RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 STK31Q9BXU1 1019 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 TRIM6Q9C030 488 aaPredicted RBP3.18□□□□□ -1.9
NEDD4-204ENST00000503468 TMEM63CQ9P1W3 806 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 CLIP2Q9UDT6 1046 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 LRRFIP2Q9Y608 721 aaKnown RBP3.18□□□□□ -1.9
NEDD4-204ENST00000503468 FAM92AA1XBS5 289 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 SOBPA7XYQ1 873 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 HIP1O00291 1037 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 CES2O00748 559 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 H2AFXP16104 143 aaPredicted RBP3.18□□□□□ -1.9
NEDD4-204ENST00000503468 SFPQP23246 707 aaKnown RBP eCLIP3.18□□□□□ -1.9
NEDD4-204ENST00000503468 MRPL19P49406 292 aaKnown RBP3.18□□□□□ -1.9
NEDD4-204ENST00000503468 CDR1P51861 262 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 LRRFIP1Q32MZ4 808 aaKnown RBP3.18□□□□□ -1.9
NEDD4-204ENST00000503468 RASIP1Q5U651 963 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 LRCH2Q5VUJ6 765 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 CEP135Q66GS9 1140 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 NYAP1Q6ZVC0 841 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 CCDC186Q7Z3E2 898 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 CEP57L1Q8IYX8 460 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 ARFGAP2Q8N6H7 521 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 TTC12Q9H892 705 aaPredicted RBP3.18□□□□□ -1.9
NEDD4-204ENST00000503468 INCENPQ9NQS7 918 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 VGLL3A8MV65 326 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 ERC2O15083 957 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 KIAA0754O94854 1291 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 IL1BP01584 269 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 EZRP15311 586 aaKnown RBP3.18□□□□□ -1.9
NEDD4-204ENST00000503468 RXRBP28702 533 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 PRELPP51888 382 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 SNRPFP62306 86 aaKnown RBP3.18□□□□□ -1.9
NEDD4-204ENST00000503468 KIF4BQ2VIQ3 1234 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 CCDC158Q5M9N0 1113 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 FAM91A1Q658Y4 838 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 B4GALNT4Q76KP1 1039 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 DNAJC10Q8IXB1 793 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 APPBP2Q92624 585 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 SUCLG2Q96I99 432 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 RPGRIP1Q96KN7 1286 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 SPATS2LQ9NUQ6 558 aaKnown RBP3.18□□□□□ -1.9
NEDD4-204ENST00000503468 RRP15Q9Y3B9 282 aaKnown RBP3.18□□□□□ -1.9
NEDD4-204ENST00000503468 MYCNP04198 464 aaPredicted RBP3.17□□□□□ -1.9
NEDD4-204ENST00000503468 TCF3P15923 654 aa3.17□□□□□ -1.9
NEDD4-204ENST00000503468 PRLRP16471 622 aa3.17□□□□□ -1.9
NEDD4-204ENST00000503468 SDSP20132 328 aa3.17□□□□□ -1.9
NEDD4-204ENST00000503468 CST5P28325 142 aaPredicted RBP3.17□□□□□ -1.9
NEDD4-204ENST00000503468 HSD17B4P51659 736 aa3.17□□□□□ -1.9
NEDD4-204ENST00000503468 C5orf22Q49AR2 442 aa3.17□□□□□ -1.9
NEDD4-204ENST00000503468 CCDC38Q502W7 563 aa3.17□□□□□ -1.9
NEDD4-204ENST00000503468 ANKRD13DQ6ZTN6 518 aa3.17□□□□□ -1.9
NEDD4-204ENST00000503468 SHCBP1Q8NEM2 672 aa3.17□□□□□ -1.9
NEDD4-204ENST00000503468 HNRNPLLQ8WVV9 542 aaKnown RBP3.17□□□□□ -1.9
NEDD4-204ENST00000503468 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.17□□□□□ -1.9
NEDD4-204ENST00000503468 PIK3R5Q8WYR1 880 aa3.17□□□□□ -1.9
NEDD4-204ENST00000503468 RUBCNQ92622 972 aa3.17□□□□□ -1.9
NEDD4-204ENST00000503468 SUDS3Q9H7L9 328 aaPredicted RBP3.17□□□□□ -1.9
NEDD4-204ENST00000503468 HOMER3Q9NSC5 361 aa3.17□□□□□ -1.9
NEDD4-204ENST00000503468 MYO16Q9Y6X6 1858 aa3.17□□□□□ -1.9
NEDD4-204ENST00000503468 SOCS7O14512 581 aa3.17□□□□□ -1.9
NEDD4-204ENST00000503468 DHX15O43143 795 aaKnown RBP3.17□□□□□ -1.9
NEDD4-204ENST00000503468 FOXO3O43524 673 aa3.17□□□□□ -1.9
NEDD4-204ENST00000503468 SEC24BO95487 1268 aa3.17□□□□□ -1.9
NEDD4-204ENST00000503468 TNNI3KQ59H18 835 aa3.17□□□□□ -1.9
NEDD4-204ENST00000503468 TBC1D9Q6ZT07 1266 aa3.17□□□□□ -1.9
NEDD4-204ENST00000503468 EGFL6Q8IUX8 553 aa3.17□□□□□ -1.9
NEDD4-204ENST00000503468 LPIN2Q92539 896 aa3.17□□□□□ -1.9
NEDD4-204ENST00000503468 TAF4BQ92750 862 aa3.17□□□□□ -1.9
NEDD4-204ENST00000503468 GTF3C6Q969F1 213 aa3.17□□□□□ -1.9
NEDD4-204ENST00000503468 EVI5LQ96CN4 794 aa3.17□□□□□ -1.9
NEDD4-204ENST00000503468 FAM84BQ96KN1 310 aaPredicted RBP3.17□□□□□ -1.9
NEDD4-204ENST00000503468 NUP62CLQ9H1M0 184 aa3.17□□□□□ -1.9
NEDD4-204ENST00000503468 ABCB6Q9NP58 842 aa3.17□□□□□ -1.9
NEDD4-204ENST00000503468 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.17□□□□□ -1.9
NEDD4-204ENST00000503468 ZNF215Q9UL58 517 aaPredicted RBP3.17□□□□□ -1.9
NEDD4-204ENST00000503468 FPGT-TNNI3KV9GXZ4 949 aa3.17□□□□□ -1.9
NEDD4-204ENST00000503468 GOLGA6L7A0A1B0GV03 622 aa3.17□□□□□ -1.9
NEDD4-204ENST00000503468 KBTBD13C9JR72 458 aa3.17□□□□□ -1.9
NEDD4-204ENST00000503468 C21orf2O43822 256 aa3.17□□□□□ -1.9
NEDD4-204ENST00000503468 PDE8AO60658 829 aa3.17□□□□□ -1.9
NEDD4-204ENST00000503468 PNMA6AP0CW24 399 aaPredicted RBP3.17□□□□□ -1.9
NEDD4-204ENST00000503468 TRAF1Q13077 416 aa3.17□□□□□ -1.9
NEDD4-204ENST00000503468 PDIA5Q14554 519 aa3.17□□□□□ -1.9
NEDD4-204ENST00000503468 C12orf60Q5U649 245 aa3.17□□□□□ -1.9
NEDD4-204ENST00000503468 CCDC70Q6NSX1 233 aa3.17□□□□□ -1.9
NEDD4-204ENST00000503468 MAMSTRQ6ZN01 415 aa3.17□□□□□ -1.9
NEDD4-204ENST00000503468 TADA2BQ86TJ2 420 aa3.17□□□□□ -1.9
NEDD4-204ENST00000503468 MRRFQ96E11 262 aaKnown RBP3.17□□□□□ -1.9
NEDD4-204ENST00000503468 ANKRD27Q96NW4 1050 aa3.17□□□□□ -1.9
NEDD4-204ENST00000503468 RETREG1Q9H6L5 497 aa3.17□□□□□ -1.9
NEDD4-204ENST00000503468 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.17□□□□□ -1.97e-8■■■■■ 186.3
NEDD4-204ENST00000503468 DNAI1Q9UI46 699 aa3.17□□□□□ -1.9
NEDD4-204ENST00000503468 ST14Q9Y5Y6 855 aa3.17□□□□□ -1.9
NEDD4-204ENST00000503468 CD2BP2O95400 341 aaKnown RBP3.17□□□□□ -1.9
NEDD4-204ENST00000503468 C1QAP02745 245 aa3.17□□□□□ -1.9
NEDD4-204ENST00000503468 PIM1P11309 404 aaPredicted RBP3.17□□□□□ -1.9
NEDD4-204ENST00000503468 PTPREP23469 700 aa3.17□□□□□ -1.9
NEDD4-204ENST00000503468 NOP2P46087 812 aaKnown RBP3.17□□□□□ -1.9
NEDD4-204ENST00000503468 ZNF165P49910 485 aa3.17□□□□□ -1.9
NEDD4-204ENST00000503468 NLRP6P59044 892 aa3.17□□□□□ -1.9
NEDD4-204ENST00000503468 CRYMQ14894 314 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms