RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 SLFN13Q68D06 897 aa15.23■□□□□ 0.03
LMNA-220ENST00000504687 TYW1BQ6NUM6 668 aa15.23■□□□□ 0.03
LMNA-220ENST00000504687 KRI1Q8N9T8 703 aaKnown RBP15.23■□□□□ 0.03
LMNA-220ENST00000504687 FSIP1Q8NA03 581 aa15.23■□□□□ 0.03
LMNA-220ENST00000504687 TMEM39BQ9GZU3 492 aa15.23■□□□□ 0.03
LMNA-220ENST00000504687 GLT8D2Q9H1C3 349 aa15.23■□□□□ 0.03
LMNA-220ENST00000504687 SH2D4AQ9H788 454 aa15.23■□□□□ 0.03
LMNA-220ENST00000504687 JMJD4Q9H9V9 463 aa15.23■□□□□ 0.03
LMNA-220ENST00000504687 ARHGEF10LQ9HCE6 1279 aa15.23■□□□□ 0.03
LMNA-220ENST00000504687 C6orf50Q9HD87 102 aa15.23■□□□□ 0.03
LMNA-220ENST00000504687 GPRC5DQ9NZD1 345 aa15.23■□□□□ 0.03
LMNA-220ENST00000504687 ZBTB21Q9ULJ3 1066 aa15.23■□□□□ 0.03
LMNA-220ENST00000504687 F5H6K3 240 aa15.22■□□□□ 0.03
LMNA-220ENST00000504687 ASNSP08243 561 aa15.22■□□□□ 0.03
LMNA-220ENST00000504687 JAG1P78504 1218 aa15.22■□□□□ 0.03
LMNA-220ENST00000504687 KLRC3Q07444 240 aa15.22■□□□□ 0.03
LMNA-220ENST00000504687 RASA3Q14644 834 aa15.22■□□□□ 0.03
LMNA-220ENST00000504687 KIF4BQ2VIQ3 1234 aa15.22■□□□□ 0.03
LMNA-220ENST00000504687 KRT25Q7Z3Z0 450 aa15.22■□□□□ 0.03
LMNA-220ENST00000504687 HEATR3Q7Z4Q2 680 aa15.22■□□□□ 0.03
LMNA-220ENST00000504687 CLEC10AQ8IUN9 316 aa15.22■□□□□ 0.03
LMNA-220ENST00000504687 APOBEC3FQ8IUX4 373 aaKnown RBP15.22■□□□□ 0.03
LMNA-220ENST00000504687 ADGRF4Q8IZF3 695 aa15.22■□□□□ 0.03
LMNA-220ENST00000504687 FERMT2Q96AC1 680 aa15.22■□□□□ 0.03
LMNA-220ENST00000504687 PIGSQ96S52 555 aa15.22■□□□□ 0.03
LMNA-220ENST00000504687 TSPY26PQ9H489 355 aa15.22■□□□□ 0.03
LMNA-220ENST00000504687 GOLPH3LQ9H4A5 285 aa15.22■□□□□ 0.03
LMNA-220ENST00000504687 FBXO2Q9UK22 296 aaPredicted RBP15.22■□□□□ 0.03
LMNA-220ENST00000504687 PCDHB6Q9Y5E3 794 aa15.22■□□□□ 0.03
LMNA-220ENST00000504687 PITPNM2Q9BZ72 1349 aa15.21■□□□□ 0.03
LMNA-220ENST00000504687 DOCK1Q14185 1865 aa15.21■□□□□ 0.03
LMNA-220ENST00000504687 SHTN1A0MZ66 631 aa15.21■□□□□ 0.03
LMNA-220ENST00000504687 PHF20L1A8MW92 1017 aa15.21■□□□□ 0.03
LMNA-220ENST00000504687 ZBTB5O15062 677 aa15.21■□□□□ 0.03
LMNA-220ENST00000504687 KINO60870 393 aaKnown RBP15.21■□□□□ 0.03
LMNA-220ENST00000504687 GDF11O95390 407 aa15.21■□□□□ 0.03
LMNA-220ENST00000504687 CAVIN2O95810 425 aa15.21■□□□□ 0.03
LMNA-220ENST00000504687 SLURP2P0DP57 97 aa15.21■□□□□ 0.03
LMNA-220ENST00000504687 XRCC6P12956 609 aaKnown RBP eCLIP15.21■□□□□ 0.03
LMNA-220ENST00000504687 SLC1A4P43007 532 aa15.21■□□□□ 0.03
LMNA-220ENST00000504687 ATP2C1P98194 919 aaPredicted RBP15.21■□□□□ 0.03
LMNA-220ENST00000504687 TRAF1Q13077 416 aa15.21■□□□□ 0.03
LMNA-220ENST00000504687 EARS2Q5JPH6 523 aaKnown RBP15.21■□□□□ 0.03
LMNA-220ENST00000504687 ARL6IP4Q66PJ3 421 aaKnown RBP15.21■□□□□ 0.03
LMNA-220ENST00000504687 MCTP2Q6DN12 878 aa15.21■□□□□ 0.03
LMNA-220ENST00000504687 ARHGAP27Q6ZUM4 889 aa15.21■□□□□ 0.03
LMNA-220ENST00000504687 RASGRP2Q7LDG7 609 aa15.21■□□□□ 0.03
LMNA-220ENST00000504687 GPKOWQ92917 476 aaPredicted RBP eCLIP15.21■□□□□ 0.031e-9■■■■□ 23.2
LMNA-220ENST00000504687 TNMDQ9H2S6 317 aa15.21■□□□□ 0.03
LMNA-220ENST00000504687 PCDHA6Q9UN73 950 aa15.21■□□□□ 0.03
LMNA-220ENST00000504687 PCDHA8Q9Y5H6 950 aa15.21■□□□□ 0.03
LMNA-220ENST00000504687 FRMPD2Q68DX3 1309 aaPredicted RBP15.2■□□□□ 0.02
LMNA-220ENST00000504687 LAD1O00515 517 aa15.2■□□□□ 0.02
LMNA-220ENST00000504687 NDUFB10O96000 172 aa15.2■□□□□ 0.02
LMNA-220ENST00000504687 NAPAP54920 295 aa15.2■□□□□ 0.02
LMNA-220ENST00000504687 CCDC96Q2M329 555 aa15.2■□□□□ 0.02
LMNA-220ENST00000504687 UVSSAQ2YD98 709 aa15.2■□□□□ 0.02
LMNA-220ENST00000504687 TTC38Q5R3I4 469 aa15.2■□□□□ 0.02
LMNA-220ENST00000504687 SHC4Q6S5L8 630 aa15.2■□□□□ 0.02
LMNA-220ENST00000504687 UBA5Q9GZZ9 404 aa15.2■□□□□ 0.02
LMNA-220ENST00000504687 GOPCQ9HD26 462 aa15.2■□□□□ 0.02
LMNA-220ENST00000504687 GJA3Q9Y6H8 435 aa15.2■□□□□ 0.02
LMNA-220ENST00000504687 ZC3H4Q9UPT8 1303 aaKnown RBP15.19■□□□□ 0.02
LMNA-220ENST00000504687 A0A1W2PRG0 241 aa15.19■□□□□ 0.02
LMNA-220ENST00000504687 SMCO2A6NFE2 343 aa15.19■□□□□ 0.02
LMNA-220ENST00000504687 CTNND1O60716 968 aaKnown RBP15.19■□□□□ 0.02
LMNA-220ENST00000504687 EGFRP00533 1210 aa15.19■□□□□ 0.02
LMNA-220ENST00000504687 CCDC192P0DO97 292 aa15.19■□□□□ 0.02
LMNA-220ENST00000504687 BMP3P12645 472 aa15.19■□□□□ 0.02
LMNA-220ENST00000504687 NDUFA8P51970 172 aa15.19■□□□□ 0.02
LMNA-220ENST00000504687 SHROOM1Q2M3G4 852 aaPredicted RBP15.19■□□□□ 0.02
LMNA-220ENST00000504687 DCAF15Q66K64 600 aa15.19■□□□□ 0.02
LMNA-220ENST00000504687 SAMD7Q7Z3H4 446 aa15.19■□□□□ 0.02
LMNA-220ENST00000504687 GPCPD1Q9NPB8 672 aa15.19■□□□□ 0.02
LMNA-220ENST00000504687 RIC8AQ9NPQ8 531 aa15.19■□□□□ 0.02
LMNA-220ENST00000504687 HACL1Q9UJ83 578 aa15.19■□□□□ 0.02
LMNA-220ENST00000504687 ZNF112Q9UJU3 913 aa15.19■□□□□ 0.02
LMNA-220ENST00000504687 CCDC194A0A1B0GVG4 234 aa15.18■□□□□ 0.02
LMNA-220ENST00000504687 FAM205CA6NFA0 338 aa15.18■□□□□ 0.02
LMNA-220ENST00000504687 PFKFB1P16118 471 aa15.18■□□□□ 0.02
LMNA-220ENST00000504687 MARCKSP29966 332 aaPredicted RBP15.18■□□□□ 0.02
LMNA-220ENST00000504687 CLK2P49760 499 aaKnown RBP15.18■□□□□ 0.02
LMNA-220ENST00000504687 ATP2B2Q01814 1243 aa15.18■□□□□ 0.02
LMNA-220ENST00000504687 TTBK2Q6IQ55 1244 aa15.18■□□□□ 0.02
LMNA-220ENST00000504687 PIK3AP1Q6ZUJ8 805 aa15.18■□□□□ 0.02
LMNA-220ENST00000504687 RBSNQ9H1K0 784 aa15.18■□□□□ 0.02
LMNA-220ENST00000504687 DEFB129Q9H1M3 183 aa15.18■□□□□ 0.02
LMNA-220ENST00000504687 CPVLQ9H3G5 476 aa15.18■□□□□ 0.02
LMNA-220ENST00000504687 VCPKMTQ9H867 229 aa15.18■□□□□ 0.02
LMNA-220ENST00000504687 MTMR7Q9Y216 660 aa15.18■□□□□ 0.02
LMNA-220ENST00000504687 A0A1B0GVL5 298 aa15.17■□□□□ 0.02
LMNA-220ENST00000504687 DCAF8L1A6NGE4 600 aa15.17■□□□□ 0.02
LMNA-220ENST00000504687 GRIN3BO60391 1043 aa15.17■□□□□ 0.02
LMNA-220ENST00000504687 ZNF202O95125 648 aa15.17■□□□□ 0.02
LMNA-220ENST00000504687 PRPHP41219 470 aa15.17■□□□□ 0.02
LMNA-220ENST00000504687 TBC1D10BQ4KMP7 808 aaPredicted RBP15.17■□□□□ 0.02
LMNA-220ENST00000504687 KCTD1Q719H9 257 aa15.17■□□□□ 0.02
LMNA-220ENST00000504687 HOMER1Q86YM7 354 aa15.17■□□□□ 0.02
LMNA-220ENST00000504687 CDAN1Q8IWY9 1227 aa15.17■□□□□ 0.02
LMNA-220ENST00000504687 REXO1Q8N1G1 1221 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms