RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 APOBEC3HQ6NTF7 200 aaKnown RBP10.86□□□□□ -0.67
PDLIM5-207ENST00000503974 TAX1BP1Q86VP1 789 aa10.86□□□□□ -0.67
PDLIM5-207ENST00000503974 IQCF2Q8IXL9 164 aa10.86□□□□□ -0.67
PDLIM5-207ENST00000503974 ARL10Q8N8L6 244 aa10.86□□□□□ -0.67
PDLIM5-207ENST00000503974 APPBP2Q92624 585 aa10.86□□□□□ -0.67
PDLIM5-207ENST00000503974 RILPL2Q969X0 211 aa10.86□□□□□ -0.67
PDLIM5-207ENST00000503974 DDX60LQ5H9U9 1706 aaKnown RBP10.86□□□□□ -0.67
PDLIM5-207ENST00000503974 ANKRD65E5RJM6 399 aa10.86□□□□□ -0.67
PDLIM5-207ENST00000503974 H7C1D1 291 aa10.86□□□□□ -0.67
PDLIM5-207ENST00000503974 HIP1O00291 1037 aa10.86□□□□□ -0.67
PDLIM5-207ENST00000503974 CHUKO15111 745 aa10.86□□□□□ -0.67
PDLIM5-207ENST00000503974 EGFRP00533 1210 aa10.86□□□□□ -0.67
PDLIM5-207ENST00000503974 FAM200BP0CF97 657 aa10.86□□□□□ -0.67
PDLIM5-207ENST00000503974 CYP7A1P22680 504 aa10.86□□□□□ -0.67
PDLIM5-207ENST00000503974 KIF4BQ2VIQ3 1234 aa10.86□□□□□ -0.67
PDLIM5-207ENST00000503974 TRIM7Q9C029 511 aa10.86□□□□□ -0.67
PDLIM5-207ENST00000503974 TAF1DQ9H5J8 278 aaPredicted RBP10.86□□□□□ -0.67
PDLIM5-207ENST00000503974 WNT10BO00744 389 aa10.85□□□□□ -0.67
PDLIM5-207ENST00000503974 EPHX2P34913 555 aa10.85□□□□□ -0.67
PDLIM5-207ENST00000503974 SFSWAPQ12872 951 aaKnown RBP10.85□□□□□ -0.67
PDLIM5-207ENST00000503974 IQCB1Q15051 598 aa10.85□□□□□ -0.67
PDLIM5-207ENST00000503974 USP50Q70EL3 339 aaPredicted RBP10.85□□□□□ -0.67
PDLIM5-207ENST00000503974 CDC37L1Q7L3B6 337 aa10.85□□□□□ -0.67
PDLIM5-207ENST00000503974 TRPM4Q8TD43 1214 aa10.85□□□□□ -0.67
PDLIM5-207ENST00000503974 SAAL1Q96ER3 474 aa10.85□□□□□ -0.67
PDLIM5-207ENST00000503974 DDX11Q96FC9 970 aa10.85□□□□□ -0.67
PDLIM5-207ENST00000503974 RIOK1Q9BRS2 568 aaKnown RBP10.85□□□□□ -0.67
PDLIM5-207ENST00000503974 PCDHAC2Q9Y5I4 1007 aa10.85□□□□□ -0.67
PDLIM5-207ENST00000503974 BTDP43251 543 aa10.85□□□□□ -0.67
PDLIM5-207ENST00000503974 HIRAP54198 1017 aaPredicted RBP10.85□□□□□ -0.67
PDLIM5-207ENST00000503974 DLGAP5Q15398 846 aa10.85□□□□□ -0.67
PDLIM5-207ENST00000503974 SAMD7Q7Z3H4 446 aa10.85□□□□□ -0.67
PDLIM5-207ENST00000503974 IQCA1Q86XH1 822 aa10.85□□□□□ -0.67
PDLIM5-207ENST00000503974 OSBP2Q969R2 916 aa10.85□□□□□ -0.67
PDLIM5-207ENST00000503974 SYAP1Q96A49 352 aaPredicted RBP10.85□□□□□ -0.67
PDLIM5-207ENST00000503974 PRMT6Q96LA8 375 aaPredicted RBP10.85□□□□□ -0.67
PDLIM5-207ENST00000503974 UNC45AQ9H3U1 944 aa10.85□□□□□ -0.67
PDLIM5-207ENST00000503974 ARGLU1Q9NWB6 273 aaPredicted RBP10.85□□□□□ -0.67
PDLIM5-207ENST00000503974 VEGFAP15692 232 aaPredicted RBP10.84□□□□□ -0.67
PDLIM5-207ENST00000503974 DEUP1Q05D60 604 aa10.84□□□□□ -0.67
PDLIM5-207ENST00000503974 LAMB3Q13751 1172 aa10.84□□□□□ -0.67
PDLIM5-207ENST00000503974 TBC1D10BQ4KMP7 808 aaPredicted RBP10.84□□□□□ -0.67
PDLIM5-207ENST00000503974 FBXW10Q5XX13 1052 aa10.84□□□□□ -0.67
PDLIM5-207ENST00000503974 CACTIN-AS1Q8N1I8 211 aa10.84□□□□□ -0.67
PDLIM5-207ENST00000503974 SPDYE1Q8NFV5 336 aaPredicted RBP10.84□□□□□ -0.67
PDLIM5-207ENST00000503974 B4GALNT2Q8NHY0 566 aa10.84□□□□□ -0.67
PDLIM5-207ENST00000503974 TSGA10Q9BZW7 698 aa10.84□□□□□ -0.67
PDLIM5-207ENST00000503974 PUS7LQ9H0K6 701 aaKnown RBP10.84□□□□□ -0.67
PDLIM5-207ENST00000503974 HELLSQ9NRZ9 838 aa10.84□□□□□ -0.67
PDLIM5-207ENST00000503974 PGAP2Q9UHJ9 254 aa10.84□□□□□ -0.67
PDLIM5-207ENST00000503974 A0A0D9SFI3 127 aa10.83□□□□□ -0.68
PDLIM5-207ENST00000503974 RANBP1P43487 201 aa10.83□□□□□ -0.68
PDLIM5-207ENST00000503974 GJA8P48165 433 aa10.83□□□□□ -0.68
PDLIM5-207ENST00000503974 SLC7A5Q01650 507 aa10.83□□□□□ -0.68
PDLIM5-207ENST00000503974 NMIQ13287 307 aaPredicted RBP10.83□□□□□ -0.68
PDLIM5-207ENST00000503974 SPDYE2Q495Y8 402 aa10.83□□□□□ -0.68
PDLIM5-207ENST00000503974 ISM2Q6H9L7 571 aa10.83□□□□□ -0.68
PDLIM5-207ENST00000503974 NOL8Q76FK4 1167 aaKnown RBP10.83□□□□□ -0.68
PDLIM5-207ENST00000503974 KIAA1328Q86T90 577 aa10.83□□□□□ -0.68
PDLIM5-207ENST00000503974 PNMA8AQ86V59 439 aaPredicted RBP10.83□□□□□ -0.68
PDLIM5-207ENST00000503974 SAMD3Q8N6K7 520 aa10.83□□□□□ -0.68
PDLIM5-207ENST00000503974 FAM227BQ96M60 508 aa10.83□□□□□ -0.68
PDLIM5-207ENST00000503974 NMRK2Q9NPI5 230 aa10.83□□□□□ -0.68
PDLIM5-207ENST00000503974 TMEM98Q9Y2Y6 226 aa10.83□□□□□ -0.68
PDLIM5-207ENST00000503974 LRRC10BA6NIK2 292 aa10.83□□□□□ -0.68
PDLIM5-207ENST00000503974 F8VZ95 297 aa10.83□□□□□ -0.68
PDLIM5-207ENST00000503974 M0R2C6 588 aa10.83□□□□□ -0.68
PDLIM5-207ENST00000503974 CDC45O75419 566 aa10.83□□□□□ -0.68
PDLIM5-207ENST00000503974 NPM3O75607 178 aaKnown RBP10.83□□□□□ -0.68
PDLIM5-207ENST00000503974 BAG3O95817 575 aa10.83□□□□□ -0.68
PDLIM5-207ENST00000503974 PLCG2P16885 1265 aa10.83□□□□□ -0.68
PDLIM5-207ENST00000503974 TRPC1P48995 793 aa10.83□□□□□ -0.68
PDLIM5-207ENST00000503974 CLNS1AP54105 237 aaKnown RBP10.83□□□□□ -0.68
PDLIM5-207ENST00000503974 TPD52L1Q16890 204 aaPredicted RBP10.83□□□□□ -0.68
PDLIM5-207ENST00000503974 ERCC6LQ2NKX8 1250 aa10.83□□□□□ -0.68
PDLIM5-207ENST00000503974 CDC42EP5Q6NZY7 148 aa10.83□□□□□ -0.68
PDLIM5-207ENST00000503974 FILIP1Q7Z7B0 1213 aa10.83□□□□□ -0.68
PDLIM5-207ENST00000503974 ZC3H15Q8WU90 426 aaKnown RBP10.83□□□□□ -0.68
PDLIM5-207ENST00000503974 CABS1Q96KC9 395 aa10.83□□□□□ -0.68
PDLIM5-207ENST00000503974 POLR3CQ9BUI4 534 aaPredicted RBP10.83□□□□□ -0.68
PDLIM5-207ENST00000503974 MMADHCQ9H3L0 296 aaPredicted RBP10.83□□□□□ -0.68
PDLIM5-207ENST00000503974 RRAGCQ9HB90 399 aa10.83□□□□□ -0.68
PDLIM5-207ENST00000503974 AATFQ9NY61 560 aaKnown RBP eCLIP10.83□□□□□ -0.68
PDLIM5-207ENST00000503974 SPATA7Q9P0W8 599 aa10.83□□□□□ -0.68
PDLIM5-207ENST00000503974 ELP1O95163 1332 aa10.83□□□□□ -0.68
PDLIM5-207ENST00000503974 PITPNM2Q9BZ72 1349 aa10.83□□□□□ -0.68
PDLIM5-207ENST00000503974 NAV1Q8NEY1 1877 aa10.83□□□□□ -0.68
PDLIM5-207ENST00000503974 COL2A1P02458 1487 aaPredicted RBP10.82□□□□□ -0.68
PDLIM5-207ENST00000503974 MAGEB6P1A0A0J9YX57 407 aa10.82□□□□□ -0.68
PDLIM5-207ENST00000503974 SLC27A2O14975 620 aa10.82□□□□□ -0.68
PDLIM5-207ENST00000503974 PPFIA4O75335 1185 aa10.82□□□□□ -0.68
PDLIM5-207ENST00000503974 SASH3O75995 380 aa10.82□□□□□ -0.68
PDLIM5-207ENST00000503974 CD2BP2O95400 341 aaKnown RBP10.82□□□□□ -0.68
PDLIM5-207ENST00000503974 TBC1D8O95759 1140 aa10.82□□□□□ -0.68
PDLIM5-207ENST00000503974 VCAM1P19320 739 aa10.82□□□□□ -0.68
PDLIM5-207ENST00000503974 MAGEA10P43363 369 aaPredicted RBP10.82□□□□□ -0.68
PDLIM5-207ENST00000503974 DYNLL1P63167 89 aaKnown RBP10.82□□□□□ -0.68
PDLIM5-207ENST00000503974 FILIP1LQ4L180 1135 aa10.82□□□□□ -0.68
PDLIM5-207ENST00000503974 FKBP1CQ5VVH2 108 aa10.82□□□□□ -0.68
PDLIM5-207ENST00000503974 LCORLQ8N3X6 602 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms