RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 FBXO3Q9UK99 471 aa6.18□□□□□ -1.42
HTT-202ENST00000502820 GAKO14976 1311 aa6.18□□□□□ -1.42
HTT-202ENST00000502820 SYNRGQ9UMZ2 1314 aa6.18□□□□□ -1.42
HTT-202ENST00000502820 MAST2Q6P0Q8 1798 aa6.18□□□□□ -1.42
HTT-202ENST00000502820 LTBP2Q14767 1821 aa6.18□□□□□ -1.42
HTT-202ENST00000502820 RFX7Q2KHR2 1363 aa6.18□□□□□ -1.42
HTT-202ENST00000502820 GPR75-ASB3A0A0A6YYF3 556 aa6.17□□□□□ -1.42
HTT-202ENST00000502820 A0A0U1RQG5 324 aaPredicted RBP6.17□□□□□ -1.42
HTT-202ENST00000502820 MOXD2PA6NHM9 499 aa6.17□□□□□ -1.42
HTT-202ENST00000502820 SPDYE16A6NNV3 312 aaPredicted RBP6.17□□□□□ -1.42
HTT-202ENST00000502820 ARVCFO00192 962 aa6.17□□□□□ -1.42
HTT-202ENST00000502820 ZBTB22O15209 634 aa6.17□□□□□ -1.42
HTT-202ENST00000502820 CIAO1O76071 339 aa6.17□□□□□ -1.42
HTT-202ENST00000502820 CSPG5O95196 566 aa6.17□□□□□ -1.42
HTT-202ENST00000502820 LDHCP07864 332 aa6.17□□□□□ -1.42
HTT-202ENST00000502820 TRIM27P14373 513 aa6.17□□□□□ -1.42
HTT-202ENST00000502820 MCM4P33991 863 aa6.17□□□□□ -1.42
HTT-202ENST00000502820 USP14P54578 494 aa6.17□□□□□ -1.42
HTT-202ENST00000502820 CHMP4BP1P59074 171 aa6.17□□□□□ -1.42
HTT-202ENST00000502820 TIMM10P62072 90 aa6.17□□□□□ -1.42
HTT-202ENST00000502820 BEX3Q00994 111 aa6.17□□□□□ -1.42
HTT-202ENST00000502820 MTX1Q13505 466 aa6.17□□□□□ -1.42
HTT-202ENST00000502820 RASGRF1Q13972 1273 aa6.17□□□□□ -1.42
HTT-202ENST00000502820 TTLL4Q14679 1199 aa6.17□□□□□ -1.42
HTT-202ENST00000502820 KCTD2Q14681 263 aa6.17□□□□□ -1.42
HTT-202ENST00000502820 RASIP1Q5U651 963 aa6.17□□□□□ -1.42
HTT-202ENST00000502820 SPRED2Q7Z698 418 aa6.17□□□□□ -1.42
HTT-202ENST00000502820 SUGP1Q8IWZ8 645 aaKnown RBP6.17□□□□□ -1.42
HTT-202ENST00000502820 PRSS33Q8NF86 280 aa6.17□□□□□ -1.42
HTT-202ENST00000502820 PBXIP1Q96AQ6 731 aa6.17□□□□□ -1.42
HTT-202ENST00000502820 GBP4Q96PP9 640 aa6.17□□□□□ -1.42
HTT-202ENST00000502820 DHX36Q9H2U1 1008 aaKnown RBP6.17□□□□□ -1.42
HTT-202ENST00000502820 CABP5Q9NP86 173 aa6.17□□□□□ -1.42
HTT-202ENST00000502820 HOXC10Q9NYD6 342 aa6.17□□□□□ -1.42
HTT-202ENST00000502820 FAM184BQ9ULE4 1060 aa6.17□□□□□ -1.42
HTT-202ENST00000502820 SEMA3EO15041 775 aa6.16□□□□□ -1.42
HTT-202ENST00000502820 ADAMTS4O75173 837 aa6.16□□□□□ -1.42
HTT-202ENST00000502820 BCAR3O75815 825 aa6.16□□□□□ -1.42
HTT-202ENST00000502820 FLOT1O75955 427 aa6.16□□□□□ -1.42
HTT-202ENST00000502820 BAG3O95817 575 aa6.16□□□□□ -1.42
HTT-202ENST00000502820 GNAI3P08754 354 aa6.16□□□□□ -1.42
HTT-202ENST00000502820 XRCC6P12956 609 aaKnown RBP eCLIP6.16□□□□□ -1.42
HTT-202ENST00000502820 COG2Q14746 738 aa6.16□□□□□ -1.42
HTT-202ENST00000502820 CLUL1Q15846 466 aa6.16□□□□□ -1.42
HTT-202ENST00000502820 FAM117BQ6P1L5 589 aa6.16□□□□□ -1.42
HTT-202ENST00000502820 CXCL17Q6UXB2 119 aa6.16□□□□□ -1.42
HTT-202ENST00000502820 ATF7IPQ6VMQ6 1270 aa6.16□□□□□ -1.42
HTT-202ENST00000502820 TMCO2Q7Z6W1 182 aaPredicted RBP6.16□□□□□ -1.42
HTT-202ENST00000502820 ZSCAN30Q86W11 494 aa6.16□□□□□ -1.42
HTT-202ENST00000502820 FOXP4Q8IVH2 680 aaPredicted RBP6.16□□□□□ -1.42
HTT-202ENST00000502820 SPICE1Q8N0Z3 855 aa6.16□□□□□ -1.42
HTT-202ENST00000502820 PCSK9Q8NBP7 692 aaKnown RBP6.16□□□□□ -1.42
HTT-202ENST00000502820 SHCBP1Q8NEM2 672 aa6.16□□□□□ -1.42
HTT-202ENST00000502820 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.16□□□□□ -1.42
HTT-202ENST00000502820 DDX11Q96FC9 970 aa6.16□□□□□ -1.42
HTT-202ENST00000502820 TBC1D32Q96NH3 1257 aa6.16□□□□□ -1.42
HTT-202ENST00000502820 TINF2Q9BSI4 451 aa6.16□□□□□ -1.42
HTT-202ENST00000502820 TSEN34Q9BSV6 310 aaKnown RBP6.16□□□□□ -1.42
HTT-202ENST00000502820 TRPV6Q9H1D0 765 aa6.16□□□□□ -1.42
HTT-202ENST00000502820 KCNH6Q9H252 994 aa6.16□□□□□ -1.42
HTT-202ENST00000502820 MROH8Q9H579 483 aa6.16□□□□□ -1.42
HTT-202ENST00000502820 GRPEL1Q9HAV7 217 aa6.16□□□□□ -1.42
HTT-202ENST00000502820 COPRSQ9NQ92 184 aa6.16□□□□□ -1.42
HTT-202ENST00000502820 MUTYHQ9UIF7 546 aa6.16□□□□□ -1.42
HTT-202ENST00000502820 HDAC5Q9UQL6 1122 aa6.16□□□□□ -1.42
HTT-202ENST00000502820 TNNQ9UQP3 1299 aa6.16□□□□□ -1.42
HTT-202ENST00000502820 SALL1Q9NSC2 1324 aa6.16□□□□□ -1.42
HTT-202ENST00000502820 H0Y858 1186 aa6.15□□□□□ -1.42
HTT-202ENST00000502820 GOLGA6L22H0YM25 854 aa6.15□□□□□ -1.42
HTT-202ENST00000502820 DYNC1I1O14576 645 aa6.15□□□□□ -1.42
HTT-202ENST00000502820 IPO8O15397 1037 aaKnown RBP6.15□□□□□ -1.42
HTT-202ENST00000502820 KDM4AO75164 1064 aa6.15□□□□□ -1.42
HTT-202ENST00000502820 OFD1O75665 1012 aa6.15□□□□□ -1.42
HTT-202ENST00000502820 ARHGEF15O94989 841 aa6.15□□□□□ -1.42
HTT-202ENST00000502820 KIF20AO95235 890 aa6.15□□□□□ -1.42
HTT-202ENST00000502820 ACTN1P12814 892 aa6.15□□□□□ -1.42
HTT-202ENST00000502820 IL15P40933 162 aaPredicted RBP6.15□□□□□ -1.42
HTT-202ENST00000502820 USP5P45974 858 aa6.15□□□□□ -1.42
HTT-202ENST00000502820 ID4P47928 161 aa6.15□□□□□ -1.42
HTT-202ENST00000502820 PSMC6P62333 389 aa6.15□□□□□ -1.42
HTT-202ENST00000502820 TAP1Q03518 808 aa6.15□□□□□ -1.42
HTT-202ENST00000502820 ABCB5Q2M3G0 1257 aa6.15□□□□□ -1.42
HTT-202ENST00000502820 CERKLQ49MI3 558 aaPredicted RBP6.15□□□□□ -1.42
HTT-202ENST00000502820 FAM47CQ5HY64 1035 aa6.15□□□□□ -1.42
HTT-202ENST00000502820 PI16Q6UXB8 463 aa6.15□□□□□ -1.42
HTT-202ENST00000502820 LBX2Q6XYB7 198 aa6.15□□□□□ -1.42
HTT-202ENST00000502820 FAM126BQ8IXS8 530 aa6.15□□□□□ -1.42
HTT-202ENST00000502820 PPP1R13LQ8WUF5 828 aa6.15□□□□□ -1.42
HTT-202ENST00000502820 ATG4CQ96DT6 458 aa6.15□□□□□ -1.42
HTT-202ENST00000502820 FAM163AQ96GL9 167 aaPredicted RBP6.15□□□□□ -1.42
HTT-202ENST00000502820 PPP1R9BQ96SB3 815 aa6.15□□□□□ -1.42
HTT-202ENST00000502820 UPF3BQ9BZI7 483 aaKnown RBP6.15□□□□□ -1.42
HTT-202ENST00000502820 DNAJC18Q9H819 358 aa6.15□□□□□ -1.42
HTT-202ENST00000502820 TLR9Q9NR96 1032 aa6.15□□□□□ -1.42
HTT-202ENST00000502820 SNRKQ9NRH2 765 aa6.15□□□□□ -1.42
HTT-202ENST00000502820 PA2G4Q9UQ80 394 aaKnown RBP6.15□□□□□ -1.42
HTT-202ENST00000502820 PLXNB2O15031 1838 aa6.15□□□□□ -1.43
HTT-202ENST00000502820 DOCK3Q8IZD9 2030 aa6.15□□□□□ -1.43
HTT-202ENST00000502820 LCHNA4D1U4 455 aa6.14□□□□□ -1.43
HTT-202ENST00000502820 B4GALT4O60513 344 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms