RNA–Protein interactions for RNA: ENST00000502816.1

TRIO-204, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 736 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-204ENST00000502816 SLC38A10Q9HBR0 1119 aa29.33■■■□□ 2.29
TRIO-204ENST00000502816 SLC5A4Q9NY91 659 aa29.33■■■□□ 2.29
TRIO-204ENST00000502816 STX8Q9UNK0 236 aa29.33■■■□□ 2.29
TRIO-204ENST00000502816 SAMD1Q6SPF0 538 aaPredicted RBP29.32■■■□□ 2.28
TRIO-204ENST00000502816 MFSD6Q6ZSS7 791 aa29.32■■■□□ 2.28
TRIO-204ENST00000502816 RNF41Q9H4P4 317 aaPredicted RBP29.32■■■□□ 2.28
TRIO-204ENST00000502816 OAZ1P54368 228 aa29.31■■■□□ 2.28
TRIO-204ENST00000502816 HAND2P61296 217 aa29.31■■■□□ 2.28
TRIO-204ENST00000502816 LHX8Q68G74 356 aa29.31■■■□□ 2.28
TRIO-204ENST00000502816 PLXNA1Q9UIW2 1896 aa29.3■■■□□ 2.28
TRIO-204ENST00000502816 FRMPD3Q5JV73 1810 aa29.3■■■□□ 2.28
TRIO-204ENST00000502816 ZNF213O14771 459 aa29.3■■■□□ 2.28
TRIO-204ENST00000502816 ZBED4O75132 1171 aa29.3■■■□□ 2.28
TRIO-204ENST00000502816 CCND3P30281 292 aaPredicted RBP29.3■■■□□ 2.28
TRIO-204ENST00000502816 MNX1P50219 401 aaPredicted RBP29.3■■■□□ 2.28
TRIO-204ENST00000502816 RCSD1Q6JBY9 416 aa29.3■■■□□ 2.28
TRIO-204ENST00000502816 FAM160B2Q86V87 743 aa29.3■■■□□ 2.28
TRIO-204ENST00000502816 TBC1D10CQ8IV04 446 aa29.3■■■□□ 2.28
TRIO-204ENST00000502816 CHURC1Q8WUH1 139 aa29.3■■■□□ 2.28
TRIO-204ENST00000502816 TTC14Q96N46 770 aa29.3■■■□□ 2.28
TRIO-204ENST00000502816 DIS3Q9Y2L1 958 aaKnown RBP29.3■■■□□ 2.28
TRIO-204ENST00000502816 RAD50Q92878 1312 aa29.29■■■□□ 2.28
TRIO-204ENST00000502816 SLC1A4P43007 532 aa29.29■■■□□ 2.28
TRIO-204ENST00000502816 KIFC2Q96AC6 838 aa29.29■■■□□ 2.28
TRIO-204ENST00000502816 IL25Q9H293 177 aa29.29■■■□□ 2.28
TRIO-204ENST00000502816 TMEM232C9JQI7 657 aa29.28■■■□□ 2.28
TRIO-204ENST00000502816 MCCP23508 829 aa29.28■■■□□ 2.28
TRIO-204ENST00000502816 STAT2P52630 851 aa29.28■■■□□ 2.28
TRIO-204ENST00000502816 MAML3Q96JK9 1138 aa29.28■■■□□ 2.28
TRIO-204ENST00000502816 MMP19Q99542 508 aa29.28■■■□□ 2.28
TRIO-204ENST00000502816 HTATIP2Q9BUP3 242 aa29.28■■■□□ 2.28
TRIO-204ENST00000502816 CTNNA3Q9UI47 895 aa29.28■■■□□ 2.28
TRIO-204ENST00000502816 TOP1P11387 765 aaKnown RBP29.27■■■□□ 2.28
TRIO-204ENST00000502816 ZNF792Q3KQV3 632 aa29.27■■■□□ 2.28
TRIO-204ENST00000502816 RRP12Q5JTH9 1297 aaKnown RBP29.27■■■□□ 2.28
TRIO-204ENST00000502816 SNRNP48Q6IEG0 339 aaKnown RBP29.27■■■□□ 2.28
TRIO-204ENST00000502816 TMEM47Q9BQJ4 181 aa29.27■■■□□ 2.28
TRIO-204ENST00000502816 TOMM22Q9NS69 142 aa29.27■■■□□ 2.28
TRIO-204ENST00000502816 RIPK3Q9Y572 518 aa29.27■■■□□ 2.28
TRIO-204ENST00000502816 CYBAP13498 195 aa29.26■■■□□ 2.27
TRIO-204ENST00000502816 CHMLP26374 656 aa29.26■■■□□ 2.27
TRIO-204ENST00000502816 CYP2C19P33261 490 aa29.26■■■□□ 2.27
TRIO-204ENST00000502816 KCTD2Q14681 263 aa29.26■■■□□ 2.27
TRIO-204ENST00000502816 DCAF4Q8WV16 495 aa29.26■■■□□ 2.27
TRIO-204ENST00000502816 ESR2Q92731 530 aa29.26■■■□□ 2.27
TRIO-204ENST00000502816 MSCO60682 206 aa29.25■■■□□ 2.27
TRIO-204ENST00000502816 NECAB2Q7Z6G3 386 aa29.25■■■□□ 2.27
TRIO-204ENST00000502816 TRPV1Q8NER1 839 aa29.25■■■□□ 2.27
TRIO-204ENST00000502816 PAWRQ96IZ0 340 aaKnown RBP29.25■■■□□ 2.27
TRIO-204ENST00000502816 NEDD4P46934 1319 aa29.24■■■□□ 2.27
TRIO-204ENST00000502816 BTNL9Q6UXG8 535 aa29.24■■■□□ 2.27
TRIO-204ENST00000502816 CHST13Q8NET6 341 aa29.24■■■□□ 2.27
TRIO-204ENST00000502816 RUFY2Q8WXA3 655 aa29.24■■■□□ 2.27
TRIO-204ENST00000502816 RAVER2Q9HCJ3 691 aaKnown RBP29.24■■■□□ 2.27
TRIO-204ENST00000502816 NRBP1Q9UHY1 535 aa29.24■■■□□ 2.27
TRIO-204ENST00000502816 ZNF536O15090 1300 aa29.23■■■□□ 2.27
TRIO-204ENST00000502816 DNAJC25-GNG10A0A024R161 153 aa29.23■■■□□ 2.27
TRIO-204ENST00000502816 IMMTQ16891 758 aaKnown RBP29.23■■■□□ 2.27
TRIO-204ENST00000502816 KCTD1Q719H9 257 aa29.23■■■□□ 2.27
TRIO-204ENST00000502816 DGKHQ86XP1 1220 aa29.23■■■□□ 2.27
TRIO-204ENST00000502816 CPXCR1Q8N123 301 aa29.23■■■□□ 2.27
TRIO-204ENST00000502816 FBXO40Q9UH90 709 aa29.23■■■□□ 2.27
TRIO-204ENST00000502816 DDX20Q9UHI6 824 aaKnown RBP29.23■■■□□ 2.27
TRIO-204ENST00000502816 ALPK3Q96L96 1907 aa29.22■■■□□ 2.27
TRIO-204ENST00000502816 DIS3LQ8TF46 1054 aaKnown RBP29.22■■■□□ 2.27
TRIO-204ENST00000502816 ANKS1AQ92625 1134 aa29.22■■■□□ 2.27
TRIO-204ENST00000502816 CTDP1Q9Y5B0 961 aaPredicted RBP29.22■■■□□ 2.27
TRIO-204ENST00000502816 PGK2P07205 417 aa29.21■■■□□ 2.27
TRIO-204ENST00000502816 SNHG28P0DPA3 235 aa29.21■■■□□ 2.27
TRIO-204ENST00000502816 CCDC178Q5BJE1 867 aa29.21■■■□□ 2.27
TRIO-204ENST00000502816 MSL3Q8N5Y2 521 aaKnown RBP29.21■■■□□ 2.27
TRIO-204ENST00000502816 PRR12Q9ULL5 1215 aa29.21■■■□□ 2.27
TRIO-204ENST00000502816 COL6A1P12109 1028 aa29.2■■■□□ 2.26
TRIO-204ENST00000502816 DPF3Q92784 378 aa29.2■■■□□ 2.26
TRIO-204ENST00000502816 TINF2Q9BSI4 451 aa29.2■■■□□ 2.26
TRIO-204ENST00000502816 SGSM2O43147 1006 aa29.19■■■□□ 2.26
TRIO-204ENST00000502816 SEPT4O43236 478 aa29.19■■■□□ 2.26
TRIO-204ENST00000502816 PDHBP11177 359 aa29.19■■■□□ 2.26
TRIO-204ENST00000502816 TKFCQ3LXA3 575 aa29.19■■■□□ 2.26
TRIO-204ENST00000502816 MAMDC4Q6UXC1 1216 aa29.19■■■□□ 2.26
TRIO-204ENST00000502816 CENPQQ7L2Z9 268 aaPredicted RBP29.19■■■□□ 2.26
TRIO-204ENST00000502816 RASGRP2Q7LDG7 609 aa29.19■■■□□ 2.26
TRIO-204ENST00000502816 KDM4AO75164 1064 aa29.18■■■□□ 2.26
TRIO-204ENST00000502816 ZNF467Q7Z7K2 595 aaPredicted RBP29.18■■■□□ 2.26
TRIO-204ENST00000502816 IQCA1Q86XH1 822 aa29.18■■■□□ 2.26
TRIO-204ENST00000502816 KRT23Q9C075 422 aa29.18■■■□□ 2.26
TRIO-204ENST00000502816 C11orf49Q9H6J7 331 aa29.18■■■□□ 2.26
TRIO-204ENST00000502816 CNNM2Q9H8M5 875 aa29.18■■■□□ 2.26
TRIO-204ENST00000502816 ZSWIM5Q9P217 1185 aa29.18■■■□□ 2.26
TRIO-204ENST00000502816 IKQ13123 557 aaPredicted RBP29.17■■■□□ 2.26
TRIO-204ENST00000502816 DDX11Q96FC9 970 aa29.17■■■□□ 2.26
TRIO-204ENST00000502816 RANBP17Q9H2T7 1088 aaKnown RBP29.17■■■□□ 2.26
TRIO-204ENST00000502816 CEP290O15078 2479 aa29.16■■■□□ 2.26
TRIO-204ENST00000502816 H0YGN5 161 aa29.16■■■□□ 2.26
TRIO-204ENST00000502816 CNGA1P29973 690 aa29.16■■■□□ 2.26
TRIO-204ENST00000502816 TTBK2Q6IQ55 1244 aa29.16■■■□□ 2.26
TRIO-204ENST00000502816 AGBL1Q96MI9 1066 aa29.16■■■□□ 2.26
TRIO-204ENST00000502816 NR2E3Q9Y5X4 410 aa29.16■■■□□ 2.26
TRIO-204ENST00000502816 SMCHD1A6NHR9 2005 aa29.16■■■□□ 2.26
TRIO-204ENST00000502816 SYNGAP1Q96PV0 1343 aa29.16■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 128.1 ms