RNA–Protein interactions for RNA: ENST00000504543.1

USP17L28-201, Transcript of ubiquitin specific peptidase 17-like family member 28, humanhuman

APPRIS P1 BASIC

Gene USP17L28, Length 1,593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L28-201ENST00000504543 PRDM1O75626 825 aa11.83□□□□□ -0.52
USP17L28-201ENST00000504543 METAP2P50579 478 aaKnown RBP eCLIP11.83□□□□□ -0.52
USP17L28-201ENST00000504543 KRT85P78386 507 aa11.83□□□□□ -0.52
USP17L28-201ENST00000504543 USP17L24Q0WX57 530 aa11.83□□□□□ -0.52
USP17L28-201ENST00000504543 RESTQ13127 1097 aa11.83□□□□□ -0.52
USP17L28-201ENST00000504543 CRHR2Q13324 411 aa11.83□□□□□ -0.52
USP17L28-201ENST00000504543 L1TD1Q5T7N2 865 aaKnown RBP11.83□□□□□ -0.52
USP17L28-201ENST00000504543 CPLX2Q6PUV4 134 aaKnown RBP11.83□□□□□ -0.52
USP17L28-201ENST00000504543 C17orf99Q6UX52 265 aa11.83□□□□□ -0.52
USP17L28-201ENST00000504543 GADL1Q6ZQY3 521 aa11.83□□□□□ -0.52
USP17L28-201ENST00000504543 DGKHQ86XP1 1220 aa11.83□□□□□ -0.52
USP17L28-201ENST00000504543 CEP95Q96GE4 821 aa11.83□□□□□ -0.52
USP17L28-201ENST00000504543 ZSWIM5Q9P217 1185 aa11.83□□□□□ -0.52
USP17L28-201ENST00000504543 NAP1L2Q9ULW6 460 aaPredicted RBP11.83□□□□□ -0.52
USP17L28-201ENST00000504543 MYH4Q9Y623 1939 aa11.82□□□□□ -0.52
USP17L28-201ENST00000504543 ERICH2A1L162 156 aa11.82□□□□□ -0.52
USP17L28-201ENST00000504543 H3BQV1 296 aa11.82□□□□□ -0.52
USP17L28-201ENST00000504543 CPLX1O14810 134 aa11.82□□□□□ -0.52
USP17L28-201ENST00000504543 IFIT3O14879 490 aaKnown RBP11.82□□□□□ -0.52
USP17L28-201ENST00000504543 ZBTB43O43298 467 aa11.82□□□□□ -0.52
USP17L28-201ENST00000504543 RANBP6O60518 1105 aaKnown RBP11.82□□□□□ -0.52
USP17L28-201ENST00000504543 NCLP19338 710 aaKnown RBP11.82□□□□□ -0.52
USP17L28-201ENST00000504543 UBE2HP62256 183 aa11.82□□□□□ -0.52
USP17L28-201ENST00000504543 WTAPQ15007 396 aa11.82□□□□□ -0.52
USP17L28-201ENST00000504543 ARHGEF6Q15052 776 aa11.82□□□□□ -0.52
USP17L28-201ENST00000504543 IFFO2Q5TF58 517 aa11.82□□□□□ -0.52
USP17L28-201ENST00000504543 RCSD1Q6JBY9 416 aa11.82□□□□□ -0.52
USP17L28-201ENST00000504543 CATSPERGQ6ZRH7 1159 aa11.82□□□□□ -0.52
USP17L28-201ENST00000504543 NKX2-3Q8TAU0 364 aa11.82□□□□□ -0.52
USP17L28-201ENST00000504543 DDX11Q96FC9 970 aa11.82□□□□□ -0.52
USP17L28-201ENST00000504543 CHAMP1Q96JM3 812 aa11.82□□□□□ -0.52
USP17L28-201ENST00000504543 IL17RBQ9NRM6 502 aa11.82□□□□□ -0.52
USP17L28-201ENST00000504543 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.82□□□□□ -0.52
USP17L28-201ENST00000504543 CNPY2Q9Y2B0 182 aa11.82□□□□□ -0.52
USP17L28-201ENST00000504543 CCDC69A6NI79 296 aa11.81□□□□□ -0.52
USP17L28-201ENST00000504543 PLA2G6O60733 806 aa11.81□□□□□ -0.52
USP17L28-201ENST00000504543 FKTNO75072 461 aa11.81□□□□□ -0.52
USP17L28-201ENST00000504543 GNRH1P01148 92 aa11.81□□□□□ -0.52
USP17L28-201ENST00000504543 BCRP11274 1271 aa11.81□□□□□ -0.52
USP17L28-201ENST00000504543 FDPSP14324 419 aaKnown RBP11.81□□□□□ -0.52
USP17L28-201ENST00000504543 VCAM1P19320 739 aa11.81□□□□□ -0.52
USP17L28-201ENST00000504543 ZNF445P59923 1031 aa11.81□□□□□ -0.52
USP17L28-201ENST00000504543 PPP2R5BQ15173 497 aa11.81□□□□□ -0.52
USP17L28-201ENST00000504543 TREML2Q5T2D2 321 aa11.81□□□□□ -0.52
USP17L28-201ENST00000504543 ATL3Q6DD88 541 aa11.81□□□□□ -0.52
USP17L28-201ENST00000504543 IQCA1Q86XH1 822 aa11.81□□□□□ -0.52
USP17L28-201ENST00000504543 SYAP1Q96A49 352 aaPredicted RBP11.81□□□□□ -0.52
USP17L28-201ENST00000504543 UBAC1Q9BSL1 405 aa11.81□□□□□ -0.52
USP17L28-201ENST00000504543 SCAND2PQ9GZW5 306 aaPredicted RBP11.81□□□□□ -0.52
USP17L28-201ENST00000504543 ASCC2Q9H1I8 757 aaPredicted RBP11.81□□□□□ -0.52
USP17L28-201ENST00000504543 MORF4L1Q9UBU8 362 aa11.81□□□□□ -0.52
USP17L28-201ENST00000504543 SLC12A7Q9Y666 1083 aa11.81□□□□□ -0.52
USP17L28-201ENST00000504543 GOLGA6L3A6NEY3 463 aa11.8□□□□□ -0.52
USP17L28-201ENST00000504543 GOLGA8AA7E2F4 631 aa11.8□□□□□ -0.52
USP17L28-201ENST00000504543 F5H6K3 240 aa11.8□□□□□ -0.52
USP17L28-201ENST00000504543 TBC1D8O95759 1140 aa11.8□□□□□ -0.52
USP17L28-201ENST00000504543 FDX1P10109 184 aa11.8□□□□□ -0.52
USP17L28-201ENST00000504543 TOP1P11387 765 aaKnown RBP11.8□□□□□ -0.52
USP17L28-201ENST00000504543 LBX1P52954 281 aa11.8□□□□□ -0.52
USP17L28-201ENST00000504543 IRX3P78415 501 aaPredicted RBP11.8□□□□□ -0.52
USP17L28-201ENST00000504543 SP3Q02447 781 aa11.8□□□□□ -0.52
USP17L28-201ENST00000504543 DNM1Q05193 864 aaKnown RBP11.8□□□□□ -0.52
USP17L28-201ENST00000504543 KLRC3Q07444 240 aa11.8□□□□□ -0.52
USP17L28-201ENST00000504543 SEC23AQ15436 765 aa11.8□□□□□ -0.52
USP17L28-201ENST00000504543 FAM110CQ1W6H9 321 aa11.8□□□□□ -0.52
USP17L28-201ENST00000504543 FAM47AQ5JRC9 791 aa11.8□□□□□ -0.52
USP17L28-201ENST00000504543 RRP12Q5JTH9 1297 aaKnown RBP11.8□□□□□ -0.52
USP17L28-201ENST00000504543 SYNE3Q6ZMZ3 975 aa11.8□□□□□ -0.52
USP17L28-201ENST00000504543 NFXL1Q6ZNB6 911 aa11.8□□□□□ -0.52
USP17L28-201ENST00000504543 MB21D1Q8N884 522 aa11.8□□□□□ -0.52
USP17L28-201ENST00000504543 ERO1AQ96HE7 468 aa11.8□□□□□ -0.52
USP17L28-201ENST00000504543 GMCL1Q96IK5 515 aa11.8□□□□□ -0.52
USP17L28-201ENST00000504543 GZF1Q9H116 711 aaPredicted RBP11.8□□□□□ -0.52
USP17L28-201ENST00000504543 HOXC10Q9NYD6 342 aa11.8□□□□□ -0.52
USP17L28-201ENST00000504543 CLIP2Q9UDT6 1046 aa11.8□□□□□ -0.52
USP17L28-201ENST00000504543 TNKSO95271 1327 aa11.8□□□□□ -0.52
USP17L28-201ENST00000504543 RLFQ13129 1914 aa11.8□□□□□ -0.52
USP17L28-201ENST00000504543 CCDC196A0A1B0GTZ2 297 aa11.79□□□□□ -0.52
USP17L28-201ENST00000504543 FIBPO43427 364 aa11.79□□□□□ -0.52
USP17L28-201ENST00000504543 COG2Q14746 738 aa11.79□□□□□ -0.52
USP17L28-201ENST00000504543 NTRK3Q16288 839 aa11.79□□□□□ -0.52
USP17L28-201ENST00000504543 CAVIN1Q6NZI2 390 aaKnown RBP11.79□□□□□ -0.52
USP17L28-201ENST00000504543 MICU3Q86XE3 530 aa11.79□□□□□ -0.52
USP17L28-201ENST00000504543 R3HDMLQ9H3Y0 253 aa11.79□□□□□ -0.52
USP17L28-201ENST00000504543 INCENPQ9NQS7 918 aa11.79□□□□□ -0.52
USP17L28-201ENST00000504543 TOMM22Q9NS69 142 aa11.79□□□□□ -0.52
USP17L28-201ENST00000504543 ORC3Q9UBD5 711 aaPredicted RBP11.79□□□□□ -0.52
USP17L28-201ENST00000504543 ADAMTS5Q9UNA0 930 aa11.79□□□□□ -0.52
USP17L28-201ENST00000504543 PARP14Q460N5 1801 aa11.79□□□□□ -0.52
USP17L28-201ENST00000504543 IFNAR1P17181 557 aa11.79□□□□□ -0.52
USP17L28-201ENST00000504543 HERVK_113P62684 666 aa11.79□□□□□ -0.52
USP17L28-201ENST00000504543 PKN2Q16513 984 aaKnown RBP11.79□□□□□ -0.52
USP17L28-201ENST00000504543 ZSCAN23Q3MJ62 389 aa11.79□□□□□ -0.52
USP17L28-201ENST00000504543 FERMT3Q86UX7 667 aa11.79□□□□□ -0.52
USP17L28-201ENST00000504543 ZNF654Q8IZM8 581 aa11.79□□□□□ -0.52
USP17L28-201ENST00000504543 STK11IPQ8N1F8 1099 aa11.79□□□□□ -0.52
USP17L28-201ENST00000504543 FBXO18Q8NFZ0 1043 aa11.79□□□□□ -0.52
USP17L28-201ENST00000504543 SMCR8Q8TEV9 937 aaPredicted RBP11.79□□□□□ -0.52
USP17L28-201ENST00000504543 ZNF296Q8WUU4 475 aaPredicted RBP11.79□□□□□ -0.52
USP17L28-201ENST00000504543 ZSCAN10Q96SZ4 725 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms