RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 FANCCQ00597 558 aa8.09□□□□□ -1.11
DEPDC1B-203ENST00000505017 SNX17Q15036 470 aa8.09□□□□□ -1.11
DEPDC1B-203ENST00000505017 NKD1Q969G9 470 aa8.09□□□□□ -1.11
DEPDC1B-203ENST00000505017 SGPP1Q9BX95 441 aa8.09□□□□□ -1.11
DEPDC1B-203ENST00000505017 C9IYK1 514 aa8.08□□□□□ -1.12
DEPDC1B-203ENST00000505017 NRDCO43847 1150 aa8.08□□□□□ -1.12
DEPDC1B-203ENST00000505017 ZNF165P49910 485 aa8.08□□□□□ -1.12
DEPDC1B-203ENST00000505017 LINC00310P59036 64 aa8.08□□□□□ -1.12
DEPDC1B-203ENST00000505017 DLG4P78352 724 aa8.08□□□□□ -1.12
DEPDC1B-203ENST00000505017 ZNF394Q53GI3 561 aa8.08□□□□□ -1.12
DEPDC1B-203ENST00000505017 SIAH1Q8IUQ4 282 aa8.08□□□□□ -1.12
DEPDC1B-203ENST00000505017 KIAA0825Q8IV33 1275 aa8.08□□□□□ -1.12
DEPDC1B-203ENST00000505017 SPON2Q9BUD6 331 aa8.08□□□□□ -1.12
DEPDC1B-203ENST00000505017 ASCC2Q9H1I8 757 aaPredicted RBP8.08□□□□□ -1.12
DEPDC1B-203ENST00000505017 EIF4G1Q04637 1599 aaKnown RBP8.08□□□□□ -1.12
DEPDC1B-203ENST00000505017 PEX10O60683 326 aa8.07□□□□□ -1.12
DEPDC1B-203ENST00000505017 SDHBP21912 280 aa8.07□□□□□ -1.12
DEPDC1B-203ENST00000505017 PCBP3P57721 371 aaKnown RBP8.07□□□□□ -1.12
DEPDC1B-203ENST00000505017 RAD51AP2Q09MP3 1159 aa8.07□□□□□ -1.12
DEPDC1B-203ENST00000505017 CHST7Q9NS84 486 aa8.07□□□□□ -1.12
DEPDC1B-203ENST00000505017 GFOD1Q9NXC2 390 aa8.07□□□□□ -1.12
DEPDC1B-203ENST00000505017 ZMYM5Q9UJ78 669 aa8.07□□□□□ -1.12
DEPDC1B-203ENST00000505017 ZNRF3Q9ULT6 936 aa8.07□□□□□ -1.12
DEPDC1B-203ENST00000505017 PCDHGB7Q9Y5F8 929 aa8.07□□□□□ -1.12
DEPDC1B-203ENST00000505017 ATAD2BQ9ULI0 1458 aa8.06□□□□□ -1.12
DEPDC1B-203ENST00000505017 FAM86C2PA6NEL3 165 aa8.06□□□□□ -1.12
DEPDC1B-203ENST00000505017 MEIS1O00470 390 aa8.06□□□□□ -1.12
DEPDC1B-203ENST00000505017 KIR2DL1P43626 348 aaPredicted RBP8.06□□□□□ -1.12
DEPDC1B-203ENST00000505017 KIR2DL2P43627 348 aaPredicted RBP8.06□□□□□ -1.12
DEPDC1B-203ENST00000505017 RACK1P63244 317 aaKnown RBP8.06□□□□□ -1.12
DEPDC1B-203ENST00000505017 ZSCAN18Q8TBC5 510 aaPredicted RBP8.06□□□□□ -1.12
DEPDC1B-203ENST00000505017 TCAF2A6NFQ2 919 aa8.05□□□□□ -1.12
DEPDC1B-203ENST00000505017 FADS2P1A8MWK0 482 aa8.05□□□□□ -1.12
DEPDC1B-203ENST00000505017 PDE6BP35913 854 aa8.05□□□□□ -1.12
DEPDC1B-203ENST00000505017 ZNF76P36508 570 aa8.05□□□□□ -1.12
DEPDC1B-203ENST00000505017 AUHQ13825 339 aaKnown RBP8.05□□□□□ -1.12
DEPDC1B-203ENST00000505017 CEP128Q6ZU80 1094 aa8.05□□□□□ -1.12
DEPDC1B-203ENST00000505017 PPFIBP1Q86W92 1011 aa8.05□□□□□ -1.12
DEPDC1B-203ENST00000505017 TMEM52Q8NDY8 209 aa8.05□□□□□ -1.12
DEPDC1B-203ENST00000505017 ERVK13-1Q9NX77 482 aa8.05□□□□□ -1.12
DEPDC1B-203ENST00000505017 HMGXB3Q12766 1538 aa8.04□□□□□ -1.12
DEPDC1B-203ENST00000505017 TEX51A0A1B0GUA7 166 aa8.04□□□□□ -1.12
DEPDC1B-203ENST00000505017 ZNF205O95201 554 aa8.04□□□□□ -1.12
DEPDC1B-203ENST00000505017 CHMP4BP1P59074 171 aa8.04□□□□□ -1.12
DEPDC1B-203ENST00000505017 ZYXQ15942 572 aaKnown RBP8.04□□□□□ -1.12
DEPDC1B-203ENST00000505017 LRRFIP1Q32MZ4 808 aaKnown RBP8.04□□□□□ -1.12
DEPDC1B-203ENST00000505017 ADGRF1Q5T601 910 aa8.04□□□□□ -1.12
DEPDC1B-203ENST00000505017 INTS3Q68E01 1043 aaKnown RBP8.04□□□□□ -1.12
DEPDC1B-203ENST00000505017 SYTL4Q96C24 671 aaPredicted RBP8.04□□□□□ -1.12
DEPDC1B-203ENST00000505017 MKRN2Q9H000 416 aaKnown RBP8.04□□□□□ -1.12
DEPDC1B-203ENST00000505017 SUCOQ9UBS9 1254 aaKnown RBP8.04□□□□□ -1.12
DEPDC1B-203ENST00000505017 NCAPD3P42695 1498 aa8.03□□□□□ -1.12
DEPDC1B-203ENST00000505017 SEMA7AO75326 666 aa8.03□□□□□ -1.12
DEPDC1B-203ENST00000505017 RTP2Q5QGT7 225 aa8.03□□□□□ -1.12
DEPDC1B-203ENST00000505017 CRTC3Q6UUV7 619 aa8.03□□□□□ -1.12
DEPDC1B-203ENST00000505017 RUFY4Q6ZNE9 571 aa8.03□□□□□ -1.12
DEPDC1B-203ENST00000505017 USP48Q86UV5 1035 aa8.03□□□□□ -1.12
DEPDC1B-203ENST00000505017 IRF2BPLQ9H1B7 796 aa8.03□□□□□ -1.12
DEPDC1B-203ENST00000505017 MBD1Q9UIS9 605 aaPredicted RBP8.03□□□□□ -1.12
DEPDC1B-203ENST00000505017 ADAMTS20P59510 1910 aa8.03□□□□□ -1.12
DEPDC1B-203ENST00000505017 BAZ1BQ9UIG0 1483 aaKnown RBP8.02□□□□□ -1.13
DEPDC1B-203ENST00000505017 VAV1P15498 845 aa8.02□□□□□ -1.13
DEPDC1B-203ENST00000505017 BMP8BP34820 402 aa8.02□□□□□ -1.13
DEPDC1B-203ENST00000505017 RTP1P59025 263 aa8.02□□□□□ -1.13
DEPDC1B-203ENST00000505017 SSPNQ14714 243 aa8.02□□□□□ -1.13
DEPDC1B-203ENST00000505017 HSF5Q4G112 596 aaPredicted RBP8.02□□□□□ -1.13
DEPDC1B-203ENST00000505017 TTLL10Q6ZVT0 673 aa8.02□□□□□ -1.13
DEPDC1B-203ENST00000505017 SLCO6A1Q86UG4 719 aa8.02□□□□□ -1.13
DEPDC1B-203ENST00000505017 FCRL2Q96LA5 508 aaPredicted RBP8.02□□□□□ -1.13
DEPDC1B-203ENST00000505017 CRTAC1Q9NQ79 661 aa8.02□□□□□ -1.13
DEPDC1B-203ENST00000505017 PPT2Q9UMR5 302 aa8.02□□□□□ -1.13
DEPDC1B-203ENST00000505017 GPR55Q9Y2T6 319 aaPredicted RBP8.02□□□□□ -1.13
DEPDC1B-203ENST00000505017 PCDHB12Q9Y5F1 795 aa8.02□□□□□ -1.13
DEPDC1B-203ENST00000505017 OR14I1A6ND48 311 aa8.01□□□□□ -1.13
DEPDC1B-203ENST00000505017 NUAK1O60285 661 aa8.01□□□□□ -1.13
DEPDC1B-203ENST00000505017 TDRD10Q5VZ19 366 aaKnown RBP8.01□□□□□ -1.13
DEPDC1B-203ENST00000505017 CIAPIN1Q6FI81 312 aa8.01□□□□□ -1.13
DEPDC1B-203ENST00000505017 C7orf61Q8IZ16 206 aa8.01□□□□□ -1.13
DEPDC1B-203ENST00000505017 EPB41L4AQ9HCS5 686 aaPredicted RBP8.01□□□□□ -1.13
DEPDC1B-203ENST00000505017 AP5S1Q9NUS5 200 aa8.01□□□□□ -1.13
DEPDC1B-203ENST00000505017 DDX41Q9UJV9 622 aaKnown RBP8.01□□□□□ -1.13
DEPDC1B-203ENST00000505017 FBXL21Q9UKT6 434 aa8.01□□□□□ -1.13
DEPDC1B-203ENST00000505017 RECKO95980 971 aa8□□□□□ -1.13
DEPDC1B-203ENST00000505017 PNLIPP16233 465 aa8□□□□□ -1.13
DEPDC1B-203ENST00000505017 PMS1P54277 932 aaKnown RBP8□□□□□ -1.13
DEPDC1B-203ENST00000505017 EPHB3P54753 998 aa8□□□□□ -1.13
DEPDC1B-203ENST00000505017 YBX1P67809 324 aaKnown RBP8□□□□□ -1.13
DEPDC1B-203ENST00000505017 SLC14A2Q15849 920 aa8□□□□□ -1.13
DEPDC1B-203ENST00000505017 AXDND1Q5T1B0 1012 aaPredicted RBP8□□□□□ -1.13
DEPDC1B-203ENST00000505017 DCAF15Q66K64 600 aa8□□□□□ -1.13
DEPDC1B-203ENST00000505017 TAB3Q8N5C8 712 aaPredicted RBP8□□□□□ -1.13
DEPDC1B-203ENST00000505017 PANK1Q8TE04 598 aa8□□□□□ -1.13
DEPDC1B-203ENST00000505017 CNTD2Q9H8S5 307 aa8□□□□□ -1.13
DEPDC1B-203ENST00000505017 TNFRSF10DQ9UBN6 386 aa8□□□□□ -1.13
DEPDC1B-203ENST00000505017 SSU72P8A0A1W2PR75 194 aa7.99□□□□□ -1.13
DEPDC1B-203ENST00000505017 VIPR1P32241 457 aa7.99□□□□□ -1.13
DEPDC1B-203ENST00000505017 ERVFRD-1P60508 538 aa7.99□□□□□ -1.13
DEPDC1B-203ENST00000505017 TMCO4Q5TGY1 634 aa7.99□□□□□ -1.13
DEPDC1B-203ENST00000505017 SLC12A9Q9BXP2 914 aa7.99□□□□□ -1.13
DEPDC1B-203ENST00000505017 METTL5Q9NRN9 209 aaKnown RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms