RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 ZBTB47Q9UFB7 747 aaPredicted RBP16.63■□□□□ 0.25
PDLIM7-211ENST00000504318 CCDC171Q6TFL3 1326 aa16.63■□□□□ 0.25
PDLIM7-211ENST00000504318 LCTP09848 1927 aa16.62■□□□□ 0.25
PDLIM7-211ENST00000504318 PRPF38AQ8NAV1 312 aaKnown RBP16.62■□□□□ 0.25
PDLIM7-211ENST00000504318 GMCL1Q96IK5 515 aa16.62■□□□□ 0.25
PDLIM7-211ENST00000504318 IL25Q9H293 177 aa16.62■□□□□ 0.25
PDLIM7-211ENST00000504318 CWC22Q9HCG8 908 aaKnown RBP16.62■□□□□ 0.25
PDLIM7-211ENST00000504318 DDX20Q9UHI6 824 aaKnown RBP16.62■□□□□ 0.25
PDLIM7-211ENST00000504318 MCM3APO60318 1980 aa16.61■□□□□ 0.25
PDLIM7-211ENST00000504318 DNAJC25-GNG10A0A024R161 153 aa16.61■□□□□ 0.25
PDLIM7-211ENST00000504318 PGK2P07205 417 aa16.61■□□□□ 0.25
PDLIM7-211ENST00000504318 SLC3A2P08195 630 aaKnown RBP16.61■□□□□ 0.25
PDLIM7-211ENST00000504318 FCER1AP12319 257 aa16.61■□□□□ 0.25
PDLIM7-211ENST00000504318 SLFN13Q68D06 897 aa16.61■□□□□ 0.25
PDLIM7-211ENST00000504318 SAMD1Q6SPF0 538 aaPredicted RBP16.61■□□□□ 0.25
PDLIM7-211ENST00000504318 DPP9Q86TI2 863 aa16.61■□□□□ 0.25
PDLIM7-211ENST00000504318 TBC1D10CQ8IV04 446 aa16.61■□□□□ 0.25
PDLIM7-211ENST00000504318 FGD4Q96M96 766 aa16.61■□□□□ 0.25
PDLIM7-211ENST00000504318 TEX13BQ9BXU2 312 aa16.61■□□□□ 0.25
PDLIM7-211ENST00000504318 C11orf49Q9H6J7 331 aa16.61■□□□□ 0.25
PDLIM7-211ENST00000504318 FEM1BQ9UK73 627 aa16.61■□□□□ 0.25
PDLIM7-211ENST00000504318 ZNF536O15090 1300 aa16.61■□□□□ 0.25
PDLIM7-211ENST00000504318 TRIM6-TRIM34B2RNG4 842 aa16.6■□□□□ 0.25
PDLIM7-211ENST00000504318 PLA2G6O60733 806 aa16.6■□□□□ 0.25
PDLIM7-211ENST00000504318 GSPT1P15170 499 aaKnown RBP16.6■□□□□ 0.25
PDLIM7-211ENST00000504318 FXR1P51114 621 aaKnown RBP eCLIP16.6■□□□□ 0.25
PDLIM7-211ENST00000504318 RILPL2Q969X0 211 aa16.6■□□□□ 0.25
PDLIM7-211ENST00000504318 MMP19Q99542 508 aa16.6■□□□□ 0.25
PDLIM7-211ENST00000504318 RBM27Q9P2N5 1060 aaKnown RBP16.6■□□□□ 0.25
PDLIM7-211ENST00000504318 DIS3Q9Y2L1 958 aaKnown RBP16.6■□□□□ 0.25
PDLIM7-211ENST00000504318 RAD21O60216 631 aa16.59■□□□□ 0.25
PDLIM7-211ENST00000504318 BMP3P12645 472 aa16.59■□□□□ 0.25
PDLIM7-211ENST00000504318 COPB2P35606 906 aa16.59■□□□□ 0.25
PDLIM7-211ENST00000504318 PRAMEF19Q5SWL8 479 aa16.59■□□□□ 0.25
PDLIM7-211ENST00000504318 SNRNP48Q6IEG0 339 aaKnown RBP16.59■□□□□ 0.25
PDLIM7-211ENST00000504318 RCSD1Q6JBY9 416 aa16.59■□□□□ 0.25
PDLIM7-211ENST00000504318 CHRDL2Q6WN34 429 aa16.59■□□□□ 0.25
PDLIM7-211ENST00000504318 TCP11L1Q9NUJ3 509 aa16.59■□□□□ 0.25
PDLIM7-211ENST00000504318 TSPY2A6NKD2 308 aa16.58■□□□□ 0.24
PDLIM7-211ENST00000504318 SEPT4O43236 478 aa16.58■□□□□ 0.24
PDLIM7-211ENST00000504318 EVI5O60447 810 aa16.58■□□□□ 0.24
PDLIM7-211ENST00000504318 TAL1P17542 331 aaPredicted RBP16.58■□□□□ 0.24
PDLIM7-211ENST00000504318 OAZ1P54368 228 aa16.58■□□□□ 0.24
PDLIM7-211ENST00000504318 LRRC26Q2I0M4 334 aa16.58■□□□□ 0.24
PDLIM7-211ENST00000504318 STAG1Q8WVM7 1258 aa16.58■□□□□ 0.24
PDLIM7-211ENST00000504318 KIFC2Q96AC6 838 aa16.58■□□□□ 0.24
PDLIM7-211ENST00000504318 RAVER2Q9HCJ3 691 aaKnown RBP16.58■□□□□ 0.24
PDLIM7-211ENST00000504318 PCDH10Q9P2E7 1040 aa16.58■□□□□ 0.24
PDLIM7-211ENST00000504318 LRRC37A2A6NM11 1700 aa16.58■□□□□ 0.24
PDLIM7-211ENST00000504318 NEDD4P46934 1319 aa16.57■□□□□ 0.24
PDLIM7-211ENST00000504318 TMEM232C9JQI7 657 aa16.57■□□□□ 0.24
PDLIM7-211ENST00000504318 RANBP6O60518 1105 aaKnown RBP16.57■□□□□ 0.24
PDLIM7-211ENST00000504318 MSCO60682 206 aa16.57■□□□□ 0.24
PDLIM7-211ENST00000504318 ZNF865P0CJ78 1059 aaPredicted RBP16.57■□□□□ 0.24
PDLIM7-211ENST00000504318 MCCP23508 829 aa16.57■□□□□ 0.24
PDLIM7-211ENST00000504318 HAND2P61296 217 aa16.57■□□□□ 0.24
PDLIM7-211ENST00000504318 IRX6P78412 446 aaPredicted RBP16.57■□□□□ 0.24
PDLIM7-211ENST00000504318 MAMDC4Q6UXC1 1216 aa16.57■□□□□ 0.24
PDLIM7-211ENST00000504318 TINF2Q9BSI4 451 aa16.57■□□□□ 0.24
PDLIM7-211ENST00000504318 NRBP1Q9UHY1 535 aa16.57■□□□□ 0.24
PDLIM7-211ENST00000504318 NR2E3Q9Y5X4 410 aa16.57■□□□□ 0.24
PDLIM7-211ENST00000504318 SNAI1O95863 264 aaPredicted RBP16.56■□□□□ 0.24
PDLIM7-211ENST00000504318 STAT2P52630 851 aa16.56■□□□□ 0.24
PDLIM7-211ENST00000504318 KCTD2Q14681 263 aa16.56■□□□□ 0.24
PDLIM7-211ENST00000504318 AKNAD1Q5T1N1 836 aa16.56■□□□□ 0.24
PDLIM7-211ENST00000504318 BTNL9Q6UXG8 535 aa16.56■□□□□ 0.24
PDLIM7-211ENST00000504318 KCTD1Q719H9 257 aa16.56■□□□□ 0.24
PDLIM7-211ENST00000504318 CPXCR1Q8N123 301 aa16.56■□□□□ 0.24
PDLIM7-211ENST00000504318 GDF15Q99988 308 aa16.56■□□□□ 0.24
PDLIM7-211ENST00000504318 TMEM47Q9BQJ4 181 aa16.56■□□□□ 0.24
PDLIM7-211ENST00000504318 SLC5A4Q9NY91 659 aa16.56■□□□□ 0.24
PDLIM7-211ENST00000504318 STX8Q9UNK0 236 aa16.56■□□□□ 0.24
PDLIM7-211ENST00000504318 LTBP2Q14767 1821 aa16.56■□□□□ 0.24
PDLIM7-211ENST00000504318 ASTN1O14525 1302 aa16.55■□□□□ 0.24
PDLIM7-211ENST00000504318 DNM1LO00429 736 aa16.55■□□□□ 0.24
PDLIM7-211ENST00000504318 ZBED4O75132 1171 aa16.55■□□□□ 0.24
PDLIM7-211ENST00000504318 SNHG28P0DPA3 235 aa16.55■□□□□ 0.24
PDLIM7-211ENST00000504318 FDX1P10109 184 aa16.55■□□□□ 0.24
PDLIM7-211ENST00000504318 SLC1A4P43007 532 aa16.55■□□□□ 0.24
PDLIM7-211ENST00000504318 PPP4R3BQ5MIZ7 849 aa16.55■□□□□ 0.24
PDLIM7-211ENST00000504318 TTC22Q5TAA0 569 aa16.55■□□□□ 0.24
PDLIM7-211ENST00000504318 ANO1Q5XXA6 986 aa16.55■□□□□ 0.24
PDLIM7-211ENST00000504318 CWC27Q6UX04 472 aaKnown RBP16.55■□□□□ 0.24
PDLIM7-211ENST00000504318 FAM160B2Q86V87 743 aa16.55■□□□□ 0.24
PDLIM7-211ENST00000504318 C7orf61Q8IZ16 206 aa16.55■□□□□ 0.24
PDLIM7-211ENST00000504318 KATNBL1Q9H079 304 aa16.55■□□□□ 0.24
PDLIM7-211ENST00000504318 SYNGAP1Q96PV0 1343 aa16.54■□□□□ 0.24
PDLIM7-211ENST00000504318 PCP11498 1178 aaKnown RBP16.54■□□□□ 0.24
PDLIM7-211ENST00000504318 CNGA1P29973 690 aa16.54■□□□□ 0.24
PDLIM7-211ENST00000504318 ZNF467Q7Z7K2 595 aaPredicted RBP16.54■□□□□ 0.24
PDLIM7-211ENST00000504318 MSL3Q8N5Y2 521 aaKnown RBP16.54■□□□□ 0.24
PDLIM7-211ENST00000504318 CHST13Q8NET6 341 aa16.54■□□□□ 0.24
PDLIM7-211ENST00000504318 AGBL1Q96MI9 1066 aa16.54■□□□□ 0.24
PDLIM7-211ENST00000504318 DSCC1Q9BVC3 393 aa16.54■□□□□ 0.24
PDLIM7-211ENST00000504318 PRR12Q9ULL5 1215 aa16.54■□□□□ 0.24
PDLIM7-211ENST00000504318 ADCY6O43306 1168 aa16.53■□□□□ 0.24
PDLIM7-211ENST00000504318 TOP1P11387 765 aaKnown RBP16.53■□□□□ 0.24
PDLIM7-211ENST00000504318 SNX17Q15036 470 aa16.53■□□□□ 0.24
PDLIM7-211ENST00000504318 LRRC41Q15345 812 aa16.53■□□□□ 0.24
PDLIM7-211ENST00000504318 GJC2Q5T442 439 aaPredicted RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms