RNA–Protein interactions for RNA: ENST00000504677.5

POLR2J3-210, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-210ENST00000504677 PIBF1Q8WXW3 757 aa13.72□□□□□ -0.21
POLR2J3-210ENST00000504677 LPAR1Q92633 364 aa13.72□□□□□ -0.21
POLR2J3-210ENST00000504677 PIGSQ96S52 555 aa13.72□□□□□ -0.21
POLR2J3-210ENST00000504677 GLT8D2Q9H1C3 349 aa13.72□□□□□ -0.21
POLR2J3-210ENST00000504677 JMJD4Q9H9V9 463 aa13.72□□□□□ -0.21
POLR2J3-210ENST00000504677 AS3MTQ9HBK9 375 aa13.72□□□□□ -0.21
POLR2J3-210ENST00000504677 C6orf50Q9HD87 102 aa13.72□□□□□ -0.21
POLR2J3-210ENST00000504677 PICK1Q9NRD5 415 aa13.72□□□□□ -0.21
POLR2J3-210ENST00000504677 TFIP11Q9UBB9 837 aaKnown RBP13.72□□□□□ -0.21
POLR2J3-210ENST00000504677 CEP131Q9UPN4 1083 aa13.72□□□□□ -0.21
POLR2J3-210ENST00000504677 BAZ2BQ9UIF8 2168 aaKnown RBP13.72□□□□□ -0.21
POLR2J3-210ENST00000504677 SSC5DA1L4H1 1573 aa13.71□□□□□ -0.21
POLR2J3-210ENST00000504677 A0A1W2PRG0 241 aa13.71□□□□□ -0.21
POLR2J3-210ENST00000504677 USP14P54578 494 aa13.71□□□□□ -0.21
POLR2J3-210ENST00000504677 NOL9Q5SY16 702 aaKnown RBP13.71□□□□□ -0.21
POLR2J3-210ENST00000504677 PNMA8AQ86V59 439 aaPredicted RBP13.71□□□□□ -0.21
POLR2J3-210ENST00000504677 TEX2Q8IWB9 1127 aa13.71□□□□□ -0.21
POLR2J3-210ENST00000504677 BLIDQ8IZY5 108 aa13.71□□□□□ -0.21
POLR2J3-210ENST00000504677 GPKOWQ92917 476 aaPredicted RBP eCLIP13.71□□□□□ -0.21
POLR2J3-210ENST00000504677 SHISA4Q96DD7 197 aa13.71□□□□□ -0.21
POLR2J3-210ENST00000504677 WRNIP1Q96S55 665 aa13.71□□□□□ -0.21
POLR2J3-210ENST00000504677 FEZ1Q99689 392 aa13.71□□□□□ -0.21
POLR2J3-210ENST00000504677 UBA5Q9GZZ9 404 aa13.71□□□□□ -0.21
POLR2J3-210ENST00000504677 KIAA1683Q9H0B3 1180 aa13.71□□□□□ -0.21
POLR2J3-210ENST00000504677 ZMYND12Q9H0C1 365 aa13.71□□□□□ -0.21
POLR2J3-210ENST00000504677 MORC2Q9Y6X9 1032 aaPredicted RBP13.71□□□□□ -0.21
POLR2J3-210ENST00000504677 PAPPA2Q9BXP8 1791 aa13.71□□□□□ -0.22
POLR2J3-210ENST00000504677 ECE1P42892 770 aa13.7□□□□□ -0.22
POLR2J3-210ENST00000504677 STAT2P52630 851 aa13.7□□□□□ -0.22
POLR2J3-210ENST00000504677 IKQ13123 557 aaPredicted RBP13.7□□□□□ -0.22
POLR2J3-210ENST00000504677 NR5A1Q13285 461 aa13.7□□□□□ -0.22
POLR2J3-210ENST00000504677 SF3A1Q15459 793 aaKnown RBP13.7□□□□□ -0.22
POLR2J3-210ENST00000504677 NPY5RQ15761 445 aa13.7□□□□□ -0.22
POLR2J3-210ENST00000504677 SYDE2Q5VT97 1194 aa13.7□□□□□ -0.22
POLR2J3-210ENST00000504677 TTBK2Q6IQ55 1244 aa13.7□□□□□ -0.22
POLR2J3-210ENST00000504677 FAM160B2Q86V87 743 aa13.7□□□□□ -0.22
POLR2J3-210ENST00000504677 LINC00301Q8NCQ3 95 aa13.7□□□□□ -0.22
POLR2J3-210ENST00000504677 GPT2Q8TD30 523 aa13.7□□□□□ -0.22
POLR2J3-210ENST00000504677 ACER1Q8TDN7 264 aa13.7□□□□□ -0.22
POLR2J3-210ENST00000504677 CHURC1Q8WUH1 139 aa13.7□□□□□ -0.22
POLR2J3-210ENST00000504677 TNFRSF25Q93038 417 aa13.7□□□□□ -0.22
POLR2J3-210ENST00000504677 WDR18Q9BV38 432 aa13.7□□□□□ -0.22
POLR2J3-210ENST00000504677 CPVLQ9H3G5 476 aa13.7□□□□□ -0.22
POLR2J3-210ENST00000504677 VAT1LQ9HCJ6 419 aa13.7□□□□□ -0.22
POLR2J3-210ENST00000504677 SCAF8Q9UPN6 1271 aaKnown RBP13.7□□□□□ -0.22
POLR2J3-210ENST00000504677 POLR2AP24928 1970 aaKnown RBP13.69□□□□□ -0.22
POLR2J3-210ENST00000504677 TMEM232C9JQI7 657 aa13.69□□□□□ -0.22
POLR2J3-210ENST00000504677 WDR46O15213 610 aaKnown RBP13.69□□□□□ -0.22
POLR2J3-210ENST00000504677 SPTLC2O15270 562 aa13.69□□□□□ -0.22
POLR2J3-210ENST00000504677 PPP1R12BO60237 982 aaPredicted RBP13.69□□□□□ -0.22
POLR2J3-210ENST00000504677 PPP6R2O75170 966 aa13.69□□□□□ -0.22
POLR2J3-210ENST00000504677 GADD45BO75293 160 aaPredicted RBP13.69□□□□□ -0.22
POLR2J3-210ENST00000504677 NF2P35240 595 aa13.69□□□□□ -0.22
POLR2J3-210ENST00000504677 CEBPZQ03701 1054 aaKnown RBP13.69□□□□□ -0.22
POLR2J3-210ENST00000504677 SLC39A14Q15043 492 aa13.69□□□□□ -0.22
POLR2J3-210ENST00000504677 CDC37Q16543 378 aaPredicted RBP13.69□□□□□ -0.22
POLR2J3-210ENST00000504677 KRT26Q7Z3Y9 468 aa13.69□□□□□ -0.22
POLR2J3-210ENST00000504677 KRT25Q7Z3Z0 450 aa13.69□□□□□ -0.22
POLR2J3-210ENST00000504677 OXER1Q8TDS5 423 aa13.69□□□□□ -0.22
POLR2J3-210ENST00000504677 KLRG1Q96E93 195 aa13.69□□□□□ -0.22
POLR2J3-210ENST00000504677 TAF1DQ9H5J8 278 aaPredicted RBP13.69□□□□□ -0.22
POLR2J3-210ENST00000504677 FEM1BQ9UK73 627 aa13.69□□□□□ -0.22
POLR2J3-210ENST00000504677 CCDC194A0A1B0GVG4 234 aa13.68□□□□□ -0.22
POLR2J3-210ENST00000504677 A0A1W2PQ27 194 aa13.68□□□□□ -0.22
POLR2J3-210ENST00000504677 A0A1W2PQ64 194 aa13.68□□□□□ -0.22
POLR2J3-210ENST00000504677 A0A1W2PQD8 194 aa13.68□□□□□ -0.22
POLR2J3-210ENST00000504677 TRIM75PA6NK02 468 aa13.68□□□□□ -0.22
POLR2J3-210ENST00000504677 USP17L10C9JJH3 530 aa13.68□□□□□ -0.22
POLR2J3-210ENST00000504677 VEGFAP15692 232 aaPredicted RBP13.68□□□□□ -0.22
POLR2J3-210ENST00000504677 INPP5BP32019 993 aa13.68□□□□□ -0.22
POLR2J3-210ENST00000504677 SLC16A2P36021 539 aa13.68□□□□□ -0.22
POLR2J3-210ENST00000504677 ME1P48163 572 aa13.68□□□□□ -0.22
POLR2J3-210ENST00000504677 ADCY7P51828 1080 aa13.68□□□□□ -0.22
POLR2J3-210ENST00000504677 TYW1BQ6NUM6 668 aa13.68□□□□□ -0.22
POLR2J3-210ENST00000504677 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.68□□□□□ -0.22
POLR2J3-210ENST00000504677 FTOQ9C0B1 505 aaKnown RBP eCLIP13.68□□□□□ -0.22
POLR2J3-210ENST00000504677 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.68□□□□□ -0.22
POLR2J3-210ENST00000504677 CLIC4Q9Y696 253 aa13.68□□□□□ -0.22
POLR2J3-210ENST00000504677 OTOFQ9HC10 1997 aa13.67□□□□□ -0.22
POLR2J3-210ENST00000504677 PHIPQ8WWQ0 1821 aa13.67□□□□□ -0.22
POLR2J3-210ENST00000504677 SMCO2A6NFE2 343 aa13.67□□□□□ -0.22
POLR2J3-210ENST00000504677 DCAF8L1A6NGE4 600 aa13.67□□□□□ -0.22
POLR2J3-210ENST00000504677 M0R2N6 131 aa13.67□□□□□ -0.22
POLR2J3-210ENST00000504677 IREB2P48200 963 aaKnown RBP13.67□□□□□ -0.22
POLR2J3-210ENST00000504677 QRICH1Q2TAL8 776 aa13.67□□□□□ -0.22
POLR2J3-210ENST00000504677 FAM83BQ5T0W9 1011 aa13.67□□□□□ -0.22
POLR2J3-210ENST00000504677 ADALQ6DHV7 355 aa13.67□□□□□ -0.22
POLR2J3-210ENST00000504677 MCTP2Q6DN12 878 aa13.67□□□□□ -0.22
POLR2J3-210ENST00000504677 CAVIN1Q6NZI2 390 aaKnown RBP13.67□□□□□ -0.22
POLR2J3-210ENST00000504677 SPICE1Q8N0Z3 855 aa13.67□□□□□ -0.22
POLR2J3-210ENST00000504677 REXO1Q8N1G1 1221 aaKnown RBP13.67□□□□□ -0.22
POLR2J3-210ENST00000504677 CUL5Q93034 780 aa13.67□□□□□ -0.22
POLR2J3-210ENST00000504677 NUP88Q99567 741 aaPredicted RBP13.67□□□□□ -0.22
POLR2J3-210ENST00000504677 AMNQ9BXJ7 453 aa13.67□□□□□ -0.22
POLR2J3-210ENST00000504677 DDX19AQ9NUU7 478 aaKnown RBP13.67□□□□□ -0.22
POLR2J3-210ENST00000504677 PNMA2Q9UL42 364 aa13.67□□□□□ -0.22
POLR2J3-210ENST00000504677 C19orf81C9J6K1 198 aa13.66□□□□□ -0.22
POLR2J3-210ENST00000504677 ADM5C9JUS6 153 aa13.66□□□□□ -0.22
POLR2J3-210ENST00000504677 LETM1O95202 739 aaPredicted RBP13.66□□□□□ -0.22
POLR2J3-210ENST00000504677 PTPRAP18433 802 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms