RNA–Protein interactions for RNA: ENST00000503388.1

NDFIP1-202, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 2

Gene NDFIP1, Length 4,164 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-202ENST00000503388 EAF2Q96CJ1 260 aaPredicted RBP5.28□□□□□ -1.56
NDFIP1-202ENST00000503388 PANX2Q96RD6 677 aa5.28□□□□□ -1.56
NDFIP1-202ENST00000503388 ZSCAN10Q96SZ4 725 aaPredicted RBP5.28□□□□□ -1.56
NDFIP1-202ENST00000503388 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.28□□□□□ -1.56
NDFIP1-202ENST00000503388 NOC4LQ9BVI4 516 aaKnown RBP5.28□□□□□ -1.56
NDFIP1-202ENST00000503388 AS3MTQ9HBK9 375 aa5.28□□□□□ -1.56
NDFIP1-202ENST00000503388 TYW1Q9NV66 732 aaKnown RBP5.28□□□□□ -1.56
NDFIP1-202ENST00000503388 MRPL11Q9Y3B7 192 aaKnown RBP5.28□□□□□ -1.56
NDFIP1-202ENST00000503388 SNED1Q8TER0 1413 aa5.28□□□□□ -1.56
NDFIP1-202ENST00000503388 SEC24BO95487 1268 aa5.27□□□□□ -1.57
NDFIP1-202ENST00000503388 SCG2P13521 617 aa5.27□□□□□ -1.57
NDFIP1-202ENST00000503388 CTNNA2P26232 953 aa5.27□□□□□ -1.57
NDFIP1-202ENST00000503388 LMOD1P29536 600 aaPredicted RBP5.27□□□□□ -1.57
NDFIP1-202ENST00000503388 MATR3P43243 847 aaKnown RBP eCLIP5.27□□□□□ -1.57
NDFIP1-202ENST00000503388 CHMP4BP1P59074 171 aa5.27□□□□□ -1.57
NDFIP1-202ENST00000503388 SLC39A6Q13433 755 aa5.27□□□□□ -1.57
NDFIP1-202ENST00000503388 RABL6Q3YEC7 729 aaPredicted RBP5.27□□□□□ -1.57
NDFIP1-202ENST00000503388 GLE1Q53GS7 698 aaKnown RBP5.27□□□□□ -1.57
NDFIP1-202ENST00000503388 WDR44Q5JSH3 913 aa5.27□□□□□ -1.57
NDFIP1-202ENST00000503388 TCERG1LQ5VWI1 586 aa5.27□□□□□ -1.57
NDFIP1-202ENST00000503388 IFNL3Q8IZI9 196 aa5.27□□□□□ -1.57
NDFIP1-202ENST00000503388 PROM2Q8N271 834 aa5.27□□□□□ -1.57
NDFIP1-202ENST00000503388 CSGALNACT2Q8N6G5 542 aa5.27□□□□□ -1.57
NDFIP1-202ENST00000503388 CCHCR1Q8TD31 782 aa5.27□□□□□ -1.57
NDFIP1-202ENST00000503388 CDHR1Q96JP9 859 aa5.27□□□□□ -1.57
NDFIP1-202ENST00000503388 RASSF4Q9H2L5 321 aa5.27□□□□□ -1.57
NDFIP1-202ENST00000503388 GINM1Q9NU53 330 aa5.27□□□□□ -1.57
NDFIP1-202ENST00000503388 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.27□□□□□ -1.57
NDFIP1-202ENST00000503388 XDHP47989 1333 aa5.27□□□□□ -1.57
NDFIP1-202ENST00000503388 SPATA31A3Q5VYP0 1347 aa5.27□□□□□ -1.57
NDFIP1-202ENST00000503388 ZNF532Q9HCE3 1301 aa5.27□□□□□ -1.57
NDFIP1-202ENST00000503388 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.27□□□□□ -1.57
NDFIP1-202ENST00000503388 ADD2P35612 726 aa5.27□□□□□ -1.57
NDFIP1-202ENST00000503388 ASIC2Q16515 512 aa5.27□□□□□ -1.57
NDFIP1-202ENST00000503388 ME3Q16798 604 aa5.27□□□□□ -1.57
NDFIP1-202ENST00000503388 CCDC122Q5T0U0 273 aa5.27□□□□□ -1.57
NDFIP1-202ENST00000503388 OTUD6AQ7L8S5 288 aa5.27□□□□□ -1.57
NDFIP1-202ENST00000503388 NLRX1Q86UT6 975 aa5.27□□□□□ -1.57
NDFIP1-202ENST00000503388 NLGN1Q8N2Q7 840 aa5.27□□□□□ -1.57
NDFIP1-202ENST00000503388 CTNNBL1Q8WYA6 563 aaPredicted RBP5.27□□□□□ -1.57
NDFIP1-202ENST00000503388 P3H4Q92791 437 aa5.27□□□□□ -1.57
NDFIP1-202ENST00000503388 CNKSR1Q969H4 720 aa5.27□□□□□ -1.57
NDFIP1-202ENST00000503388 THAP9Q9H5L6 903 aa5.27□□□□□ -1.57
NDFIP1-202ENST00000503388 GDPD2Q9HCC8 539 aa5.27□□□□□ -1.57
NDFIP1-202ENST00000503388 LRWD1Q9UFC0 647 aa5.27□□□□□ -1.57
NDFIP1-202ENST00000503388 NFE2L3Q9Y4A8 694 aa5.27□□□□□ -1.57
NDFIP1-202ENST00000503388 JCADQ9P266 1359 aa5.27□□□□□ -1.57
NDFIP1-202ENST00000503388 PARP14Q460N5 1801 aa5.27□□□□□ -1.57
NDFIP1-202ENST00000503388 MYO3BQ8WXR4 1341 aa5.27□□□□□ -1.57
NDFIP1-202ENST00000503388 NUTM2BA6NNL0 878 aaPredicted RBP5.27□□□□□ -1.57
NDFIP1-202ENST00000503388 NUTM2EB1AL46 878 aaPredicted RBP5.27□□□□□ -1.57
NDFIP1-202ENST00000503388 EIF3DO15371 548 aaKnown RBP eCLIP5.27□□□□□ -1.57
NDFIP1-202ENST00000503388 PTGS1P23219 599 aa5.27□□□□□ -1.57
NDFIP1-202ENST00000503388 MAP3K9P80192 1104 aa5.27□□□□□ -1.57
NDFIP1-202ENST00000503388 LRRC63Q05C16 580 aa5.27□□□□□ -1.57
NDFIP1-202ENST00000503388 PDE4DQ08499 809 aa5.27□□□□□ -1.57
NDFIP1-202ENST00000503388 PABPC4Q13310 644 aaKnown RBP eCLIP5.27□□□□□ -1.573e-9■□□□□ 10.3
NDFIP1-202ENST00000503388 DCAF15Q66K64 600 aa5.27□□□□□ -1.57
NDFIP1-202ENST00000503388 NEK8Q86SG6 692 aa5.27□□□□□ -1.57
NDFIP1-202ENST00000503388 SAMD3Q8N6K7 520 aa5.27□□□□□ -1.57
NDFIP1-202ENST00000503388 WDR11Q9BZH6 1224 aa5.27□□□□□ -1.57
NDFIP1-202ENST00000503388 TRIM7Q9C029 511 aa5.27□□□□□ -1.57
NDFIP1-202ENST00000503388 AATFQ9NY61 560 aaKnown RBP eCLIP5.27□□□□□ -1.57
NDFIP1-202ENST00000503388 HYOU1Q9Y4L1 999 aa5.27□□□□□ -1.57
NDFIP1-202ENST00000503388 COL4A3BPQ9Y5P4 624 aa5.27□□□□□ -1.57
NDFIP1-202ENST00000503388 PNPLA7Q6ZV29 1317 aa5.27□□□□□ -1.57
NDFIP1-202ENST00000503388 PRR36Q9H6K5 1346 aa5.27□□□□□ -1.57
NDFIP1-202ENST00000503388 CRB1P82279 1406 aa5.27□□□□□ -1.57
NDFIP1-202ENST00000503388 MYH3P11055 1940 aa5.27□□□□□ -1.57
NDFIP1-202ENST00000503388 BIN1O00499 593 aa5.26□□□□□ -1.57
NDFIP1-202ENST00000503388 GFPT2O94808 682 aa5.26□□□□□ -1.57
NDFIP1-202ENST00000503388 OR52Z1P0C646 297 aa5.26□□□□□ -1.57
NDFIP1-202ENST00000503388 SLFN14P0C7P3 912 aa5.26□□□□□ -1.57
NDFIP1-202ENST00000503388 P4HA1P13674 534 aa5.26□□□□□ -1.57
NDFIP1-202ENST00000503388 PDIA3P30101 505 aaKnown RBP5.26□□□□□ -1.57
NDFIP1-202ENST00000503388 IRX4P78413 519 aa5.26□□□□□ -1.57
NDFIP1-202ENST00000503388 RBM10P98175 930 aaKnown RBP5.26□□□□□ -1.57
NDFIP1-202ENST00000503388 AP3B2Q13367 1082 aa5.26□□□□□ -1.57
NDFIP1-202ENST00000503388 SURF1Q15526 300 aa5.26□□□□□ -1.57
NDFIP1-202ENST00000503388 CHRNA2Q15822 529 aa5.26□□□□□ -1.57
NDFIP1-202ENST00000503388 BRDTQ58F21 947 aaPredicted RBP5.26□□□□□ -1.57
NDFIP1-202ENST00000503388 CABP7Q86V35 215 aa5.26□□□□□ -1.57
NDFIP1-202ENST00000503388 MPNDQ8N594 471 aa5.26□□□□□ -1.57
NDFIP1-202ENST00000503388 MORC4Q8TE76 937 aa5.26□□□□□ -1.57
NDFIP1-202ENST00000503388 MMRN2Q9H8L6 949 aa5.26□□□□□ -1.57
NDFIP1-202ENST00000503388 ANO9A1A5B4 782 aa5.26□□□□□ -1.57
NDFIP1-202ENST00000503388 POLD1P28340 1107 aa5.26□□□□□ -1.57
NDFIP1-202ENST00000503388 RASSF2P50749 326 aa5.26□□□□□ -1.57
NDFIP1-202ENST00000503388 MAP7Q14244 749 aa5.26□□□□□ -1.57
NDFIP1-202ENST00000503388 ZNF569Q5MCW4 686 aa5.26□□□□□ -1.57
NDFIP1-202ENST00000503388 UTP14CQ5TAP6 766 aaKnown RBP5.26□□□□□ -1.57
NDFIP1-202ENST00000503388 ZC3H15Q8WU90 426 aaKnown RBP5.26□□□□□ -1.57
NDFIP1-202ENST00000503388 STAG1Q8WVM7 1258 aa5.26□□□□□ -1.57
NDFIP1-202ENST00000503388 JDP2Q8WYK2 163 aa5.26□□□□□ -1.57
NDFIP1-202ENST00000503388 TIPINQ9BVW5 301 aa5.26□□□□□ -1.57
NDFIP1-202ENST00000503388 LGR6Q9HBX8 967 aa5.26□□□□□ -1.57
NDFIP1-202ENST00000503388 TRMT1Q9NXH9 659 aaKnown RBP5.26□□□□□ -1.57
NDFIP1-202ENST00000503388 TMEM63CQ9P1W3 806 aa5.26□□□□□ -1.57
NDFIP1-202ENST00000503388 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.26□□□□□ -1.57
NDFIP1-202ENST00000503388 SRPRBQ9Y5M8 271 aaKnown RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms