RNA–Protein interactions for RNA: ENST00000504227.5

CYSTM1-202, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 5

Gene CYSTM1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-202ENST00000504227 SYDE2Q5VT97 1194 aa16.06■□□□□ 0.16
CYSTM1-202ENST00000504227 ADGRF4Q8IZF3 695 aa16.06■□□□□ 0.16
CYSTM1-202ENST00000504227 SPRYD3Q8NCJ5 442 aa16.06■□□□□ 0.16
CYSTM1-202ENST00000504227 NSUN7Q8NE18 718 aaKnown RBP16.06■□□□□ 0.16
CYSTM1-202ENST00000504227 RRP36Q96EU6 259 aaKnown RBP16.06■□□□□ 0.16
CYSTM1-202ENST00000504227 MS4A4AQ96JQ5 239 aa16.06■□□□□ 0.16
CYSTM1-202ENST00000504227 SLC26A6Q9BXS9 759 aa16.06■□□□□ 0.16
CYSTM1-202ENST00000504227 RIOX1Q9H6W3 641 aa16.06■□□□□ 0.16
CYSTM1-202ENST00000504227 FOXD4L1Q9NU39 408 aa16.06■□□□□ 0.16
CYSTM1-202ENST00000504227 AGTPBP1Q9UPW5 1226 aa16.06■□□□□ 0.16
CYSTM1-202ENST00000504227 V9GY48 417 aaPredicted RBP16.06■□□□□ 0.16
CYSTM1-202ENST00000504227 MANSC4A6NHS7 340 aaPredicted RBP16.05■□□□□ 0.16
CYSTM1-202ENST00000504227 PRPF3O43395 683 aaKnown RBP16.05■□□□□ 0.16
CYSTM1-202ENST00000504227 JAK2O60674 1132 aa16.05■□□□□ 0.16
CYSTM1-202ENST00000504227 FMNL1O95466 1100 aaPredicted RBP16.05■□□□□ 0.16
CYSTM1-202ENST00000504227 HOXA7P31268 230 aaPredicted RBP16.05■□□□□ 0.16
CYSTM1-202ENST00000504227 COG2Q14746 738 aa16.05■□□□□ 0.16
CYSTM1-202ENST00000504227 TREML2Q5T2D2 321 aa16.05■□□□□ 0.16
CYSTM1-202ENST00000504227 SAMD1Q6SPF0 538 aaPredicted RBP16.05■□□□□ 0.16
CYSTM1-202ENST00000504227 CATSPERGQ6ZRH7 1159 aa16.05■□□□□ 0.16
CYSTM1-202ENST00000504227 NBPF11Q86T75 865 aa16.05■□□□□ 0.16
CYSTM1-202ENST00000504227 PRPF38AQ8NAV1 312 aaKnown RBP16.05■□□□□ 0.16
CYSTM1-202ENST00000504227 PHKBQ93100 1093 aa16.05■□□□□ 0.16
CYSTM1-202ENST00000504227 KIFC2Q96AC6 838 aa16.05■□□□□ 0.16
CYSTM1-202ENST00000504227 SLF1Q9BQI6 1058 aa16.05■□□□□ 0.16
CYSTM1-202ENST00000504227 CPVLQ9H3G5 476 aa16.05■□□□□ 0.16
CYSTM1-202ENST00000504227 HOXC10Q9NYD6 342 aa16.05■□□□□ 0.16
CYSTM1-202ENST00000504227 RBM27Q9P2N5 1060 aaKnown RBP16.05■□□□□ 0.16
CYSTM1-202ENST00000504227 ORC3Q9UBD5 711 aaPredicted RBP16.05■□□□□ 0.16
CYSTM1-202ENST00000504227 KIF3AQ9Y496 699 aa16.05■□□□□ 0.16
CYSTM1-202ENST00000504227 BAZ2BQ9UIF8 2168 aaKnown RBP16.04■□□□□ 0.16
CYSTM1-202ENST00000504227 RASSF10A6NK89 507 aa16.04■□□□□ 0.16
CYSTM1-202ENST00000504227 PPFIA3O75145 1194 aa16.04■□□□□ 0.16
CYSTM1-202ENST00000504227 OSBPP22059 807 aa16.04■□□□□ 0.16
CYSTM1-202ENST00000504227 INHBEP58166 350 aa16.04■□□□□ 0.16
CYSTM1-202ENST00000504227 MOGSQ13724 837 aa16.04■□□□□ 0.16
CYSTM1-202ENST00000504227 SLC35G1Q2M3R5 365 aa16.04■□□□□ 0.16
CYSTM1-202ENST00000504227 FAM184AQ8NB25 1140 aa16.04■□□□□ 0.16
CYSTM1-202ENST00000504227 SMARCC2Q8TAQ2 1214 aa16.04■□□□□ 0.16
CYSTM1-202ENST00000504227 PIBF1Q8WXW3 757 aa16.04■□□□□ 0.16
CYSTM1-202ENST00000504227 BRI3BPQ8WY22 251 aa16.04■□□□□ 0.16
CYSTM1-202ENST00000504227 WASF1Q92558 559 aa16.04■□□□□ 0.16
CYSTM1-202ENST00000504227 DDX11Q96FC9 970 aa16.04■□□□□ 0.16
CYSTM1-202ENST00000504227 RNF26Q9BY78 433 aaPredicted RBP16.04■□□□□ 0.16
CYSTM1-202ENST00000504227 JMJD4Q9H9V9 463 aa16.04■□□□□ 0.16
CYSTM1-202ENST00000504227 FBXO28Q9NVF7 368 aa16.04■□□□□ 0.16
CYSTM1-202ENST00000504227 SEC63Q9UGP8 760 aaKnown RBP16.04■□□□□ 0.16
CYSTM1-202ENST00000504227 PRR12Q9ULL5 1215 aa16.04■□□□□ 0.16
CYSTM1-202ENST00000504227 CTDP1Q9Y5B0 961 aaPredicted RBP16.04■□□□□ 0.16
CYSTM1-202ENST00000504227 CNTNAP5Q8WYK1 1306 aa16.03■□□□□ 0.16
CYSTM1-202ENST00000504227 STK36Q9NRP7 1315 aa16.03■□□□□ 0.16
CYSTM1-202ENST00000504227 TESPA1A2RU30 521 aaPredicted RBP16.03■□□□□ 0.16
CYSTM1-202ENST00000504227 FAM155AB1AL88 458 aaPredicted RBP16.03■□□□□ 0.16
CYSTM1-202ENST00000504227 CYTH3O43739 400 aa16.03■□□□□ 0.16
CYSTM1-202ENST00000504227 FDX1P10109 184 aa16.03■□□□□ 0.16
CYSTM1-202ENST00000504227 IRX3P78415 501 aaPredicted RBP16.03■□□□□ 0.16
CYSTM1-202ENST00000504227 GRM1Q13255 1194 aa16.03■□□□□ 0.16
CYSTM1-202ENST00000504227 CYP4F22Q6NT55 531 aa16.03■□□□□ 0.16
CYSTM1-202ENST00000504227 GPAT2Q6NUI2 795 aa16.03■□□□□ 0.16
CYSTM1-202ENST00000504227 ANKRD23Q86SG2 305 aa16.03■□□□□ 0.16
CYSTM1-202ENST00000504227 PIGSQ96S52 555 aa16.03■□□□□ 0.16
CYSTM1-202ENST00000504227 CWC22Q9HCG8 908 aaKnown RBP16.03■□□□□ 0.16
CYSTM1-202ENST00000504227 PPP1R9AQ9ULJ8 1098 aa16.03■□□□□ 0.16
CYSTM1-202ENST00000504227 SLC45A1Q9Y2W3 748 aa16.03■□□□□ 0.16
CYSTM1-202ENST00000504227 PNMA6FA0A0J9YX94 578 aa16.02■□□□□ 0.16
CYSTM1-202ENST00000504227 hCG_1642624A0A1W2PR95 340 aa16.02■□□□□ 0.16
CYSTM1-202ENST00000504227 BTBD19C9JJ37 291 aa16.02■□□□□ 0.16
CYSTM1-202ENST00000504227 ZBTB5O15062 677 aa16.02■□□□□ 0.16
CYSTM1-202ENST00000504227 DTNBO60941 627 aa16.02■□□□□ 0.16
CYSTM1-202ENST00000504227 ZBED4O75132 1171 aa16.02■□□□□ 0.16
CYSTM1-202ENST00000504227 DEXIO95424 95 aa16.02■□□□□ 0.16
CYSTM1-202ENST00000504227 GJB2P29033 226 aa16.02■□□□□ 0.16
CYSTM1-202ENST00000504227 DSG3P32926 999 aa16.02■□□□□ 0.16
CYSTM1-202ENST00000504227 SREBF2Q12772 1141 aa16.02■□□□□ 0.16
CYSTM1-202ENST00000504227 NOGQ13253 232 aa16.02■□□□□ 0.16
CYSTM1-202ENST00000504227 HOMER1Q86YM7 354 aa16.02■□□□□ 0.16
CYSTM1-202ENST00000504227 PNMA3Q9UL41 463 aa16.02■□□□□ 0.16
CYSTM1-202ENST00000504227 MYPNQ86TC9 1320 aa16.01■□□□□ 0.15
CYSTM1-202ENST00000504227 PDHXO00330 501 aa16.01■□□□□ 0.15
CYSTM1-202ENST00000504227 FDPSP14324 419 aaKnown RBP16.01■□□□□ 0.15
CYSTM1-202ENST00000504227 TRAF1Q13077 416 aa16.01■□□□□ 0.15
CYSTM1-202ENST00000504227 CDC37Q16543 378 aaPredicted RBP16.01■□□□□ 0.15
CYSTM1-202ENST00000504227 OTUD7BQ6GQQ9 843 aa16.01■□□□□ 0.15
CYSTM1-202ENST00000504227 MTMR8Q96EF0 704 aa16.01■□□□□ 0.15
CYSTM1-202ENST00000504227 CAPNS2Q96L46 248 aa16.01■□□□□ 0.15
CYSTM1-202ENST00000504227 ASCC2Q9H1I8 757 aaPredicted RBP16.01■□□□□ 0.15
CYSTM1-202ENST00000504227 PTPRFP10586 1907 aa16.01■□□□□ 0.15
CYSTM1-202ENST00000504227 SCG2P13521 617 aa16■□□□□ 0.15
CYSTM1-202ENST00000504227 PDCP20941 246 aa16■□□□□ 0.15
CYSTM1-202ENST00000504227 SNAP25P60880 206 aa16■□□□□ 0.15
CYSTM1-202ENST00000504227 KIF23Q02241 960 aaPredicted RBP16■□□□□ 0.15
CYSTM1-202ENST00000504227 PFKFB3Q16875 520 aaPredicted RBP16■□□□□ 0.15
CYSTM1-202ENST00000504227 QRICH1Q2TAL8 776 aa16■□□□□ 0.15
CYSTM1-202ENST00000504227 ATG4CQ96DT6 458 aa16■□□□□ 0.15
CYSTM1-202ENST00000504227 P2RX7Q99572 595 aaKnown RBP16■□□□□ 0.15
CYSTM1-202ENST00000504227 ALG1Q9BT22 464 aa16■□□□□ 0.15
CYSTM1-202ENST00000504227 RANBP17Q9H2T7 1088 aaKnown RBP16■□□□□ 0.15
CYSTM1-202ENST00000504227 PNMA2Q9UL42 364 aa16■□□□□ 0.15
CYSTM1-202ENST00000504227 SPDYE16A6NNV3 312 aaPredicted RBP15.99■□□□□ 0.15
CYSTM1-202ENST00000504227 VWA5AO00534 786 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms