RNA–Protein interactions for RNA: ENST00000503884.5

PROM1-204, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-204ENST00000503884 ADAMTS4O75173 837 aa10.78□□□□□ -0.68
PROM1-204ENST00000503884 ITGB8P26012 769 aa10.78□□□□□ -0.68
PROM1-204ENST00000503884 COPB2P35606 906 aa10.78□□□□□ -0.68
PROM1-204ENST00000503884 KCTD2Q14681 263 aa10.78□□□□□ -0.68
PROM1-204ENST00000503884 C9orf50Q5SZB4 431 aa10.78□□□□□ -0.68
PROM1-204ENST00000503884 MAMDC4Q6UXC1 1216 aa10.78□□□□□ -0.68
PROM1-204ENST00000503884 MKL1Q969V6 931 aa10.78□□□□□ -0.68
PROM1-204ENST00000503884 DDRGK1Q96HY6 314 aa10.78□□□□□ -0.68
PROM1-204ENST00000503884 CRBNQ96SW2 442 aa10.78□□□□□ -0.68
PROM1-204ENST00000503884 DCTPP1Q9H773 170 aa10.78□□□□□ -0.68
PROM1-204ENST00000503884 XPNPEP3Q9NQH7 507 aa10.78□□□□□ -0.68
PROM1-204ENST00000503884 ECHDC1Q9NTX5 307 aa10.78□□□□□ -0.68
PROM1-204ENST00000503884 PRKAG2Q9UGJ0 569 aa10.78□□□□□ -0.68
PROM1-204ENST00000503884 RIPK3Q9Y572 518 aa10.78□□□□□ -0.68
PROM1-204ENST00000503884 F5H6K3 240 aa10.77□□□□□ -0.69
PROM1-204ENST00000503884 SNAI1O95863 264 aaPredicted RBP10.77□□□□□ -0.69
PROM1-204ENST00000503884 PGK1P00558 417 aa10.77□□□□□ -0.69
PROM1-204ENST00000503884 RARBP10826 455 aa10.77□□□□□ -0.69
PROM1-204ENST00000503884 AKR1A1P14550 325 aa10.77□□□□□ -0.69
PROM1-204ENST00000503884 TLE2Q04725 743 aa10.77□□□□□ -0.69
PROM1-204ENST00000503884 KLRC3Q07444 240 aa10.77□□□□□ -0.69
PROM1-204ENST00000503884 CCSAPQ6IQ19 270 aaPredicted RBP10.77□□□□□ -0.69
PROM1-204ENST00000503884 MSL3Q8N5Y2 521 aaKnown RBP10.77□□□□□ -0.69
PROM1-204ENST00000503884 APPBP2Q92624 585 aa10.77□□□□□ -0.69
PROM1-204ENST00000503884 BADQ92934 168 aa10.77□□□□□ -0.69
PROM1-204ENST00000503884 FERMT2Q96AC1 680 aa10.77□□□□□ -0.69
PROM1-204ENST00000503884 FGD4Q96M96 766 aa10.77□□□□□ -0.69
PROM1-204ENST00000503884 NUP88Q99567 741 aaPredicted RBP10.77□□□□□ -0.69
PROM1-204ENST00000503884 SLF1Q9BQI6 1058 aa10.77□□□□□ -0.69
PROM1-204ENST00000503884 TEX13BQ9BXU2 312 aa10.77□□□□□ -0.69
PROM1-204ENST00000503884 BCL11AQ9H165 835 aa10.77□□□□□ -0.69
PROM1-204ENST00000503884 EPB41L4AQ9HCS5 686 aaPredicted RBP10.77□□□□□ -0.69
PROM1-204ENST00000503884 SYNPO2Q9UMS6 1093 aa10.77□□□□□ -0.69
PROM1-204ENST00000503884 SYNGAP1Q96PV0 1343 aa10.77□□□□□ -0.69
PROM1-204ENST00000503884 MUC3AQ02505 3323 aa10.76□□□□□ -0.69
PROM1-204ENST00000503884 A0A1W2PQ45 241 aaPredicted RBP10.76□□□□□ -0.69
PROM1-204ENST00000503884 A0A1W2PQY0 241 aa10.76□□□□□ -0.69
PROM1-204ENST00000503884 KIAA0355O15063 1070 aa10.76□□□□□ -0.69
PROM1-204ENST00000503884 RNF113AO15541 343 aaKnown RBP10.76□□□□□ -0.69
PROM1-204ENST00000503884 NDUFB10O96000 172 aa10.76□□□□□ -0.69
PROM1-204ENST00000503884 SNRNP48Q6IEG0 339 aaKnown RBP10.76□□□□□ -0.69
PROM1-204ENST00000503884 ZNF467Q7Z7K2 595 aaPredicted RBP10.76□□□□□ -0.69
PROM1-204ENST00000503884 RNF180Q86T96 592 aa10.76□□□□□ -0.69
PROM1-204ENST00000503884 PRPF38AQ8NAV1 312 aaKnown RBP10.76□□□□□ -0.69
PROM1-204ENST00000503884 KLHDC9Q8NEP7 349 aa10.76□□□□□ -0.69
PROM1-204ENST00000503884 TSEN34Q9BSV6 310 aaKnown RBP10.76□□□□□ -0.69
PROM1-204ENST00000503884 TACC3Q9Y6A5 838 aa10.76□□□□□ -0.69
PROM1-204ENST00000503884 PLIN4Q96Q06 1357 aa10.76□□□□□ -0.69
PROM1-204ENST00000503884 M0R2C6 588 aa10.75□□□□□ -0.69
PROM1-204ENST00000503884 GPAA1O43292 621 aa10.75□□□□□ -0.69
PROM1-204ENST00000503884 ZFYP08048 801 aaPredicted RBP10.75□□□□□ -0.69
PROM1-204ENST00000503884 EPHB4P54760 987 aa10.75□□□□□ -0.69
PROM1-204ENST00000503884 SMAD3P84022 425 aaKnown RBP10.75□□□□□ -0.69
PROM1-204ENST00000503884 AAMPQ13685 434 aa10.75□□□□□ -0.69
PROM1-204ENST00000503884 ZNF697Q5TEC3 545 aa10.75□□□□□ -0.69
PROM1-204ENST00000503884 ANKRD33Q7Z3H0 272 aa10.75□□□□□ -0.69
PROM1-204ENST00000503884 LENG1Q96BZ8 264 aaPredicted RBP10.75□□□□□ -0.69
PROM1-204ENST00000503884 TOX2Q96NM4 488 aa10.75□□□□□ -0.69
PROM1-204ENST00000503884 MKNK2Q9HBH9 465 aa10.75□□□□□ -0.69
PROM1-204ENST00000503884 SLC38A10Q9HBR0 1119 aa10.75□□□□□ -0.69
PROM1-204ENST00000503884 PRDM5Q9NQX1 630 aaPredicted RBP10.75□□□□□ -0.69
PROM1-204ENST00000503884 MTMR4Q9NYA4 1195 aa10.75□□□□□ -0.69
PROM1-204ENST00000503884 SYNRGQ9UMZ2 1314 aa10.75□□□□□ -0.69
PROM1-204ENST00000503884 LCTP09848 1927 aa10.74□□□□□ -0.69
PROM1-204ENST00000503884 MOXD2PA6NHM9 499 aa10.74□□□□□ -0.69
PROM1-204ENST00000503884 MINDY4BA8MYZ0 360 aa10.74□□□□□ -0.69
PROM1-204ENST00000503884 ADCY6O43306 1168 aa10.74□□□□□ -0.69
PROM1-204ENST00000503884 CLTBP09497 229 aa10.74□□□□□ -0.69
PROM1-204ENST00000503884 GNAT2P19087 354 aa10.74□□□□□ -0.69
PROM1-204ENST00000503884 CST5P28325 142 aaPredicted RBP10.74□□□□□ -0.69
PROM1-204ENST00000503884 ACLYP53396 1101 aa10.74□□□□□ -0.69
PROM1-204ENST00000503884 FAAP100Q0VG06 881 aa10.74□□□□□ -0.69
PROM1-204ENST00000503884 TSHZ3Q63HK5 1081 aa10.74□□□□□ -0.69
PROM1-204ENST00000503884 IFNL3Q8IZI9 196 aa10.74□□□□□ -0.69
PROM1-204ENST00000503884 GMCL1P1Q8NEA9 526 aa10.74□□□□□ -0.69
PROM1-204ENST00000503884 CEP95Q96GE4 821 aa10.74□□□□□ -0.69
PROM1-204ENST00000503884 FAM161BQ96MY7 647 aa10.74□□□□□ -0.69
PROM1-204ENST00000503884 KATNBL1Q9H079 304 aa10.74□□□□□ -0.69
PROM1-204ENST00000503884 TTYH1Q9H313 450 aaPredicted RBP10.74□□□□□ -0.69
PROM1-204ENST00000503884 SEMA6BQ9H3T3 888 aa10.74□□□□□ -0.69
PROM1-204ENST00000503884 CLIP2Q9UDT6 1046 aa10.74□□□□□ -0.69
PROM1-204ENST00000503884 CNPY2Q9Y2B0 182 aa10.74□□□□□ -0.69
PROM1-204ENST00000503884 LRRC37A2A6NM11 1700 aa10.74□□□□□ -0.69
PROM1-204ENST00000503884 CHD9Q3L8U1 2897 aa10.74□□□□□ -0.69
PROM1-204ENST00000503884 TTC28Q96AY4 2481 aa10.74□□□□□ -0.69
PROM1-204ENST00000503884 MYADML2A6NDP7 307 aa10.73□□□□□ -0.69
PROM1-204ENST00000503884 PATL2C9JE40 543 aaKnown RBP10.73□□□□□ -0.69
PROM1-204ENST00000503884 RAD21O60216 631 aa10.73□□□□□ -0.69
PROM1-204ENST00000503884 DUSP11O75319 330 aaKnown RBP10.73□□□□□ -0.69
PROM1-204ENST00000503884 PRDM1O75626 825 aa10.73□□□□□ -0.69
PROM1-204ENST00000503884 CDK7P50613 346 aa10.73□□□□□ -0.69
PROM1-204ENST00000503884 OAZ1P54368 228 aa10.73□□□□□ -0.69
PROM1-204ENST00000503884 NKX3-2P78367 333 aa10.73□□□□□ -0.69
PROM1-204ENST00000503884 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.73□□□□□ -0.69
PROM1-204ENST00000503884 STK11IPQ8N1F8 1099 aa10.73□□□□□ -0.69
PROM1-204ENST00000503884 NEDD1Q8NHV4 660 aa10.73□□□□□ -0.69
PROM1-204ENST00000503884 PI4K2BQ8TCG2 481 aa10.73□□□□□ -0.69
PROM1-204ENST00000503884 CDX2Q99626 313 aaPredicted RBP10.73□□□□□ -0.69
PROM1-204ENST00000503884 COL25A1Q9BXS0 654 aaPredicted RBP10.73□□□□□ -0.69
PROM1-204ENST00000503884 UPF3AQ9H1J1 476 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms