RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 CCL14Q16627 93 aa4.57□□□□□ -1.68
USP46-205ENST00000504078 NOL9Q5SY16 702 aaKnown RBP4.57□□□□□ -1.68
USP46-205ENST00000504078 ANO1Q5XXA6 986 aa4.57□□□□□ -1.68
USP46-205ENST00000504078 ZBTB33Q86T24 672 aa4.57□□□□□ -1.68
USP46-205ENST00000504078 FAM83AQ86UY5 434 aa4.57□□□□□ -1.68
USP46-205ENST00000504078 CD163Q86VB7 1156 aa4.57□□□□□ -1.68
USP46-205ENST00000504078 KRTAP19-1Q8IUB9 90 aa4.57□□□□□ -1.68
USP46-205ENST00000504078 SCYL3Q8IZE3 742 aa4.57□□□□□ -1.68
USP46-205ENST00000504078 LINS1Q8NG48 757 aa4.57□□□□□ -1.68
USP46-205ENST00000504078 PPM1EQ8WY54 764 aa4.57□□□□□ -1.68
USP46-205ENST00000504078 GTPBP3Q969Y2 492 aaKnown RBP4.57□□□□□ -1.68
USP46-205ENST00000504078 COA7Q96BR5 231 aa4.57□□□□□ -1.68
USP46-205ENST00000504078 CDX2Q99626 313 aaPredicted RBP4.57□□□□□ -1.68
USP46-205ENST00000504078 DDX4Q9NQI0 724 aaKnown RBP4.57□□□□□ -1.68
USP46-205ENST00000504078 GDF2Q9UK05 429 aaPredicted RBP4.57□□□□□ -1.68
USP46-205ENST00000504078 SIPA1L1O43166 1804 aa4.57□□□□□ -1.68
USP46-205ENST00000504078 DOCK3Q8IZD9 2030 aa4.56□□□□□ -1.68
USP46-205ENST00000504078 CDH23Q9H251 3354 aa4.56□□□□□ -1.68
USP46-205ENST00000504078 MAST3O60307 1309 aa4.56□□□□□ -1.68
USP46-205ENST00000504078 SCO2A0A1W2PP80 73 aa4.56□□□□□ -1.68
USP46-205ENST00000504078 DDTLA6NHG4 134 aaPredicted RBP4.56□□□□□ -1.68
USP46-205ENST00000504078 GRM8O00222 908 aa4.56□□□□□ -1.68
USP46-205ENST00000504078 ADH1AP07327 375 aa4.56□□□□□ -1.68
USP46-205ENST00000504078 ZKSCAN1P17029 563 aaPredicted RBP4.56□□□□□ -1.68
USP46-205ENST00000504078 PTGIRP43119 386 aa4.56□□□□□ -1.68
USP46-205ENST00000504078 DDX10Q13206 875 aaKnown RBP4.56□□□□□ -1.68
USP46-205ENST00000504078 IRF5Q13568 498 aa4.56□□□□□ -1.68
USP46-205ENST00000504078 UBE4AQ14139 1066 aa4.56□□□□□ -1.68
USP46-205ENST00000504078 RALBP1Q15311 655 aa4.56□□□□□ -1.68
USP46-205ENST00000504078 FAM110CQ1W6H9 321 aa4.56□□□□□ -1.68
USP46-205ENST00000504078 TUSC1Q2TAM9 212 aa4.56□□□□□ -1.68
USP46-205ENST00000504078 BEND3Q5T5X7 828 aa4.56□□□□□ -1.68
USP46-205ENST00000504078 WDR78Q5VTH9 848 aa4.56□□□□□ -1.68
USP46-205ENST00000504078 LINC00114Q6XXX2 140 aa4.56□□□□□ -1.68
USP46-205ENST00000504078 RIPOR1Q6ZS17 1223 aa4.56□□□□□ -1.68
USP46-205ENST00000504078 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.56□□□□□ -1.68
USP46-205ENST00000504078 FBXO33Q7Z6M2 555 aa4.56□□□□□ -1.68
USP46-205ENST00000504078 PARP9Q8IXQ6 854 aa4.56□□□□□ -1.68
USP46-205ENST00000504078 FAM151AQ8WW52 585 aa4.56□□□□□ -1.68
USP46-205ENST00000504078 NECAB3Q96P71 396 aaPredicted RBP4.56□□□□□ -1.68
USP46-205ENST00000504078 LBHD1Q9BQE6 289 aaPredicted RBP4.56□□□□□ -1.68
USP46-205ENST00000504078 PAGR1Q9BTK6 254 aa4.56□□□□□ -1.68
USP46-205ENST00000504078 TTYH1Q9H313 450 aaPredicted RBP4.56□□□□□ -1.68
USP46-205ENST00000504078 BICC1Q9H694 974 aaKnown RBP4.56□□□□□ -1.68
USP46-205ENST00000504078 HMX1Q9NP08 348 aaPredicted RBP4.56□□□□□ -1.68
USP46-205ENST00000504078 ZFP64Q9NPA5 681 aa4.56□□□□□ -1.68
USP46-205ENST00000504078 USP40Q9NVE5 1235 aa4.56□□□□□ -1.68
USP46-205ENST00000504078 ZNF112Q9UJU3 913 aa4.56□□□□□ -1.68
USP46-205ENST00000504078 AGTPBP1Q9UPW5 1226 aa4.56□□□□□ -1.68
USP46-205ENST00000504078 ATP11BQ9Y2G3 1177 aa4.56□□□□□ -1.68
USP46-205ENST00000504078 DYRK1BQ9Y463 629 aa4.56□□□□□ -1.68
USP46-205ENST00000504078 MYH2Q9UKX2 1941 aa4.56□□□□□ -1.68
USP46-205ENST00000504078 LAMA2P24043 3122 aaKnown RBP4.55□□□□□ -1.68
USP46-205ENST00000504078 SHISA8B8ZZ34 492 aa4.55□□□□□ -1.68
USP46-205ENST00000504078 ZMYND10O75800 440 aa4.55□□□□□ -1.68
USP46-205ENST00000504078 NBPF7P0C2Y1 421 aaPredicted RBP4.55□□□□□ -1.68
USP46-205ENST00000504078 ADORA1P30542 326 aa4.55□□□□□ -1.68
USP46-205ENST00000504078 RTP1P59025 263 aa4.55□□□□□ -1.68
USP46-205ENST00000504078 CALD1Q05682 793 aaKnown RBP4.55□□□□□ -1.68
USP46-205ENST00000504078 CACNB2Q08289 660 aaPredicted RBP4.55□□□□□ -1.68
USP46-205ENST00000504078 RRP1BQ14684 758 aaKnown RBP4.55□□□□□ -1.68
USP46-205ENST00000504078 SHHQ15465 462 aa4.55□□□□□ -1.68
USP46-205ENST00000504078 ZYXQ15942 572 aaKnown RBP4.55□□□□□ -1.68
USP46-205ENST00000504078 QPCTQ16769 361 aa4.55□□□□□ -1.68
USP46-205ENST00000504078 NBPF20Q3BBV1 942 aa4.55□□□□□ -1.68
USP46-205ENST00000504078 CAVIN4Q5BKX8 364 aa4.55□□□□□ -1.68
USP46-205ENST00000504078 ARTNQ5T4W7 220 aa4.55□□□□□ -1.68
USP46-205ENST00000504078 PDXDC2PQ6P474 469 aa4.55□□□□□ -1.68
USP46-205ENST00000504078 FASTKD5Q7L8L6 764 aaKnown RBP4.55□□□□□ -1.68
USP46-205ENST00000504078 PRICKLE2Q7Z3G6 844 aa4.55□□□□□ -1.68
USP46-205ENST00000504078 ANKRD44Q8N8A2 993 aa4.55□□□□□ -1.68
USP46-205ENST00000504078 VGLL2Q8N8G2 317 aa4.55□□□□□ -1.68
USP46-205ENST00000504078 TBC1D22AQ8WUA7 517 aa4.55□□□□□ -1.68
USP46-205ENST00000504078 EDARADDQ8WWZ3 215 aa4.55□□□□□ -1.68
USP46-205ENST00000504078 HOOK2Q96ED9 719 aa4.55□□□□□ -1.68
USP46-205ENST00000504078 KAZALD1Q96I82 304 aa4.55□□□□□ -1.68
USP46-205ENST00000504078 SENP6Q9GZR1 1112 aaPredicted RBP4.55□□□□□ -1.68
USP46-205ENST00000504078 SIL1Q9H173 461 aa4.55□□□□□ -1.68
USP46-205ENST00000504078 ASCC2Q9H1I8 757 aaPredicted RBP4.55□□□□□ -1.68
USP46-205ENST00000504078 PORCNQ9H237 461 aa4.55□□□□□ -1.68
USP46-205ENST00000504078 CWC22Q9HCG8 908 aaKnown RBP4.55□□□□□ -1.68
USP46-205ENST00000504078 TXNRD2Q9NNW7 524 aa4.55□□□□□ -1.68
USP46-205ENST00000504078 C9orf78Q9NZ63 289 aaPredicted RBP4.55□□□□□ -1.68
USP46-205ENST00000504078 NOP53Q9NZM5 478 aaKnown RBP4.55□□□□□ -1.68
USP46-205ENST00000504078 OGDHLQ9ULD0 1010 aa4.55□□□□□ -1.68
USP46-205ENST00000504078 AFG3L2Q9Y4W6 797 aa4.55□□□□□ -1.68
USP46-205ENST00000504078 LRRFIP2Q9Y608 721 aaKnown RBP4.55□□□□□ -1.68
USP46-205ENST00000504078 MROH5Q6ZUA9 1318 aa4.54□□□□□ -1.68
USP46-205ENST00000504078 CXCL11O14625 94 aa4.54□□□□□ -1.68
USP46-205ENST00000504078 GNB5O14775 395 aa4.54□□□□□ -1.68
USP46-205ENST00000504078 LILRB3O75022 631 aa4.54□□□□□ -1.68
USP46-205ENST00000504078 LDHBP07195 334 aaKnown RBP4.54□□□□□ -1.68
USP46-205ENST00000504078 COL6A1P12109 1028 aa4.54□□□□□ -1.68
USP46-205ENST00000504078 SLC5A1P13866 664 aa4.54□□□□□ -1.68
USP46-205ENST00000504078 CNGA1P29973 690 aa4.54□□□□□ -1.68
USP46-205ENST00000504078 GPC1P35052 558 aa4.54□□□□□ -1.68
USP46-205ENST00000504078 PLA2G5P39877 138 aa4.54□□□□□ -1.68
USP46-205ENST00000504078 BTDP43251 543 aa4.54□□□□□ -1.68
USP46-205ENST00000504078 PHKA1P46020 1223 aa4.54□□□□□ -1.68
USP46-205ENST00000504078 IRX3P78415 501 aaPredicted RBP4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms