RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 TRMT2AQ8IZ69 625 aaKnown RBP19.17■□□□□ 0.66
PDLIM7-210ENST00000503827 CRNKL1Q9BZJ0 848 aaKnown RBP19.17■□□□□ 0.66
PDLIM7-210ENST00000503827 SWAP70Q9UH65 585 aa19.17■□□□□ 0.66
PDLIM7-210ENST00000503827 YBX2Q9Y2T7 364 aaKnown RBP19.17■□□□□ 0.66
PDLIM7-210ENST00000503827 MYADML2A6NDP7 307 aa19.16■□□□□ 0.66
PDLIM7-210ENST00000503827 SURF6O75683 361 aaKnown RBP19.16■□□□□ 0.66
PDLIM7-210ENST00000503827 SKIV2LQ15477 1246 aaKnown RBP19.16■□□□□ 0.66
PDLIM7-210ENST00000503827 SIAH1Q8IUQ4 282 aa19.16■□□□□ 0.66
PDLIM7-210ENST00000503827 CCDC8Q9H0W5 538 aaPredicted RBP19.16■□□□□ 0.66
PDLIM7-210ENST00000503827 ANTXR1Q9H6X2 564 aa19.16■□□□□ 0.66
PDLIM7-210ENST00000503827 TLR7Q9NYK1 1049 aaKnown RBP19.16■□□□□ 0.66
PDLIM7-210ENST00000503827 MCM3APO60318 1980 aa19.15■□□□□ 0.66
PDLIM7-210ENST00000503827 VWA5AO00534 786 aa19.15■□□□□ 0.66
PDLIM7-210ENST00000503827 SNAI1O95863 264 aaPredicted RBP19.15■□□□□ 0.66
PDLIM7-210ENST00000503827 CYP2C18P33260 490 aa19.15■□□□□ 0.66
PDLIM7-210ENST00000503827 KCNQ1P51787 676 aa19.15■□□□□ 0.66
PDLIM7-210ENST00000503827 RARSP54136 660 aaKnown RBP19.15■□□□□ 0.66
PDLIM7-210ENST00000503827 EVX2Q03828 476 aa19.15■□□□□ 0.66
PDLIM7-210ENST00000503827 POLA2Q14181 598 aa19.15■□□□□ 0.66
PDLIM7-210ENST00000503827 PPP2R2DQ66LE6 453 aa19.15■□□□□ 0.66
PDLIM7-210ENST00000503827 CLEC10AQ8IUN9 316 aa19.15■□□□□ 0.66
PDLIM7-210ENST00000503827 DDX11Q96FC9 970 aa19.15■□□□□ 0.66
PDLIM7-210ENST00000503827 EPHX3Q9H6B9 360 aa19.15■□□□□ 0.66
PDLIM7-210ENST00000503827 FBXO28Q9NVF7 368 aa19.15■□□□□ 0.66
PDLIM7-210ENST00000503827 ZNF214Q9UL59 606 aaPredicted RBP19.15■□□□□ 0.66
PDLIM7-210ENST00000503827 ERC2O15083 957 aa19.14■□□□□ 0.65
PDLIM7-210ENST00000503827 AKR1B1P15121 316 aa19.14■□□□□ 0.65
PDLIM7-210ENST00000503827 GNASQ5JWF2 1037 aa19.14■□□□□ 0.65
PDLIM7-210ENST00000503827 TMEM31Q5JXX7 168 aa19.14■□□□□ 0.65
PDLIM7-210ENST00000503827 MAMDC4Q6UXC1 1216 aa19.14■□□□□ 0.65
PDLIM7-210ENST00000503827 OTOP2Q7RTS6 562 aa19.14■□□□□ 0.65
PDLIM7-210ENST00000503827 PPP1R9AQ9ULJ8 1098 aa19.14■□□□□ 0.65
PDLIM7-210ENST00000503827 IPO8O15397 1037 aaKnown RBP19.13■□□□□ 0.65
PDLIM7-210ENST00000503827 CD4P01730 458 aa19.13■□□□□ 0.65
PDLIM7-210ENST00000503827 GJA9P57773 515 aa19.13■□□□□ 0.65
PDLIM7-210ENST00000503827 IRX5P78411 483 aaPredicted RBP19.13■□□□□ 0.65
PDLIM7-210ENST00000503827 ACVR2BQ13705 512 aa19.13■□□□□ 0.65
PDLIM7-210ENST00000503827 SSH3Q8TE77 659 aa19.13■□□□□ 0.65
PDLIM7-210ENST00000503827 UPF3AQ9H1J1 476 aaKnown RBP19.13■□□□□ 0.65
PDLIM7-210ENST00000503827 BAZ2AQ9UIF9 1905 aaKnown RBP19.12■□□□□ 0.65
PDLIM7-210ENST00000503827 RABGGTBP53611 331 aa19.12■□□□□ 0.65
PDLIM7-210ENST00000503827 SDR42E1Q8WUS8 393 aa19.12■□□□□ 0.65
PDLIM7-210ENST00000503827 EAF2Q96CJ1 260 aaPredicted RBP19.12■□□□□ 0.65
PDLIM7-210ENST00000503827 CCDC17Q96LX7 622 aa19.12■□□□□ 0.65
PDLIM7-210ENST00000503827 ABHD16BQ9H3Z7 469 aa19.12■□□□□ 0.65
PDLIM7-210ENST00000503827 HIPK3Q9H422 1215 aa19.12■□□□□ 0.65
PDLIM7-210ENST00000503827 DCP1AQ9NPI6 582 aaPredicted RBP19.12■□□□□ 0.65
PDLIM7-210ENST00000503827 PCDHA11Q9Y5I1 949 aa19.12■□□□□ 0.65
PDLIM7-210ENST00000503827 SLC4A7Q9Y6M7 1214 aa19.12■□□□□ 0.65
PDLIM7-210ENST00000503827 LRRC37A2A6NM11 1700 aa19.11■□□□□ 0.65
PDLIM7-210ENST00000503827 GTPBP6O43824 516 aaPredicted RBP19.11■□□□□ 0.65
PDLIM7-210ENST00000503827 RAD21O60216 631 aa19.11■□□□□ 0.65
PDLIM7-210ENST00000503827 CYP2D6P10635 497 aa19.11■□□□□ 0.65
PDLIM7-210ENST00000503827 ATP8B2P98198 1209 aa19.11■□□□□ 0.65
PDLIM7-210ENST00000503827 CCDC144BQ3MJ40 725 aa19.11■□□□□ 0.65
PDLIM7-210ENST00000503827 ZNF467Q7Z7K2 595 aaPredicted RBP19.11■□□□□ 0.65
PDLIM7-210ENST00000503827 REPS2Q8NFH8 660 aa19.11■□□□□ 0.65
PDLIM7-210ENST00000503827 DYNLL2Q96FJ2 89 aa19.11■□□□□ 0.65
PDLIM7-210ENST00000503827 TEX13BQ9BXU2 312 aa19.11■□□□□ 0.65
PDLIM7-210ENST00000503827 GOPCQ9HD26 462 aa19.11■□□□□ 0.65
PDLIM7-210ENST00000503827 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.11■□□□□ 0.65
PDLIM7-210ENST00000503827 DNAJC25-GNG10A0A024R161 153 aa19.1■□□□□ 0.65
PDLIM7-210ENST00000503827 BCAR3O75815 825 aa19.1■□□□□ 0.65
PDLIM7-210ENST00000503827 EEF2P13639 858 aaKnown RBP19.1■□□□□ 0.65
PDLIM7-210ENST00000503827 TRIM27P14373 513 aa19.1■□□□□ 0.65
PDLIM7-210ENST00000503827 TTF1Q15361 905 aaPredicted RBP19.1■□□□□ 0.65
PDLIM7-210ENST00000503827 SLC9C2Q5TAH2 1124 aa19.1■□□□□ 0.65
PDLIM7-210ENST00000503827 SNRNP48Q6IEG0 339 aaKnown RBP19.1■□□□□ 0.65
PDLIM7-210ENST00000503827 RPUSD2Q8IZ73 545 aaKnown RBP19.1■□□□□ 0.65
PDLIM7-210ENST00000503827 COG5Q9UP83 839 aa19.1■□□□□ 0.65
PDLIM7-210ENST00000503827 NOP58Q9Y2X3 529 aaKnown RBP19.1■□□□□ 0.65
PDLIM7-210ENST00000503827 REV3LO60673 3130 aa19.1■□□□□ 0.65
PDLIM7-210ENST00000503827 CHD7Q9P2D1 2997 aa19.09■□□□□ 0.65
PDLIM7-210ENST00000503827 ADCY6O43306 1168 aa19.09■□□□□ 0.65
PDLIM7-210ENST00000503827 MYOGP15173 224 aa19.09■□□□□ 0.65
PDLIM7-210ENST00000503827 CCL23P55773 120 aa19.09■□□□□ 0.65
PDLIM7-210ENST00000503827 FAM83BQ5T0W9 1011 aa19.09■□□□□ 0.65
PDLIM7-210ENST00000503827 KANSL2Q9H9L4 492 aa19.09■□□□□ 0.65
PDLIM7-210ENST00000503827 PRRC2BQ5JSZ5 2229 aaKnown RBP19.09■□□□□ 0.65
PDLIM7-210ENST00000503827 UMODL1Q5DID0 1318 aa19.08■□□□□ 0.65
PDLIM7-210ENST00000503827 ZBBXA8MT70 800 aa19.08■□□□□ 0.64
PDLIM7-210ENST00000503827 PDE6AP16499 860 aa19.08■□□□□ 0.64
PDLIM7-210ENST00000503827 POU3F3P20264 500 aaPredicted RBP19.08■□□□□ 0.64
PDLIM7-210ENST00000503827 CLUAP1Q96AJ1 413 aa19.08■□□□□ 0.64
PDLIM7-210ENST00000503827 MTCH2Q9Y6C9 303 aa19.08■□□□□ 0.64
PDLIM7-210ENST00000503827 ZNF532Q9HCE3 1301 aa19.07■□□□□ 0.64
PDLIM7-210ENST00000503827 GPR37L1O60883 481 aa19.07■□□□□ 0.64
PDLIM7-210ENST00000503827 CABYRO75952 493 aa19.07■□□□□ 0.64
PDLIM7-210ENST00000503827 ATP2A2P16615 1042 aaKnown RBP19.07■□□□□ 0.64
PDLIM7-210ENST00000503827 SLC4A3P48751 1232 aa19.07■□□□□ 0.64
PDLIM7-210ENST00000503827 CDK8P49336 464 aa19.07■□□□□ 0.64
PDLIM7-210ENST00000503827 AMOTL1Q8IY63 956 aa19.07■□□□□ 0.64
PDLIM7-210ENST00000503827 LCORLQ8N3X6 602 aa19.07■□□□□ 0.64
PDLIM7-210ENST00000503827 SLC43A3Q8NBI5 491 aa19.07■□□□□ 0.64
PDLIM7-210ENST00000503827 FRAT1Q92837 279 aaPredicted RBP19.07■□□□□ 0.64
PDLIM7-210ENST00000503827 SLF1Q9BQI6 1058 aa19.07■□□□□ 0.64
PDLIM7-210ENST00000503827 SEZ6LQ9BYH1 1024 aa19.07■□□□□ 0.64
PDLIM7-210ENST00000503827 TNNQ9UQP3 1299 aa19.07■□□□□ 0.64
PDLIM7-210ENST00000503827 RIPK3Q9Y572 518 aa19.07■□□□□ 0.64
PDLIM7-210ENST00000503827 TLL1O43897 1013 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms