RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 POTEB2H3BUK9 544 aa14.18□□□□□ -0.14
MED28-203ENST00000503945 IGHDP01880 384 aa14.18□□□□□ -0.14
MED28-203ENST00000503945 SLC4A3P48751 1232 aa14.18□□□□□ -0.14
MED28-203ENST00000503945 ALX1Q15699 326 aa14.18□□□□□ -0.14
MED28-203ENST00000503945 GJC2Q5T442 439 aaPredicted RBP14.18□□□□□ -0.14
MED28-203ENST00000503945 SLFN13Q68D06 897 aa14.18□□□□□ -0.14
MED28-203ENST00000503945 CHD1LQ86WJ1 897 aa14.18□□□□□ -0.14
MED28-203ENST00000503945 GMCL1P1Q8NEA9 526 aa14.18□□□□□ -0.14
MED28-203ENST00000503945 EXOC6Q8TAG9 804 aa14.18□□□□□ -0.14
MED28-203ENST00000503945 DDX11Q96FC9 970 aa14.18□□□□□ -0.14
MED28-203ENST00000503945 DIS3Q9Y2L1 958 aaKnown RBP14.18□□□□□ -0.14
MED28-203ENST00000503945 ROBO3Q96MS0 1386 aa14.18□□□□□ -0.14
MED28-203ENST00000503945 NAV1Q8NEY1 1877 aa14.17□□□□□ -0.14
MED28-203ENST00000503945 RANBP6O60518 1105 aaKnown RBP14.17□□□□□ -0.14
MED28-203ENST00000503945 FGAP02671 866 aa14.17□□□□□ -0.14
MED28-203ENST00000503945 BMP3P12645 472 aa14.17□□□□□ -0.14
MED28-203ENST00000503945 CYBAP13498 195 aa14.17□□□□□ -0.14
MED28-203ENST00000503945 RTP1P59025 263 aa14.17□□□□□ -0.14
MED28-203ENST00000503945 NUCB1Q02818 461 aa14.17□□□□□ -0.14
MED28-203ENST00000503945 CTDSPL2Q05D32 466 aa14.17□□□□□ -0.14
MED28-203ENST00000503945 PRAMEF19Q5SWL8 479 aa14.17□□□□□ -0.14
MED28-203ENST00000503945 CPXCR1Q8N123 301 aa14.17□□□□□ -0.14
MED28-203ENST00000503945 CHURC1Q8WUH1 139 aa14.17□□□□□ -0.14
MED28-203ENST00000503945 KIFC2Q96AC6 838 aa14.17□□□□□ -0.14
MED28-203ENST00000503945 MAML3Q96JK9 1138 aa14.17□□□□□ -0.14
MED28-203ENST00000503945 LBHD1Q9BQE6 289 aaPredicted RBP14.17□□□□□ -0.14
MED28-203ENST00000503945 TEX13BQ9BXU2 312 aa14.17□□□□□ -0.14
MED28-203ENST00000503945 INCENPQ9NQS7 918 aa14.17□□□□□ -0.14
MED28-203ENST00000503945 ISY1Q9ULR0 285 aaKnown RBP14.17□□□□□ -0.14
MED28-203ENST00000503945 SUPT16HQ9Y5B9 1047 aaKnown RBP14.17□□□□□ -0.14
MED28-203ENST00000503945 DNM1LO00429 736 aa14.16□□□□□ -0.14
MED28-203ENST00000503945 ATP2A1O14983 1001 aa14.16□□□□□ -0.14
MED28-203ENST00000503945 SEPT4O43236 478 aa14.16□□□□□ -0.14
MED28-203ENST00000503945 PGK2P07205 417 aa14.16□□□□□ -0.14
MED28-203ENST00000503945 FDX1P10109 184 aa14.16□□□□□ -0.14
MED28-203ENST00000503945 MFAP1P55081 439 aaKnown RBP14.16□□□□□ -0.14
MED28-203ENST00000503945 VPS53Q5VIR6 699 aa14.16□□□□□ -0.14
MED28-203ENST00000503945 ANO1Q5XXA6 986 aa14.16□□□□□ -0.14
MED28-203ENST00000503945 SNRNP48Q6IEG0 339 aaKnown RBP14.16□□□□□ -0.14
MED28-203ENST00000503945 SLC39A5Q6ZMH5 540 aa14.16□□□□□ -0.14
MED28-203ENST00000503945 REPS2Q8NFH8 660 aa14.16□□□□□ -0.14
MED28-203ENST00000503945 FAM227BQ96M60 508 aa14.16□□□□□ -0.14
MED28-203ENST00000503945 TOMM22Q9NS69 142 aa14.16□□□□□ -0.14
MED28-203ENST00000503945 ANAPC4Q9UJX5 808 aa14.16□□□□□ -0.14
MED28-203ENST00000503945 ZNF214Q9UL59 606 aaPredicted RBP14.16□□□□□ -0.14
MED28-203ENST00000503945 STX8Q9UNK0 236 aa14.16□□□□□ -0.14
MED28-203ENST00000503945 MYH8P13535 1937 aa14.15□□□□□ -0.14
MED28-203ENST00000503945 TMEM232C9JQI7 657 aa14.15□□□□□ -0.14
MED28-203ENST00000503945 HSPD1P10809 573 aaKnown RBP14.15□□□□□ -0.14
MED28-203ENST00000503945 MCCP23508 829 aa14.15□□□□□ -0.14
MED28-203ENST00000503945 SLC1A4P43007 532 aa14.15□□□□□ -0.14
MED28-203ENST00000503945 ZNF792Q3KQV3 632 aa14.15□□□□□ -0.14
MED28-203ENST00000503945 FAM109BQ6ICB4 259 aaPredicted RBP14.15□□□□□ -0.14
MED28-203ENST00000503945 PLEKHM2Q8IWE5 1019 aa14.15□□□□□ -0.14
MED28-203ENST00000503945 LRRC47Q8N1G4 583 aaKnown RBP14.15□□□□□ -0.14
MED28-203ENST00000503945 STAG1Q8WVM7 1258 aa14.15□□□□□ -0.14
MED28-203ENST00000503945 GUCD1Q96NT3 240 aa14.15□□□□□ -0.14
MED28-203ENST00000503945 TINF2Q9BSI4 451 aa14.15□□□□□ -0.14
MED28-203ENST00000503945 OSBPL3Q9H4L5 887 aa14.15□□□□□ -0.14
MED28-203ENST00000503945 NRBP1Q9UHY1 535 aa14.15□□□□□ -0.14
MED28-203ENST00000503945 ATP11BQ9Y2G3 1177 aa14.15□□□□□ -0.14
MED28-203ENST00000503945 BAZ2AQ9UIF9 1905 aaKnown RBP14.15□□□□□ -0.14
MED28-203ENST00000503945 LTBP2Q14767 1821 aa14.14□□□□□ -0.15
MED28-203ENST00000503945 MYCNP04198 464 aaPredicted RBP14.14□□□□□ -0.15
MED28-203ENST00000503945 SDSP20132 328 aa14.14□□□□□ -0.15
MED28-203ENST00000503945 OAZ1P54368 228 aa14.14□□□□□ -0.15
MED28-203ENST00000503945 IKQ13123 557 aaPredicted RBP14.14□□□□□ -0.15
MED28-203ENST00000503945 NMIQ13287 307 aaPredicted RBP14.14□□□□□ -0.15
MED28-203ENST00000503945 RCSD1Q6JBY9 416 aa14.14□□□□□ -0.15
MED28-203ENST00000503945 FAM160B2Q86V87 743 aa14.14□□□□□ -0.15
MED28-203ENST00000503945 ANKRD35Q8N283 1001 aa14.14□□□□□ -0.15
MED28-203ENST00000503945 FAM161BQ96MY7 647 aa14.14□□□□□ -0.15
MED28-203ENST00000503945 SLC38A10Q9HBR0 1119 aa14.14□□□□□ -0.15
MED28-203ENST00000503945 RAVER2Q9HCJ3 691 aaKnown RBP14.14□□□□□ -0.15
MED28-203ENST00000503945 IL17RBQ9NRM6 502 aa14.14□□□□□ -0.15
MED28-203ENST00000503945 PRKAG2Q9UGJ0 569 aa14.14□□□□□ -0.15
MED28-203ENST00000503945 FBXO40Q9UH90 709 aa14.14□□□□□ -0.15
MED28-203ENST00000503945 CNPY2Q9Y2B0 182 aa14.14□□□□□ -0.15
MED28-203ENST00000503945 RIPK3Q9Y572 518 aa14.14□□□□□ -0.15
MED28-203ENST00000503945 COL11A1P12107 1806 aaPredicted RBP14.13□□□□□ -0.15
MED28-203ENST00000503945 A0A0D9SFI3 127 aa14.13□□□□□ -0.15
MED28-203ENST00000503945 FOXP2O15409 715 aa14.13□□□□□ -0.15
MED28-203ENST00000503945 ORC4O43929 436 aa14.13□□□□□ -0.15
MED28-203ENST00000503945 FGRP09769 529 aa14.13□□□□□ -0.15
MED28-203ENST00000503945 STAT2P52630 851 aa14.13□□□□□ -0.15
MED28-203ENST00000503945 SHHQ15465 462 aa14.13□□□□□ -0.15
MED28-203ENST00000503945 RRP12Q5JTH9 1297 aaKnown RBP14.13□□□□□ -0.15
MED28-203ENST00000503945 MFSD6Q6ZSS7 791 aa14.13□□□□□ -0.15
MED28-203ENST00000503945 MSL3Q8N5Y2 521 aaKnown RBP14.13□□□□□ -0.15
MED28-203ENST00000503945 CHST13Q8NET6 341 aa14.13□□□□□ -0.15
MED28-203ENST00000503945 CHMP4CQ96CF2 233 aa14.13□□□□□ -0.15
MED28-203ENST00000503945 GMCL1Q96IK5 515 aa14.13□□□□□ -0.15
MED28-203ENST00000503945 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.13□□□□□ -0.15
MED28-203ENST00000503945 PARP14Q460N5 1801 aa14.13□□□□□ -0.15
MED28-203ENST00000503945 ZNF236Q9UL36 1845 aa14.13□□□□□ -0.15
MED28-203ENST00000503945 KBTBD13C9JR72 458 aa14.12□□□□□ -0.15
MED28-203ENST00000503945 HIP1O00291 1037 aa14.12□□□□□ -0.15
MED28-203ENST00000503945 NMT2O60551 498 aa14.12□□□□□ -0.15
MED28-203ENST00000503945 PLA2G6O60733 806 aa14.12□□□□□ -0.15
MED28-203ENST00000503945 RARBP10826 455 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms