RNA–Protein interactions for RNA: ENST00000502443.1

USP46-203, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-203ENST00000502443 SEC23AQ15436 765 aa8.56□□□□□ -1.04
USP46-203ENST00000502443 TTBK2Q6IQ55 1244 aa8.56□□□□□ -1.04
USP46-203ENST00000502443 NCAPG2Q86XI2 1143 aa8.56□□□□□ -1.04
USP46-203ENST00000502443 CPXCR1Q8N123 301 aa8.56□□□□□ -1.04
USP46-203ENST00000502443 SH3TC2Q8TF17 1288 aa8.56□□□□□ -1.04
USP46-203ENST00000502443 SOCS4Q8WXH5 440 aa8.56□□□□□ -1.04
USP46-203ENST00000502443 NUDT12Q9BQG2 462 aa8.56□□□□□ -1.04
USP46-203ENST00000502443 MROH8Q9H579 483 aa8.56□□□□□ -1.04
USP46-203ENST00000502443 BIN2Q9UBW5 565 aaPredicted RBP8.56□□□□□ -1.04
USP46-203ENST00000502443 GJD2Q9UKL4 321 aa8.56□□□□□ -1.04
USP46-203ENST00000502443 ZNF214Q9UL59 606 aaPredicted RBP8.56□□□□□ -1.04
USP46-203ENST00000502443 PLXNB2O15031 1838 aa8.55□□□□□ -1.04
USP46-203ENST00000502443 SLC15A5A6NIM6 579 aa8.55□□□□□ -1.04
USP46-203ENST00000502443 PRC1O43663 620 aa8.55□□□□□ -1.04
USP46-203ENST00000502443 PLA2G6O60733 806 aa8.55□□□□□ -1.04
USP46-203ENST00000502443 SLC25A27O95847 323 aa8.55□□□□□ -1.04
USP46-203ENST00000502443 MYCP01106 439 aaPredicted RBP8.55□□□□□ -1.04
USP46-203ENST00000502443 FDX1P10109 184 aa8.55□□□□□ -1.04
USP46-203ENST00000502443 ELNP15502 786 aa8.55□□□□□ -1.04
USP46-203ENST00000502443 CYP2B6P20813 491 aa8.55□□□□□ -1.04
USP46-203ENST00000502443 PTPREP23469 700 aa8.55□□□□□ -1.04
USP46-203ENST00000502443 MCM5P33992 734 aa8.55□□□□□ -1.04
USP46-203ENST00000502443 SLC16A2P36021 539 aa8.55□□□□□ -1.04
USP46-203ENST00000502443 ANTXR2P58335 489 aa8.55□□□□□ -1.04
USP46-203ENST00000502443 SNAP25P60880 206 aa8.55□□□□□ -1.04
USP46-203ENST00000502443 ZNF543Q08ER8 600 aa8.55□□□□□ -1.04
USP46-203ENST00000502443 IRF5Q13568 498 aa8.55□□□□□ -1.04
USP46-203ENST00000502443 WTAPQ15007 396 aa8.55□□□□□ -1.04
USP46-203ENST00000502443 TMEM67Q5HYA8 995 aa8.55□□□□□ -1.04
USP46-203ENST00000502443 MORN1Q5T089 497 aa8.55□□□□□ -1.04
USP46-203ENST00000502443 GPATCH4Q5T3I0 446 aaKnown RBP8.55□□□□□ -1.04
USP46-203ENST00000502443 IFFO2Q5TF58 517 aa8.55□□□□□ -1.04
USP46-203ENST00000502443 SNRNP48Q6IEG0 339 aaKnown RBP8.55□□□□□ -1.04
USP46-203ENST00000502443 RIOX2Q8IUF8 465 aa8.55□□□□□ -1.04
USP46-203ENST00000502443 MB21D2Q8IYB1 491 aaPredicted RBP8.55□□□□□ -1.04
USP46-203ENST00000502443 SLAIN1Q8ND83 568 aa8.55□□□□□ -1.04
USP46-203ENST00000502443 SHCBP1Q8NEM2 672 aa8.55□□□□□ -1.04
USP46-203ENST00000502443 REPS2Q8NFH8 660 aa8.55□□□□□ -1.04
USP46-203ENST00000502443 ARMC5Q96C12 935 aa8.55□□□□□ -1.04
USP46-203ENST00000502443 TEX13BQ9BXU2 312 aa8.55□□□□□ -1.04
USP46-203ENST00000502443 SLC38A10Q9HBR0 1119 aa8.55□□□□□ -1.04
USP46-203ENST00000502443 RAVER2Q9HCJ3 691 aaKnown RBP8.55□□□□□ -1.04
USP46-203ENST00000502443 PRR12Q9ULL5 1215 aa8.55□□□□□ -1.04
USP46-203ENST00000502443 HTTP42858 3142 aa8.55□□□□□ -1.04
USP46-203ENST00000502443 CENPFP49454 3210 aa8.55□□□□□ -1.04
USP46-203ENST00000502443 ATP2A1O14983 1001 aa8.54□□□□□ -1.04
USP46-203ENST00000502443 STRNO43815 780 aa8.54□□□□□ -1.04
USP46-203ENST00000502443 PARP1P09874 1014 aaKnown RBP8.54□□□□□ -1.04
USP46-203ENST00000502443 GOLGA8HP0CJ92 632 aa8.54□□□□□ -1.04
USP46-203ENST00000502443 SNHG28P0DPA3 235 aa8.54□□□□□ -1.04
USP46-203ENST00000502443 FCER1AP12319 257 aa8.54□□□□□ -1.04
USP46-203ENST00000502443 ADORA2AP29274 412 aa8.54□□□□□ -1.04
USP46-203ENST00000502443 HSPA4P34932 840 aa8.54□□□□□ -1.04
USP46-203ENST00000502443 COPB2P35606 906 aa8.54□□□□□ -1.04
USP46-203ENST00000502443 RGS2P41220 211 aa8.54□□□□□ -1.04
USP46-203ENST00000502443 OAZ1P54368 228 aa8.54□□□□□ -1.04
USP46-203ENST00000502443 MAP2K5Q13163 448 aa8.54□□□□□ -1.04
USP46-203ENST00000502443 GRB14Q14449 540 aa8.54□□□□□ -1.04
USP46-203ENST00000502443 KRT32Q14532 448 aa8.54□□□□□ -1.04
USP46-203ENST00000502443 ADCK5Q3MIX3 580 aa8.54□□□□□ -1.04
USP46-203ENST00000502443 TSGA10IPQ3SY00 556 aa8.54□□□□□ -1.04
USP46-203ENST00000502443 ASPRV1Q53RT3 343 aa8.54□□□□□ -1.04
USP46-203ENST00000502443 SYDE2Q5VT97 1194 aa8.54□□□□□ -1.04
USP46-203ENST00000502443 CCDC174Q6PII3 467 aa8.54□□□□□ -1.04
USP46-203ENST00000502443 BTNL9Q6UXG8 535 aa8.54□□□□□ -1.04
USP46-203ENST00000502443 DPP9Q86TI2 863 aa8.54□□□□□ -1.04
USP46-203ENST00000502443 RASEFQ8IZ41 740 aa8.54□□□□□ -1.04
USP46-203ENST00000502443 IGDCC4Q8TDY8 1250 aa8.54□□□□□ -1.04
USP46-203ENST00000502443 PXYLP1Q8TE99 480 aa8.54□□□□□ -1.04
USP46-203ENST00000502443 USP6NLQ92738 828 aa8.54□□□□□ -1.04
USP46-203ENST00000502443 ZNF333Q96JL9 665 aa8.54□□□□□ -1.04
USP46-203ENST00000502443 NEK1Q96PY6 1258 aa8.54□□□□□ -1.04
USP46-203ENST00000502443 SENP2Q9HC62 589 aa8.54□□□□□ -1.04
USP46-203ENST00000502443 RIPK3Q9Y572 518 aa8.54□□□□□ -1.04
USP46-203ENST00000502443 ZNFX1Q9P2E3 1918 aaKnown RBP8.54□□□□□ -1.04
USP46-203ENST00000502443 XRCC5P13010 732 aaKnown RBP8.53□□□□□ -1.04
USP46-203ENST00000502443 SOX10P56693 466 aa8.53□□□□□ -1.04
USP46-203ENST00000502443 UBXN2AP68543 259 aa8.53□□□□□ -1.04
USP46-203ENST00000502443 COL9A3Q14050 684 aaPredicted RBP8.53□□□□□ -1.04
USP46-203ENST00000502443 KCTD2Q14681 263 aa8.53□□□□□ -1.04
USP46-203ENST00000502443 NFXL1Q6ZNB6 911 aa8.53□□□□□ -1.04
USP46-203ENST00000502443 CATIPQ7Z7H3 387 aa8.53□□□□□ -1.04
USP46-203ENST00000502443 ABRAQ8N0Z2 381 aa8.53□□□□□ -1.04
USP46-203ENST00000502443 TMTC2Q8N394 836 aa8.53□□□□□ -1.04
USP46-203ENST00000502443 TMEM87BQ96K49 555 aa8.53□□□□□ -1.04
USP46-203ENST00000502443 AGBL1Q96MI9 1066 aa8.53□□□□□ -1.04
USP46-203ENST00000502443 MMP19Q99542 508 aa8.53□□□□□ -1.04
USP46-203ENST00000502443 APBA2Q99767 749 aa8.53□□□□□ -1.04
USP46-203ENST00000502443 MTA3Q9BTC8 594 aa8.53□□□□□ -1.04
USP46-203ENST00000502443 USP26Q9BXU7 913 aa8.53□□□□□ -1.04
USP46-203ENST00000502443 LRRC2Q9BYS8 371 aa8.53□□□□□ -1.04
USP46-203ENST00000502443 UBA5Q9GZZ9 404 aa8.53□□□□□ -1.04
USP46-203ENST00000502443 CPVLQ9H3G5 476 aa8.53□□□□□ -1.04
USP46-203ENST00000502443 LY9Q9HBG7 655 aa8.53□□□□□ -1.04
USP46-203ENST00000502443 GPHNQ9NQX3 736 aaPredicted RBP8.53□□□□□ -1.04
USP46-203ENST00000502443 HOMER2Q9NSB8 354 aa8.53□□□□□ -1.04
USP46-203ENST00000502443 ZNF536O15090 1300 aa8.53□□□□□ -1.04
USP46-203ENST00000502443 CCDC69A6NI79 296 aa8.52□□□□□ -1.05
USP46-203ENST00000502443 KLRF2D3W0D1 207 aa8.52□□□□□ -1.05
USP46-203ENST00000502443 SH2B2O14492 632 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms