RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 EVX2Q03828 476 aa19.26■□□□□ 0.67
PDLIM7-213ENST00000505074 RAB30Q15771 203 aa19.26■□□□□ 0.67
PDLIM7-213ENST00000505074 RASIP1Q5U651 963 aa19.26■□□□□ 0.67
PDLIM7-213ENST00000505074 AMOTL1Q8IY63 956 aa19.26■□□□□ 0.67
PDLIM7-213ENST00000505074 TMEM199Q8N511 208 aa19.26■□□□□ 0.67
PDLIM7-213ENST00000505074 ATG4CQ96DT6 458 aa19.26■□□□□ 0.67
PDLIM7-213ENST00000505074 DCP1AQ9NPI6 582 aaPredicted RBP19.26■□□□□ 0.67
PDLIM7-213ENST00000505074 DIS3Q9Y2L1 958 aaKnown RBP19.26■□□□□ 0.67
PDLIM7-213ENST00000505074 SMARCA5O60264 1052 aaPredicted RBP19.25■□□□□ 0.67
PDLIM7-213ENST00000505074 TAL1P17542 331 aaPredicted RBP19.25■□□□□ 0.67
PDLIM7-213ENST00000505074 ADD2P35612 726 aa19.25■□□□□ 0.67
PDLIM7-213ENST00000505074 SLFNL1Q499Z3 407 aa19.25■□□□□ 0.67
PDLIM7-213ENST00000505074 PSRC1Q6PGN9 363 aaPredicted RBP19.25■□□□□ 0.67
PDLIM7-213ENST00000505074 C16orf59Q7L2K0 433 aa19.25■□□□□ 0.67
PDLIM7-213ENST00000505074 DDRGK1Q96HY6 314 aa19.25■□□□□ 0.67
PDLIM7-213ENST00000505074 HAUS7Q99871 368 aa19.25■□□□□ 0.67
PDLIM7-213ENST00000505074 CNPY2Q9Y2B0 182 aa19.25■□□□□ 0.67
PDLIM7-213ENST00000505074 BDP1A6H8Y1 2624 aa19.24■□□□□ 0.67
PDLIM7-213ENST00000505074 PRKAB2O43741 272 aa19.24■□□□□ 0.67
PDLIM7-213ENST00000505074 PGK2P07205 417 aa19.24■□□□□ 0.67
PDLIM7-213ENST00000505074 ZNF865P0CJ78 1059 aaPredicted RBP19.24■□□□□ 0.67
PDLIM7-213ENST00000505074 CSF2RAP15509 400 aa19.24■□□□□ 0.67
PDLIM7-213ENST00000505074 GABPAQ06546 454 aa19.24■□□□□ 0.67
PDLIM7-213ENST00000505074 KCTD2Q14681 263 aa19.24■□□□□ 0.67
PDLIM7-213ENST00000505074 SAMD1Q6SPF0 538 aaPredicted RBP19.24■□□□□ 0.67
PDLIM7-213ENST00000505074 ZNF365Q70YC5 407 aa19.24■□□□□ 0.67
PDLIM7-213ENST00000505074 LENG1Q96BZ8 264 aaPredicted RBP19.24■□□□□ 0.67
PDLIM7-213ENST00000505074 GLT1D1Q96MS3 346 aa19.24■□□□□ 0.67
PDLIM7-213ENST00000505074 SLC28A3Q9HAS3 691 aa19.24■□□□□ 0.67
PDLIM7-213ENST00000505074 CXXC1Q9P0U4 656 aaPredicted RBP19.24■□□□□ 0.67
PDLIM7-213ENST00000505074 ARIH1Q9Y4X5 557 aaPredicted RBP19.24■□□□□ 0.67
PDLIM7-213ENST00000505074 TMEM132BQ14DG7 1078 aa19.23■□□□□ 0.67
PDLIM7-213ENST00000505074 KCNA10Q16322 511 aa19.23■□□□□ 0.67
PDLIM7-213ENST00000505074 ZNF792Q3KQV3 632 aa19.23■□□□□ 0.67
PDLIM7-213ENST00000505074 ZSCAN25Q6NSZ9 544 aa19.23■□□□□ 0.67
PDLIM7-213ENST00000505074 DYNLL2Q96FJ2 89 aa19.23■□□□□ 0.67
PDLIM7-213ENST00000505074 MTIF3Q9H2K0 278 aaKnown RBP19.23■□□□□ 0.67
PDLIM7-213ENST00000505074 ATP8A2Q9NTI2 1148 aa19.23■□□□□ 0.67
PDLIM7-213ENST00000505074 SWAP70Q9UH65 585 aa19.23■□□□□ 0.67
PDLIM7-213ENST00000505074 HCN4Q9Y3Q4 1203 aa19.23■□□□□ 0.67
PDLIM7-213ENST00000505074 ELP1O95163 1332 aa19.23■□□□□ 0.67
PDLIM7-213ENST00000505074 SYNRGQ9UMZ2 1314 aa19.23■□□□□ 0.67
PDLIM7-213ENST00000505074 ACRP10323 421 aa19.22■□□□□ 0.67
PDLIM7-213ENST00000505074 BMP1P13497 986 aa19.22■□□□□ 0.67
PDLIM7-213ENST00000505074 AAK1Q2M2I8 961 aa19.22■□□□□ 0.67
PDLIM7-213ENST00000505074 KIAA1755Q5JYT7 1200 aa19.22■□□□□ 0.67
PDLIM7-213ENST00000505074 TMEM179Q6ZVK1 233 aa19.22■□□□□ 0.67
PDLIM7-213ENST00000505074 KLHDC9Q8NEP7 349 aa19.22■□□□□ 0.67
PDLIM7-213ENST00000505074 NECAB3Q96P71 396 aaPredicted RBP19.22■□□□□ 0.67
PDLIM7-213ENST00000505074 NKX2-4Q9H2Z4 354 aa19.22■□□□□ 0.67
PDLIM7-213ENST00000505074 SH2D4AQ9H788 454 aa19.22■□□□□ 0.67
PDLIM7-213ENST00000505074 ARHGEF10LQ9HCE6 1279 aa19.22■□□□□ 0.67
PDLIM7-213ENST00000505074 FAM184BQ9ULE4 1060 aa19.22■□□□□ 0.67
PDLIM7-213ENST00000505074 RIOX2Q8IUF8 465 aa19.21■□□□□ 0.67
PDLIM7-213ENST00000505074 SPICE1Q8N0Z3 855 aa19.21■□□□□ 0.67
PDLIM7-213ENST00000505074 VTI1AQ96AJ9 217 aa19.21■□□□□ 0.67
PDLIM7-213ENST00000505074 GPATCH3Q96I76 525 aa19.21■□□□□ 0.67
PDLIM7-213ENST00000505074 SLC4A4Q9Y6R1 1079 aa19.21■□□□□ 0.67
PDLIM7-213ENST00000505074 SYNGAP1Q96PV0 1343 aa19.21■□□□□ 0.67
PDLIM7-213ENST00000505074 CYP2D7A0A087X1C5 515 aa19.2■□□□□ 0.66
PDLIM7-213ENST00000505074 WDR46O15213 610 aaKnown RBP19.2■□□□□ 0.66
PDLIM7-213ENST00000505074 TLR3O15455 904 aaKnown RBP19.2■□□□□ 0.66
PDLIM7-213ENST00000505074 CHGBP05060 677 aa19.2■□□□□ 0.66
PDLIM7-213ENST00000505074 CDK7P50613 346 aa19.2■□□□□ 0.66
PDLIM7-213ENST00000505074 ICA1Q05084 483 aa19.2■□□□□ 0.66
PDLIM7-213ENST00000505074 CCSAPQ6IQ19 270 aaPredicted RBP19.2■□□□□ 0.66
PDLIM7-213ENST00000505074 PCSK9Q8NBP7 692 aaKnown RBP19.2■□□□□ 0.66
PDLIM7-213ENST00000505074 HERVK_113Q902F9 699 aa19.2■□□□□ 0.66
PDLIM7-213ENST00000505074 PPP1R12CQ9BZL4 782 aa19.2■□□□□ 0.66
PDLIM7-213ENST00000505074 VCPKMTQ9H867 229 aa19.2■□□□□ 0.66
PDLIM7-213ENST00000505074 TMX2Q9Y320 296 aa19.2■□□□□ 0.66
PDLIM7-213ENST00000505074 AKR1B1P15121 316 aa19.19■□□□□ 0.66
PDLIM7-213ENST00000505074 COPB2P35606 906 aa19.19■□□□□ 0.66
PDLIM7-213ENST00000505074 UBE3CQ15386 1083 aa19.19■□□□□ 0.66
PDLIM7-213ENST00000505074 CLEC10AQ8IUN9 316 aa19.19■□□□□ 0.66
PDLIM7-213ENST00000505074 MSL3Q8N5Y2 521 aaKnown RBP19.19■□□□□ 0.66
PDLIM7-213ENST00000505074 IL23AQ9NPF7 189 aa19.19■□□□□ 0.66
PDLIM7-213ENST00000505074 ECHDC1Q9NTX5 307 aa19.19■□□□□ 0.66
PDLIM7-213ENST00000505074 ADAMTS5Q9UNA0 930 aa19.19■□□□□ 0.66
PDLIM7-213ENST00000505074 A0A0U1RQG5 324 aaPredicted RBP19.18■□□□□ 0.66
PDLIM7-213ENST00000505074 USP17L12C9JPN9 530 aa19.18■□□□□ 0.66
PDLIM7-213ENST00000505074 USP17L21D6R901 530 aa19.18■□□□□ 0.66
PDLIM7-213ENST00000505074 ARVCFO00192 962 aa19.18■□□□□ 0.66
PDLIM7-213ENST00000505074 RAD21O60216 631 aa19.18■□□□□ 0.66
PDLIM7-213ENST00000505074 DUSP11O75319 330 aaKnown RBP19.18■□□□□ 0.66
PDLIM7-213ENST00000505074 FGBP02675 491 aa19.18■□□□□ 0.66
PDLIM7-213ENST00000505074 CST5P28325 142 aaPredicted RBP19.18■□□□□ 0.66
PDLIM7-213ENST00000505074 STAT3P40763 770 aa19.18■□□□□ 0.66
PDLIM7-213ENST00000505074 MICALL1Q8N3F8 863 aa19.18■□□□□ 0.66
PDLIM7-213ENST00000505074 LRFN3Q9BTN0 628 aa19.18■□□□□ 0.66
PDLIM7-213ENST00000505074 SPC25Q9HBM1 224 aa19.18■□□□□ 0.66
PDLIM7-213ENST00000505074 ZHX1Q9UKY1 873 aaPredicted RBP19.18■□□□□ 0.66
PDLIM7-213ENST00000505074 CHD9Q3L8U1 2897 aa19.18■□□□□ 0.66
PDLIM7-213ENST00000505074 ASGR1P07306 291 aa19.17■□□□□ 0.66
PDLIM7-213ENST00000505074 C6orf222P0C671 652 aaPredicted RBP19.17■□□□□ 0.66
PDLIM7-213ENST00000505074 CDK8P49336 464 aa19.17■□□□□ 0.66
PDLIM7-213ENST00000505074 TFF2Q03403 129 aa19.17■□□□□ 0.66
PDLIM7-213ENST00000505074 C12orf60Q5U649 245 aa19.17■□□□□ 0.66
PDLIM7-213ENST00000505074 TSHZ3Q63HK5 1081 aa19.17■□□□□ 0.66
PDLIM7-213ENST00000505074 FAM126BQ8IXS8 530 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms