RNA–Protein interactions for RNA: ENST00000504956.5

AFF1-205, Transcript of AF4/FMR2 family member 1, humanhuman

TSL 2

Gene AFF1, Length 1,668 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-205ENST00000504956 CPA4Q9UI42 421 aa18.48■□□□□ 0.55
AFF1-205ENST00000504956 CASP8AP2Q9UKL3 1982 aa18.48■□□□□ 0.55
AFF1-205ENST00000504956 TLR2O60603 784 aa18.47■□□□□ 0.55
AFF1-205ENST00000504956 POTEEQ6S8J3 1075 aa18.47■□□□□ 0.55
AFF1-205ENST00000504956 FAM160B2Q86V87 743 aa18.47■□□□□ 0.55
AFF1-205ENST00000504956 CHURC1Q8WUH1 139 aa18.47■□□□□ 0.55
AFF1-205ENST00000504956 UBA5Q9GZZ9 404 aa18.47■□□□□ 0.55
AFF1-205ENST00000504956 SAGE1Q9NXZ1 904 aa18.47■□□□□ 0.55
AFF1-205ENST00000504956 DOCK3Q8IZD9 2030 aa18.47■□□□□ 0.55
AFF1-205ENST00000504956 PALM3A6NDB9 673 aaPredicted RBP18.47■□□□□ 0.55
AFF1-205ENST00000504956 GOLGA8AA7E2F4 631 aa18.47■□□□□ 0.55
AFF1-205ENST00000504956 CALM1P0DP23 149 aa18.47■□□□□ 0.55
AFF1-205ENST00000504956 CALM2P0DP24 149 aa18.47■□□□□ 0.55
AFF1-205ENST00000504956 CALM3P0DP25 149 aa18.47■□□□□ 0.55
AFF1-205ENST00000504956 SYDE2Q5VT97 1194 aa18.47■□□□□ 0.55
AFF1-205ENST00000504956 ANKRD13CQ8N6S4 541 aa18.47■□□□□ 0.55
AFF1-205ENST00000504956 PRPF38AQ8NAV1 312 aaKnown RBP18.47■□□□□ 0.55
AFF1-205ENST00000504956 ALDH8A1Q9H2A2 487 aaPredicted RBP18.47■□□□□ 0.55
AFF1-205ENST00000504956 HOXC10Q9NYD6 342 aa18.47■□□□□ 0.55
AFF1-205ENST00000504956 MYPNQ86TC9 1320 aa18.47■□□□□ 0.55
AFF1-205ENST00000504956 KLRF2D3W0D1 207 aa18.46■□□□□ 0.55
AFF1-205ENST00000504956 SNAP25P60880 206 aa18.46■□□□□ 0.55
AFF1-205ENST00000504956 MAP3K14Q99558 947 aa18.46■□□□□ 0.55
AFF1-205ENST00000504956 CFHR5Q9BXR6 569 aa18.46■□□□□ 0.55
AFF1-205ENST00000504956 TXNRD2Q9NNW7 524 aa18.46■□□□□ 0.55
AFF1-205ENST00000504956 PRR12Q9ULL5 1215 aa18.46■□□□□ 0.55
AFF1-205ENST00000504956 HPS5Q9UPZ3 1129 aa18.46■□□□□ 0.55
AFF1-205ENST00000504956 PLXNB2O15031 1838 aa18.45■□□□□ 0.54
AFF1-205ENST00000504956 PLA2G6O60733 806 aa18.45■□□□□ 0.54
AFF1-205ENST00000504956 PLEKHA8P1O95397 391 aa18.45■□□□□ 0.54
AFF1-205ENST00000504956 KIF5BP33176 963 aa18.45■□□□□ 0.54
AFF1-205ENST00000504956 METAP2P50579 478 aaKnown RBP eCLIP18.45■□□□□ 0.54
AFF1-205ENST00000504956 STK3Q13188 491 aa18.45■□□□□ 0.54
AFF1-205ENST00000504956 ANKRD1Q15327 319 aa18.45■□□□□ 0.54
AFF1-205ENST00000504956 RTN1Q16799 776 aa18.45■□□□□ 0.54
AFF1-205ENST00000504956 BTNL9Q6UXG8 535 aa18.45■□□□□ 0.54
AFF1-205ENST00000504956 LBX2Q6XYB7 198 aa18.45■□□□□ 0.54
AFF1-205ENST00000504956 CMTR1Q8N1G2 835 aaKnown RBP18.45■□□□□ 0.54
AFF1-205ENST00000504956 FANCBQ8NB91 859 aa18.45■□□□□ 0.54
AFF1-205ENST00000504956 BTBD7Q9P203 1132 aa18.45■□□□□ 0.54
AFF1-205ENST00000504956 TPCN1Q9ULQ1 816 aa18.45■□□□□ 0.54
AFF1-205ENST00000504956 VWA5AO00534 786 aa18.44■□□□□ 0.54
AFF1-205ENST00000504956 DHX16O60231 1041 aaKnown RBP18.44■□□□□ 0.54
AFF1-205ENST00000504956 CNMDO75829 334 aa18.44■□□□□ 0.54
AFF1-205ENST00000504956 HSPA1AP0DMV8 641 aaKnown RBP18.44■□□□□ 0.54
AFF1-205ENST00000504956 HSPA1BP0DMV9 641 aaKnown RBP18.44■□□□□ 0.54
AFF1-205ENST00000504956 PDIA3P30101 505 aaKnown RBP18.44■□□□□ 0.54
AFF1-205ENST00000504956 CDC27P30260 824 aa18.44■□□□□ 0.54
AFF1-205ENST00000504956 GCLCP48506 637 aaPredicted RBP18.44■□□□□ 0.54
AFF1-205ENST00000504956 EVCP57679 992 aa18.44■□□□□ 0.54
AFF1-205ENST00000504956 CCT2P78371 535 aaKnown RBP18.44■□□□□ 0.54
AFF1-205ENST00000504956 C17orf99Q6UX52 265 aa18.44■□□□□ 0.54
AFF1-205ENST00000504956 NBPF11Q86T75 865 aa18.44■□□□□ 0.54
AFF1-205ENST00000504956 RBPJLQ9UBG7 517 aa18.44■□□□□ 0.54
AFF1-205ENST00000504956 ZNFX1Q9P2E3 1918 aaKnown RBP18.44■□□□□ 0.54
AFF1-205ENST00000504956 NID2Q14112 1375 aa18.44■□□□□ 0.54
AFF1-205ENST00000504956 ECM2O94769 699 aaPredicted RBP18.44■□□□□ 0.54
AFF1-205ENST00000504956 BCRP11274 1271 aa18.44■□□□□ 0.54
AFF1-205ENST00000504956 SLC35G1Q2M3R5 365 aa18.44■□□□□ 0.54
AFF1-205ENST00000504956 ADGRF4Q8IZF3 695 aa18.44■□□□□ 0.54
AFF1-205ENST00000504956 GTF3C2Q8WUA4 911 aaPredicted RBP18.44■□□□□ 0.54
AFF1-205ENST00000504956 NCOA5Q9HCD5 579 aaKnown RBP18.44■□□□□ 0.54
AFF1-205ENST00000504956 VAT1LQ9HCJ6 419 aa18.44■□□□□ 0.54
AFF1-205ENST00000504956 ADAMTS5Q9UNA0 930 aa18.44■□□□□ 0.54
AFF1-205ENST00000504956 CTDP1Q9Y5B0 961 aaPredicted RBP18.44■□□□□ 0.54
AFF1-205ENST00000504956 RBBP6Q7Z6E9 1792 aaKnown RBP18.43■□□□□ 0.54
AFF1-205ENST00000504956 FOXN1O15353 648 aa18.43■□□□□ 0.54
AFF1-205ENST00000504956 LARGE1O95461 756 aa18.43■□□□□ 0.54
AFF1-205ENST00000504956 RCAN1P53805 252 aa18.43■□□□□ 0.54
AFF1-205ENST00000504956 ERVK-9P63128 1117 aa18.43■□□□□ 0.54
AFF1-205ENST00000504956 ERVK-24P63145 666 aa18.43■□□□□ 0.54
AFF1-205ENST00000504956 PLS1Q14651 629 aa18.43■□□□□ 0.54
AFF1-205ENST00000504956 CCDC174Q6PII3 467 aa18.43■□□□□ 0.54
AFF1-205ENST00000504956 TMTC3Q6ZXV5 915 aa18.43■□□□□ 0.54
AFF1-205ENST00000504956 CCDC82Q8N4S0 544 aa18.43■□□□□ 0.54
AFF1-205ENST00000504956 REPS2Q8NFH8 660 aa18.43■□□□□ 0.54
AFF1-205ENST00000504956 ZNF274Q96GC6 653 aaPredicted RBP18.43■□□□□ 0.54
AFF1-205ENST00000504956 SLC38A10Q9HBR0 1119 aa18.43■□□□□ 0.54
AFF1-205ENST00000504956 FAM217BQ9NTX9 383 aaPredicted RBP18.43■□□□□ 0.54
AFF1-205ENST00000504956 RBM28Q9NW13 759 aaKnown RBP18.43■□□□□ 0.54
AFF1-205ENST00000504956 CYTH3O43739 400 aa18.42■□□□□ 0.54
AFF1-205ENST00000504956 ST18O60284 1047 aa18.42■□□□□ 0.54
AFF1-205ENST00000504956 ZBED4O75132 1171 aa18.42■□□□□ 0.54
AFF1-205ENST00000504956 CD2BP2O95400 341 aaKnown RBP18.42■□□□□ 0.54
AFF1-205ENST00000504956 ADD1P35611 737 aaKnown RBP18.42■□□□□ 0.54
AFF1-205ENST00000504956 TMEM132BQ14DG7 1078 aa18.42■□□□□ 0.54
AFF1-205ENST00000504956 FAM110CQ1W6H9 321 aa18.42■□□□□ 0.54
AFF1-205ENST00000504956 CPXCR1Q8N123 301 aa18.42■□□□□ 0.54
AFF1-205ENST00000504956 SRBD1Q8N5C6 995 aaKnown RBP18.42■□□□□ 0.54
AFF1-205ENST00000504956 MB21D1Q8N884 522 aa18.42■□□□□ 0.54
AFF1-205ENST00000504956 PIBF1Q8WXW3 757 aa18.42■□□□□ 0.54
AFF1-205ENST00000504956 RABGAP1Q9Y3P9 1069 aa18.42■□□□□ 0.54
AFF1-205ENST00000504956 GPR25O00155 361 aa18.41■□□□□ 0.54
AFF1-205ENST00000504956 TAL1P17542 331 aaPredicted RBP18.41■□□□□ 0.54
AFF1-205ENST00000504956 ME3Q16798 604 aa18.41■□□□□ 0.54
AFF1-205ENST00000504956 Q3C1V9 767 aa18.41■□□□□ 0.54
AFF1-205ENST00000504956 RANBP17Q9H2T7 1088 aaKnown RBP18.41■□□□□ 0.54
AFF1-205ENST00000504956 JMJD4Q9H9V9 463 aa18.41■□□□□ 0.54
AFF1-205ENST00000504956 RAVER2Q9HCJ3 691 aaKnown RBP18.41■□□□□ 0.54
AFF1-205ENST00000504956 MORF4L1Q9UBU8 362 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms