RNA–Protein interactions for RNA: ENST00000502669.5

SH3TC1-206, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 1 (best)

Gene SH3TC1, Length 3,484 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-206ENST00000502669 TMEM139Q8IV31 216 aa16.9■□□□□ 0.3
SH3TC1-206ENST00000502669 ARHGEF1Q92888 912 aaKnown RBP16.9■□□□□ 0.3
SH3TC1-206ENST00000502669 CTAGE9A4FU28 777 aa16.89■□□□□ 0.29
SH3TC1-206ENST00000502669 TADA3O75528 432 aa16.89■□□□□ 0.29
SH3TC1-206ENST00000502669 EYA3Q99504 573 aa16.89■□□□□ 0.29
SH3TC1-206ENST00000502669 TMEM60Q9H2L4 133 aa16.89■□□□□ 0.29
SH3TC1-206ENST00000502669 BIN2Q9UBW5 565 aaPredicted RBP16.89■□□□□ 0.29
SH3TC1-206ENST00000502669 TECP42680 631 aa16.89■□□□□ 0.29
SH3TC1-206ENST00000502669 TXKP42681 527 aa16.89■□□□□ 0.29
SH3TC1-206ENST00000502669 CHMP4BP1P59074 171 aa16.89■□□□□ 0.29
SH3TC1-206ENST00000502669 TBX2Q13207 712 aaPredicted RBP16.89■□□□□ 0.29
SH3TC1-206ENST00000502669 GRIK5Q16478 980 aa16.89■□□□□ 0.29
SH3TC1-206ENST00000502669 TRAPPC3LQ5T215 181 aa16.89■□□□□ 0.29
SH3TC1-206ENST00000502669 SLC35F6Q8N357 371 aa16.89■□□□□ 0.29
SH3TC1-206ENST00000502669 PYM1Q9BRP8 204 aaKnown RBP16.89■□□□□ 0.29
SH3TC1-206ENST00000502669 EXOC1Q9NV70 894 aa16.89■□□□□ 0.29
SH3TC1-206ENST00000502669 ZNF446Q9NWS9 450 aa16.89■□□□□ 0.29
SH3TC1-206ENST00000502669 ADGRG1Q9Y653 693 aa16.89■□□□□ 0.29
SH3TC1-206ENST00000502669 COL1A1P02452 1464 aaPredicted RBP16.89■□□□□ 0.29
SH3TC1-206ENST00000502669 SPATA31A5Q5VU36 1347 aa16.89■□□□□ 0.29
SH3TC1-206ENST00000502669 SPATA31A7Q8IWB4 1347 aa16.89■□□□□ 0.29
SH3TC1-206ENST00000502669 TFRCP02786 760 aaKnown RBP16.89■□□□□ 0.29
SH3TC1-206ENST00000502669 PNMA6AP0CW24 399 aaPredicted RBP16.89■□□□□ 0.29
SH3TC1-206ENST00000502669 BTDP43251 543 aa16.89■□□□□ 0.29
SH3TC1-206ENST00000502669 PDE4DQ08499 809 aa16.89■□□□□ 0.29
SH3TC1-206ENST00000502669 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.89■□□□□ 0.29
SH3TC1-206ENST00000502669 MYH3P11055 1940 aa16.88■□□□□ 0.29
SH3TC1-206ENST00000502669 ITGB4P16144 1822 aa16.88■□□□□ 0.29
SH3TC1-206ENST00000502669 FRMPD2Q68DX3 1309 aaPredicted RBP16.88■□□□□ 0.29
SH3TC1-206ENST00000502669 MPHOSPH10O00566 681 aaKnown RBP16.88■□□□□ 0.29
SH3TC1-206ENST00000502669 PARP1P09874 1014 aaKnown RBP16.88■□□□□ 0.29
SH3TC1-206ENST00000502669 GSTO1P78417 241 aa16.88■□□□□ 0.29
SH3TC1-206ENST00000502669 LUC7L2Q9Y383 392 aaKnown RBP16.88■□□□□ 0.29
SH3TC1-206ENST00000502669 SLIT2O94813 1529 aa16.88■□□□□ 0.29
SH3TC1-206ENST00000502669 SMCO2A6NFE2 343 aa16.88■□□□□ 0.29
SH3TC1-206ENST00000502669 CCDC93Q567U6 631 aa16.88■□□□□ 0.29
SH3TC1-206ENST00000502669 CSGALNACT2Q8N6G5 542 aa16.88■□□□□ 0.29
SH3TC1-206ENST00000502669 TMEM47Q9BQJ4 181 aa16.88■□□□□ 0.29
SH3TC1-206ENST00000502669 ZNHIT6Q9NWK9 470 aaKnown RBP16.88■□□□□ 0.29
SH3TC1-206ENST00000502669 BAZ2AQ9UIF9 1905 aaKnown RBP16.88■□□□□ 0.29
SH3TC1-206ENST00000502669 FANCGO15287 622 aa16.87■□□□□ 0.29
SH3TC1-206ENST00000502669 GYPCP04921 128 aa16.87■□□□□ 0.29
SH3TC1-206ENST00000502669 TRAPPC10P48553 1259 aa16.87■□□□□ 0.29
SH3TC1-206ENST00000502669 IL17AQ16552 155 aa16.87■□□□□ 0.29
SH3TC1-206ENST00000502669 ZNF658Q5TYW1 1059 aaPredicted RBP16.87■□□□□ 0.29
SH3TC1-206ENST00000502669 C12orf60Q5U649 245 aa16.87■□□□□ 0.29
SH3TC1-206ENST00000502669 TYW1BQ6NUM6 668 aa16.87■□□□□ 0.29
SH3TC1-206ENST00000502669 ZNF287Q9HBT7 754 aa16.87■□□□□ 0.29
SH3TC1-206ENST00000502669 GPCPD1Q9NPB8 672 aa16.87■□□□□ 0.29
SH3TC1-206ENST00000502669 KCND1Q9NSA2 647 aa16.87■□□□□ 0.29
SH3TC1-206ENST00000502669 RPS6KA4O75676 772 aa16.87■□□□□ 0.29
SH3TC1-206ENST00000502669 LONP1P36776 959 aaKnown RBP16.87■□□□□ 0.29
SH3TC1-206ENST00000502669 RCSD1Q6JBY9 416 aa16.87■□□□□ 0.29
SH3TC1-206ENST00000502669 CABP7Q86V35 215 aa16.87■□□□□ 0.29
SH3TC1-206ENST00000502669 CAGE1Q8TC20 777 aa16.87■□□□□ 0.29
SH3TC1-206ENST00000502669 PANX2Q96RD6 677 aa16.87■□□□□ 0.29
SH3TC1-206ENST00000502669 DISC1Q9NRI5 854 aa16.87■□□□□ 0.29
SH3TC1-206ENST00000502669 IL17RBQ9NRM6 502 aa16.87■□□□□ 0.29
SH3TC1-206ENST00000502669 C4AP0C0L4 1744 aa16.87■□□□□ 0.29
SH3TC1-206ENST00000502669 C4BP0C0L5 1744 aa16.87■□□□□ 0.29
SH3TC1-206ENST00000502669 NPY5RQ15761 445 aa16.87■□□□□ 0.29
SH3TC1-206ENST00000502669 TCP11X2Q5H9J9 407 aa16.87■□□□□ 0.29
SH3TC1-206ENST00000502669 FAM196AQ6ZSG2 479 aa16.87■□□□□ 0.29
SH3TC1-206ENST00000502669 DYMQ7RTS9 669 aa16.87■□□□□ 0.29
SH3TC1-206ENST00000502669 CAPZA3Q96KX2 299 aa16.87■□□□□ 0.29
SH3TC1-206ENST00000502669 PARD6BQ9BYG5 372 aa16.87■□□□□ 0.29
SH3TC1-206ENST00000502669 TANGO6Q9C0B7 1094 aa16.87■□□□□ 0.29
SH3TC1-206ENST00000502669 ZHX3Q9H4I2 956 aa16.87■□□□□ 0.29
SH3TC1-206ENST00000502669 MFSD14BQ5SR56 506 aa16.86■□□□□ 0.29
SH3TC1-206ENST00000502669 ELOA2Q8IYF1 753 aaPredicted RBP16.86■□□□□ 0.29
SH3TC1-206ENST00000502669 RRP36Q96EU6 259 aaKnown RBP16.86■□□□□ 0.29
SH3TC1-206ENST00000502669 ENC1O14682 589 aa16.86■□□□□ 0.29
SH3TC1-206ENST00000502669 GABPB1Q06547 395 aaPredicted RBP16.86■□□□□ 0.29
SH3TC1-206ENST00000502669 CYP26C1Q6V0L0 522 aa16.86■□□□□ 0.29
SH3TC1-206ENST00000502669 TMTC1Q8IUR5 882 aa16.86■□□□□ 0.29
SH3TC1-206ENST00000502669 LRRC47Q8N1G4 583 aaKnown RBP16.86■□□□□ 0.29
SH3TC1-206ENST00000502669 HPS3Q969F9 1004 aa16.86■□□□□ 0.29
SH3TC1-206ENST00000502669 C6orf50Q9HD87 102 aa16.86■□□□□ 0.29
SH3TC1-206ENST00000502669 RWDD2AQ9UIY3 292 aa16.86■□□□□ 0.29
SH3TC1-206ENST00000502669 TFR2Q9UP52 801 aa16.86■□□□□ 0.29
SH3TC1-206ENST00000502669 B4DLN1 442 aa16.86■□□□□ 0.29
SH3TC1-206ENST00000502669 TNNI2P48788 182 aa16.86■□□□□ 0.29
SH3TC1-206ENST00000502669 TBC1D8BQ0IIM8 1120 aa16.86■□□□□ 0.29
SH3TC1-206ENST00000502669 DRC1Q96MC2 740 aa16.86■□□□□ 0.29
SH3TC1-206ENST00000502669 CHP1Q99653 195 aa16.86■□□□□ 0.29
SH3TC1-206ENST00000502669 ZCCHC17Q9NP64 241 aaKnown RBP16.86■□□□□ 0.29
SH3TC1-206ENST00000502669 PAPPAQ13219 1627 aa16.86■□□□□ 0.29
SH3TC1-206ENST00000502669 MEX3CQ5U5Q3 659 aaKnown RBP16.85■□□□□ 0.29
SH3TC1-206ENST00000502669 DGKHQ86XP1 1220 aa16.85■□□□□ 0.29
SH3TC1-206ENST00000502669 MRFAP1Q9Y605 127 aa16.85■□□□□ 0.29
SH3TC1-206ENST00000502669 H2AFXP16104 143 aaPredicted RBP16.85■□□□□ 0.29
SH3TC1-206ENST00000502669 PLCG1P19174 1290 aa16.85■□□□□ 0.29
SH3TC1-206ENST00000502669 NONOQ15233 471 aaKnown RBP eCLIP16.85■□□□□ 0.29
SH3TC1-206ENST00000502669 CCDC96Q2M329 555 aa16.85■□□□□ 0.29
SH3TC1-206ENST00000502669 CALML4Q96GE6 196 aa16.85■□□□□ 0.29
SH3TC1-206ENST00000502669 MTRQ99707 1265 aa16.85■□□□□ 0.29
SH3TC1-206ENST00000502669 SH3RF1Q7Z6J0 888 aa16.84■□□□□ 0.29
SH3TC1-206ENST00000502669 CLEC10AQ8IUN9 316 aa16.84■□□□□ 0.29
SH3TC1-206ENST00000502669 GPR161Q8N6U8 529 aaKnown RBP16.84■□□□□ 0.29
SH3TC1-206ENST00000502669 SPATA20Q8TB22 786 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms