RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 ZBED4O75132 1171 aa18.19■□□□□ 0.5
CPNE1-228ENST00000498814 FMNL1O95466 1100 aaPredicted RBP18.19■□□□□ 0.5
CPNE1-228ENST00000498814 TROAPQ12815 778 aa18.19■□□□□ 0.5
CPNE1-228ENST00000498814 TMEM132BQ14DG7 1078 aa18.19■□□□□ 0.5
CPNE1-228ENST00000498814 ASPRV1Q53RT3 343 aa18.19■□□□□ 0.5
CPNE1-228ENST00000498814 TTBK2Q6IQ55 1244 aa18.19■□□□□ 0.5
CPNE1-228ENST00000498814 OTOP1Q7RTM1 612 aa18.19■□□□□ 0.5
CPNE1-228ENST00000498814 CATIPQ7Z7H3 387 aa18.19■□□□□ 0.5
CPNE1-228ENST00000498814 SGMS1Q86VZ5 419 aa18.19■□□□□ 0.5
CPNE1-228ENST00000498814 LRRC2Q9BYS8 371 aa18.19■□□□□ 0.5
CPNE1-228ENST00000498814 SPATC1LQ9H0A9 340 aa18.19■□□□□ 0.5
CPNE1-228ENST00000498814 SLC38A10Q9HBR0 1119 aa18.19■□□□□ 0.5
CPNE1-228ENST00000498814 PRR12Q9ULL5 1215 aa18.19■□□□□ 0.5
CPNE1-228ENST00000498814 TRIM17Q9Y577 477 aa18.19■□□□□ 0.5
CPNE1-228ENST00000498814 ATP2A1O14983 1001 aa18.18■□□□□ 0.5
CPNE1-228ENST00000498814 PARP1P09874 1014 aaKnown RBP18.18■□□□□ 0.5
CPNE1-228ENST00000498814 GOLGA8HP0CJ92 632 aa18.18■□□□□ 0.5
CPNE1-228ENST00000498814 CASTP20810 708 aaKnown RBP18.18■□□□□ 0.5
CPNE1-228ENST00000498814 RPS6KB1P23443 525 aa18.18■□□□□ 0.5
CPNE1-228ENST00000498814 HOXD10P28358 340 aa18.18■□□□□ 0.5
CPNE1-228ENST00000498814 MAPK4P31152 587 aa18.18■□□□□ 0.5
CPNE1-228ENST00000498814 PKN2Q16513 984 aaKnown RBP18.18■□□□□ 0.5
CPNE1-228ENST00000498814 COL13A1Q5TAT6 717 aaPredicted RBP18.18■□□□□ 0.5
CPNE1-228ENST00000498814 SYDE2Q5VT97 1194 aa18.18■□□□□ 0.5
CPNE1-228ENST00000498814 SHCBP1Q8NEM2 672 aa18.18■□□□□ 0.5
CPNE1-228ENST00000498814 IL17RAQ96F46 866 aa18.18■□□□□ 0.5
CPNE1-228ENST00000498814 TCEANC2Q96MN5 208 aa18.18■□□□□ 0.5
CPNE1-228ENST00000498814 MAP3K14Q99558 947 aa18.18■□□□□ 0.5
CPNE1-228ENST00000498814 MOV10L1Q9BXT6 1211 aaKnown RBP18.18■□□□□ 0.5
CPNE1-228ENST00000498814 PORCNQ9H237 461 aa18.18■□□□□ 0.5
CPNE1-228ENST00000498814 ZSWIM6Q9HCJ5 1215 aa18.18■□□□□ 0.5
CPNE1-228ENST00000498814 ZNF214Q9UL59 606 aaPredicted RBP18.18■□□□□ 0.5
CPNE1-228ENST00000498814 PLXNB2O15031 1838 aa18.17■□□□□ 0.5
CPNE1-228ENST00000498814 CCDC69A6NI79 296 aa18.17■□□□□ 0.5
CPNE1-228ENST00000498814 TNPO2O14787 897 aaKnown RBP18.17■□□□□ 0.5
CPNE1-228ENST00000498814 DDAH1O94760 285 aa18.17■□□□□ 0.5
CPNE1-228ENST00000498814 ECM2O94769 699 aaPredicted RBP18.17■□□□□ 0.5
CPNE1-228ENST00000498814 CPA1P15085 419 aa18.17■□□□□ 0.5
CPNE1-228ENST00000498814 SLC16A2P36021 539 aa18.17■□□□□ 0.5
CPNE1-228ENST00000498814 STAT3P40763 770 aa18.17■□□□□ 0.5
CPNE1-228ENST00000498814 OAZ1P54368 228 aa18.17■□□□□ 0.5
CPNE1-228ENST00000498814 PRMT2P55345 433 aa18.17■□□□□ 0.5
CPNE1-228ENST00000498814 PLS1Q14651 629 aa18.17■□□□□ 0.5
CPNE1-228ENST00000498814 GRM4Q14833 912 aa18.17■□□□□ 0.5
CPNE1-228ENST00000498814 NFXL1Q6ZNB6 911 aa18.17■□□□□ 0.5
CPNE1-228ENST00000498814 RUFY3Q7L099 469 aa18.17■□□□□ 0.5
CPNE1-228ENST00000498814 CCAR1Q8IX12 1150 aaKnown RBP18.17■□□□□ 0.5
CPNE1-228ENST00000498814 ZNF654Q8IZM8 581 aa18.17■□□□□ 0.5
CPNE1-228ENST00000498814 FBXL16Q8N461 479 aa18.17■□□□□ 0.5
CPNE1-228ENST00000498814 CTDP1Q9Y5B0 961 aaPredicted RBP18.17■□□□□ 0.5
CPNE1-228ENST00000498814 MYH6P13533 1939 aa18.17■□□□□ 0.5
CPNE1-228ENST00000498814 ZNFX1Q9P2E3 1918 aaKnown RBP18.16■□□□□ 0.5
CPNE1-228ENST00000498814 PALM3A6NDB9 673 aaPredicted RBP18.16■□□□□ 0.5
CPNE1-228ENST00000498814 SLC25A27O95847 323 aa18.16■□□□□ 0.5
CPNE1-228ENST00000498814 RIOX2Q8IUF8 465 aa18.16■□□□□ 0.5
CPNE1-228ENST00000498814 COA7Q96BR5 231 aa18.16■□□□□ 0.5
CPNE1-228ENST00000498814 TEX13BQ9BXU2 312 aa18.16■□□□□ 0.5
CPNE1-228ENST00000498814 RANBP17Q9H2T7 1088 aaKnown RBP18.16■□□□□ 0.5
CPNE1-228ENST00000498814 MROH8Q9H579 483 aa18.16■□□□□ 0.5
CPNE1-228ENST00000498814 SRRDQ9UH36 339 aa18.16■□□□□ 0.5
CPNE1-228ENST00000498814 MAD2L2Q9UI95 211 aa18.16■□□□□ 0.5
CPNE1-228ENST00000498814 SLC12A7Q9Y666 1083 aa18.16■□□□□ 0.5
CPNE1-228ENST00000498814 CYP46A1Q9Y6A2 500 aa18.16■□□□□ 0.5
CPNE1-228ENST00000498814 SMCHD1A6NHR9 2005 aa18.15■□□□□ 0.5
CPNE1-228ENST00000498814 KLRF2D3W0D1 207 aa18.15■□□□□ 0.5
CPNE1-228ENST00000498814 CALM1P0DP23 149 aa18.15■□□□□ 0.5
CPNE1-228ENST00000498814 CALM2P0DP24 149 aa18.15■□□□□ 0.5
CPNE1-228ENST00000498814 CALM3P0DP25 149 aa18.15■□□□□ 0.5
CPNE1-228ENST00000498814 ERCC3P19447 782 aa18.15■□□□□ 0.5
CPNE1-228ENST00000498814 COPB2P35606 906 aa18.15■□□□□ 0.5
CPNE1-228ENST00000498814 Q6ZUG5 572 aa18.15■□□□□ 0.5
CPNE1-228ENST00000498814 GPR142Q7Z601 462 aa18.15■□□□□ 0.5
CPNE1-228ENST00000498814 PLEKHH3Q7Z736 793 aa18.15■□□□□ 0.5
CPNE1-228ENST00000498814 STAG2Q8N3U4 1231 aa18.15■□□□□ 0.5
CPNE1-228ENST00000498814 AGXT2Q9BYV1 514 aa18.15■□□□□ 0.5
CPNE1-228ENST00000498814 PTPN22Q9Y2R2 807 aa18.15■□□□□ 0.5
CPNE1-228ENST00000498814 FGD1P98174 961 aa18.14■□□□□ 0.49
CPNE1-228ENST00000498814 SNRNP48Q6IEG0 339 aaKnown RBP18.14■□□□□ 0.49
CPNE1-228ENST00000498814 FBXO46Q6PJ61 603 aaPredicted RBP18.14■□□□□ 0.49
CPNE1-228ENST00000498814 NCAPG2Q86XI2 1143 aa18.14■□□□□ 0.49
CPNE1-228ENST00000498814 CPXCR1Q8N123 301 aa18.14■□□□□ 0.49
CPNE1-228ENST00000498814 NUP133Q8WUM0 1156 aa18.14■□□□□ 0.49
CPNE1-228ENST00000498814 UBA5Q9GZZ9 404 aa18.14■□□□□ 0.49
CPNE1-228ENST00000498814 RAVER2Q9HCJ3 691 aaKnown RBP18.14■□□□□ 0.49
CPNE1-228ENST00000498814 GJD2Q9UKL4 321 aa18.14■□□□□ 0.49
CPNE1-228ENST00000498814 ZNF536O15090 1300 aa18.14■□□□□ 0.49
CPNE1-228ENST00000498814 BAZ2BQ9UIF8 2168 aaKnown RBP18.14■□□□□ 0.49
CPNE1-228ENST00000498814 STRNO43815 780 aa18.13■□□□□ 0.49
CPNE1-228ENST00000498814 KIF5BP33176 963 aa18.13■□□□□ 0.49
CPNE1-228ENST00000498814 PRKCZQ05513 592 aa18.13■□□□□ 0.49
CPNE1-228ENST00000498814 APOA5Q6Q788 366 aa18.13■□□□□ 0.49
CPNE1-228ENST00000498814 SYNE3Q6ZMZ3 975 aa18.13■□□□□ 0.49
CPNE1-228ENST00000498814 ADGRF4Q8IZF3 695 aa18.13■□□□□ 0.49
CPNE1-228ENST00000498814 CTCFLQ8NI51 663 aaPredicted RBP18.13■□□□□ 0.49
CPNE1-228ENST00000498814 MYL10Q9BUA6 226 aa18.13■□□□□ 0.49
CPNE1-228ENST00000498814 MCOLN1Q9GZU1 580 aa18.13■□□□□ 0.49
CPNE1-228ENST00000498814 CPVLQ9H3G5 476 aa18.13■□□□□ 0.49
CPNE1-228ENST00000498814 CWC22Q9HCG8 908 aaKnown RBP18.13■□□□□ 0.49
CPNE1-228ENST00000498814 BRPF3Q9ULD4 1205 aa18.13■□□□□ 0.49
CPNE1-228ENST00000498814 ZNF236Q9UL36 1845 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms