 858 aa18■□□□□ 0.47
DDX41-205ENST00000505081 FAM193AP78312 1265 aa18■□□□□ 0.47
DDX41-205ENST00000505081 SBK1Q52WX2 424 aa18■□□□□ 0.47
DDX41-205ENST00000505081 WDR59Q6PJI9 974 aa18■□□□□ 0.47
DDX41-205ENST00000505081 CTAGE6Q86UF2 777 aa18■□□□□ 0.47
DDX41-205ENST00000505081 CTAGE4Q8IX94 777 aa18■□□□□ 0.47
DDX41-205ENST00000505081 RAB21Q9UL25 225 aa18■□□□□ 0.47
DDX41-205ENST00000505081 AMPD2Q01433 879 aa18■□□□□ 0.47
DDX41-205ENST00000505081 GPR101Q96P66 508 aaPredicted RBP18■□□□□ 0.47
DDX41-205ENST00000505081 AGPAT5Q9NUQ2 364 aa18■□□□□ 0.47
DDX41-205ENST00000505081 MYO6Q9UM54 1294 aa18■□□□□ 0.47
DDX41-205ENST00000505081 STX8Q9UNK0 236 aa18■□□□□ 0.47
DDX41-205ENST00000505081 WNK3Q9BYP7 1800 aa18■□□□□ 0.47
DDX41-205ENST00000505081 RREB1Q92766 1687 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms