RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 STAT3P40763 770 aa8.32□□□□□ -1.08
NPIPB3-203ENST00000504841 PPIGQ13427 754 aaKnown RBP eCLIP8.32□□□□□ -1.08
NPIPB3-203ENST00000504841 TTF1Q15361 905 aaPredicted RBP8.32□□□□□ -1.08
NPIPB3-203ENST00000504841 SLFNL1Q499Z3 407 aa8.32□□□□□ -1.08
NPIPB3-203ENST00000504841 FAM83BQ5T0W9 1011 aa8.32□□□□□ -1.08
NPIPB3-203ENST00000504841 SIAH1Q8IUQ4 282 aa8.32□□□□□ -1.08
NPIPB3-203ENST00000504841 MICALL1Q8N3F8 863 aa8.32□□□□□ -1.08
NPIPB3-203ENST00000504841 DDX11Q96FC9 970 aa8.32□□□□□ -1.08
NPIPB3-203ENST00000504841 GLT1D1Q96MS3 346 aa8.32□□□□□ -1.08
NPIPB3-203ENST00000504841 PBX4Q9BYU1 374 aa8.32□□□□□ -1.08
NPIPB3-203ENST00000504841 NRBP1Q9UHY1 535 aa8.32□□□□□ -1.08
NPIPB3-203ENST00000504841 TBX21Q9UL17 535 aa8.32□□□□□ -1.08
NPIPB3-203ENST00000504841 UNC80Q8N2C7 3258 aa8.32□□□□□ -1.08
NPIPB3-203ENST00000504841 MOXD2PA6NHM9 499 aa8.31□□□□□ -1.08
NPIPB3-203ENST00000504841 VWA5AO00534 786 aa8.31□□□□□ -1.08
NPIPB3-203ENST00000504841 MBD4O95243 580 aa8.31□□□□□ -1.08
NPIPB3-203ENST00000504841 TIMP1P01033 207 aa8.31□□□□□ -1.08
NPIPB3-203ENST00000504841 NUBP1P53384 320 aa8.31□□□□□ -1.08
NPIPB3-203ENST00000504841 ADGRE1Q14246 886 aa8.31□□□□□ -1.08
NPIPB3-203ENST00000504841 KCNA10Q16322 511 aa8.31□□□□□ -1.08
NPIPB3-203ENST00000504841 TMEM240Q5SV17 173 aa8.31□□□□□ -1.08
NPIPB3-203ENST00000504841 SNRNP48Q6IEG0 339 aaKnown RBP8.31□□□□□ -1.08
NPIPB3-203ENST00000504841 MFSD5Q6N075 450 aa8.31□□□□□ -1.08
NPIPB3-203ENST00000504841 CCDC174Q6PII3 467 aa8.31□□□□□ -1.08
NPIPB3-203ENST00000504841 ANKRD33Q7Z3H0 272 aa8.31□□□□□ -1.08
NPIPB3-203ENST00000504841 ERC1Q8IUD2 1116 aa8.31□□□□□ -1.08
NPIPB3-203ENST00000504841 AMOTL1Q8IY63 956 aa8.31□□□□□ -1.08
NPIPB3-203ENST00000504841 CPXCR1Q8N123 301 aa8.31□□□□□ -1.08
NPIPB3-203ENST00000504841 STK11IPQ8N1F8 1099 aa8.31□□□□□ -1.08
NPIPB3-203ENST00000504841 ATXN2LQ8WWM7 1075 aaKnown RBP8.31□□□□□ -1.08
NPIPB3-203ENST00000504841 SPOCK2Q92563 424 aa8.31□□□□□ -1.08
NPIPB3-203ENST00000504841 TOX2Q96NM4 488 aa8.31□□□□□ -1.08
NPIPB3-203ENST00000504841 ASB2Q96Q27 587 aa8.31□□□□□ -1.08
NPIPB3-203ENST00000504841 UHRF1Q96T88 793 aaPredicted RBP8.31□□□□□ -1.08
NPIPB3-203ENST00000504841 NUP88Q99567 741 aaPredicted RBP8.31□□□□□ -1.08
NPIPB3-203ENST00000504841 TSEN34Q9BSV6 310 aaKnown RBP8.31□□□□□ -1.08
NPIPB3-203ENST00000504841 NKX2-4Q9H2Z4 354 aa8.31□□□□□ -1.08
NPIPB3-203ENST00000504841 GOPCQ9HD26 462 aa8.31□□□□□ -1.08
NPIPB3-203ENST00000504841 ZNF214Q9UL59 606 aaPredicted RBP8.31□□□□□ -1.08
NPIPB3-203ENST00000504841 FAM184BQ9ULE4 1060 aa8.31□□□□□ -1.08
NPIPB3-203ENST00000504841 PPP1R9AQ9ULJ8 1098 aa8.31□□□□□ -1.08
NPIPB3-203ENST00000504841 ZNFX1Q9P2E3 1918 aaKnown RBP8.31□□□□□ -1.08
NPIPB3-203ENST00000504841 BAZ2AQ9UIF9 1905 aaKnown RBP8.31□□□□□ -1.08
NPIPB3-203ENST00000504841 MROH7Q68CQ1 1323 aa8.3□□□□□ -1.08
NPIPB3-203ENST00000504841 TCRBV5S4A2TA0A5A2 114 aa8.3□□□□□ -1.08
NPIPB3-203ENST00000504841 SNAI1O95863 264 aaPredicted RBP8.3□□□□□ -1.08
NPIPB3-203ENST00000504841 COPB2P35606 906 aa8.3□□□□□ -1.08
NPIPB3-203ENST00000504841 CDK8P49336 464 aa8.3□□□□□ -1.08
NPIPB3-203ENST00000504841 MRPS5P82675 430 aaKnown RBP8.3□□□□□ -1.08
NPIPB3-203ENST00000504841 CEP85Q6P2H3 762 aa8.3□□□□□ -1.08
NPIPB3-203ENST00000504841 PSRC1Q6PGN9 363 aaPredicted RBP8.3□□□□□ -1.08
NPIPB3-203ENST00000504841 TMED8Q6PL24 325 aaPredicted RBP8.3□□□□□ -1.08
NPIPB3-203ENST00000504841 ZNF365Q70YC5 407 aa8.3□□□□□ -1.08
NPIPB3-203ENST00000504841 C16orf59Q7L2K0 433 aa8.3□□□□□ -1.08
NPIPB3-203ENST00000504841 TMEM199Q8N511 208 aa8.3□□□□□ -1.08
NPIPB3-203ENST00000504841 KLHDC9Q8NEP7 349 aa8.3□□□□□ -1.08
NPIPB3-203ENST00000504841 DDRGK1Q96HY6 314 aa8.3□□□□□ -1.08
NPIPB3-203ENST00000504841 CCDC17Q96LX7 622 aa8.3□□□□□ -1.08
NPIPB3-203ENST00000504841 NECAB3Q96P71 396 aaPredicted RBP8.3□□□□□ -1.08
NPIPB3-203ENST00000504841 TEX13BQ9BXU2 312 aa8.3□□□□□ -1.08
NPIPB3-203ENST00000504841 SPC25Q9HBM1 224 aa8.3□□□□□ -1.08
NPIPB3-203ENST00000504841 MSRAQ9UJ68 235 aa8.3□□□□□ -1.08
NPIPB3-203ENST00000504841 DIS3Q9Y2L1 958 aaKnown RBP8.3□□□□□ -1.08
NPIPB3-203ENST00000504841 CTDP1Q9Y5B0 961 aaPredicted RBP8.3□□□□□ -1.08
NPIPB3-203ENST00000504841 A0A0U1RQG5 324 aaPredicted RBP8.29□□□□□ -1.08
NPIPB3-203ENST00000504841 USP17L12C9JPN9 530 aa8.29□□□□□ -1.08
NPIPB3-203ENST00000504841 USP17L21D6R901 530 aa8.29□□□□□ -1.08
NPIPB3-203ENST00000504841 TLR3O15455 904 aaKnown RBP8.29□□□□□ -1.08
NPIPB3-203ENST00000504841 ADCY6O43306 1168 aa8.29□□□□□ -1.08
NPIPB3-203ENST00000504841 DUSP11O75319 330 aaKnown RBP8.29□□□□□ -1.08
NPIPB3-203ENST00000504841 CHGBP05060 677 aa8.29□□□□□ -1.08
NPIPB3-203ENST00000504841 ASGR1P07306 291 aa8.29□□□□□ -1.08
NPIPB3-203ENST00000504841 IFIT2P09913 472 aaKnown RBP8.29□□□□□ -1.08
NPIPB3-203ENST00000504841 RLBP1P12271 317 aa8.29□□□□□ -1.08
NPIPB3-203ENST00000504841 CYP2C18P33260 490 aa8.29□□□□□ -1.08
NPIPB3-203ENST00000504841 BEX3Q00994 111 aa8.29□□□□□ -1.08
NPIPB3-203ENST00000504841 SKIV2LQ15477 1246 aaKnown RBP8.29□□□□□ -1.08
NPIPB3-203ENST00000504841 RAB30Q15771 203 aa8.29□□□□□ -1.08
NPIPB3-203ENST00000504841 GNASQ5JWF2 1037 aa8.29□□□□□ -1.08
NPIPB3-203ENST00000504841 AKNAD1Q5T1N1 836 aa8.29□□□□□ -1.08
NPIPB3-203ENST00000504841 NOL8Q76FK4 1167 aaKnown RBP8.29□□□□□ -1.08
NPIPB3-203ENST00000504841 FAM126BQ8IXS8 530 aa8.29□□□□□ -1.08
NPIPB3-203ENST00000504841 RASEFQ8IZ41 740 aa8.29□□□□□ -1.08
NPIPB3-203ENST00000504841 PCSK9Q8NBP7 692 aaKnown RBP8.29□□□□□ -1.08
NPIPB3-203ENST00000504841 REPS2Q8NFH8 660 aa8.29□□□□□ -1.08
NPIPB3-203ENST00000504841 RHPN1Q8TCX5 695 aa8.29□□□□□ -1.08
NPIPB3-203ENST00000504841 FAM122AQ96E09 287 aa8.29□□□□□ -1.08
NPIPB3-203ENST00000504841 SLF1Q9BQI6 1058 aa8.29□□□□□ -1.08
NPIPB3-203ENST00000504841 BOLA2Q9H3K6 86 aa8.29□□□□□ -1.08
NPIPB3-203ENST00000504841 KANSL2Q9H9L4 492 aa8.29□□□□□ -1.08
NPIPB3-203ENST00000504841 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.29□□□□□ -1.08
NPIPB3-203ENST00000504841 CXXC1Q9P0U4 656 aaPredicted RBP8.29□□□□□ -1.08
NPIPB3-203ENST00000504841 ISY1Q9ULR0 285 aaKnown RBP8.29□□□□□ -1.08
NPIPB3-203ENST00000504841 ADAMTS5Q9UNA0 930 aa8.29□□□□□ -1.08
NPIPB3-203ENST00000504841 RIPK3Q9Y572 518 aa8.29□□□□□ -1.08
NPIPB3-203ENST00000504841 TTC28Q96AY4 2481 aa8.29□□□□□ -1.08
NPIPB3-203ENST00000504841 ELP1O95163 1332 aa8.29□□□□□ -1.08
NPIPB3-203ENST00000504841 SYNGAP1Q96PV0 1343 aa8.29□□□□□ -1.08
NPIPB3-203ENST00000504841 ARVCFO00192 962 aa8.28□□□□□ -1.08
NPIPB3-203ENST00000504841 CST5P28325 142 aaPredicted RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms