RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 FAM227BQ96M60 508 aa4.56□□□□□ -1.68
CLTC-209ENST00000498711 GPR108Q9NPR9 543 aa4.56□□□□□ -1.68
CLTC-209ENST00000498711 DDX21Q9NR30 783 aaKnown RBP eCLIP4.56□□□□□ -1.68
CLTC-209ENST00000498711 MRPL42Q9Y6G3 142 aaKnown RBP4.56□□□□□ -1.68
CLTC-209ENST00000498711 PALLDQ8WX93 1383 aa4.56□□□□□ -1.68
CLTC-209ENST00000498711 BTAF1O14981 1849 aa4.56□□□□□ -1.68
CLTC-209ENST00000498711 NEDD4P46934 1319 aa4.56□□□□□ -1.68
CLTC-209ENST00000498711 SH3TC1Q8TE82 1336 aa4.56□□□□□ -1.68
CLTC-209ENST00000498711 A0A0D9SFI3 127 aa4.56□□□□□ -1.68
CLTC-209ENST00000498711 GRM8O00222 908 aa4.56□□□□□ -1.68
CLTC-209ENST00000498711 POLR3DP05423 398 aaPredicted RBP4.56□□□□□ -1.68
CLTC-209ENST00000498711 IGKV5-2P06315 115 aa4.56□□□□□ -1.68
CLTC-209ENST00000498711 XRCC5P13010 732 aaKnown RBP4.56□□□□□ -1.68
CLTC-209ENST00000498711 HSD3B2P26439 372 aa4.56□□□□□ -1.68
CLTC-209ENST00000498711 BAG6P46379 1132 aa4.56□□□□□ -1.68
CLTC-209ENST00000498711 RNF144AP50876 292 aaPredicted RBP4.56□□□□□ -1.68
CLTC-209ENST00000498711 NFX1Q12986 1120 aaKnown RBP4.56□□□□□ -1.68
CLTC-209ENST00000498711 PLEKHO1Q53GL0 409 aaPredicted RBP4.56□□□□□ -1.68
CLTC-209ENST00000498711 NOL8Q76FK4 1167 aaKnown RBP4.56□□□□□ -1.68
CLTC-209ENST00000498711 CCDC186Q7Z3E2 898 aa4.56□□□□□ -1.68
CLTC-209ENST00000498711 LRRC8AQ8IWT6 810 aa4.56□□□□□ -1.68
CLTC-209ENST00000498711 DHX40Q8IX18 779 aaKnown RBP4.56□□□□□ -1.68
CLTC-209ENST00000498711 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.56□□□□□ -1.68
CLTC-209ENST00000498711 CACTINQ8WUQ7 758 aaKnown RBP4.56□□□□□ -1.68
CLTC-209ENST00000498711 KLRG1Q96E93 195 aa4.56□□□□□ -1.68
CLTC-209ENST00000498711 RSRP1Q9BUV0 290 aa4.56□□□□□ -1.68
CLTC-209ENST00000498711 CHRDQ9H2X0 955 aa4.56□□□□□ -1.68
CLTC-209ENST00000498711 ZFAND3Q9H8U3 227 aa4.56□□□□□ -1.68
CLTC-209ENST00000498711 ZNF408Q9H9D4 720 aa4.56□□□□□ -1.68
CLTC-209ENST00000498711 MAP3K2Q9Y2U5 619 aa4.56□□□□□ -1.68
CLTC-209ENST00000498711 FAM237AA0A1B0GTK4 181 aa4.55□□□□□ -1.68
CLTC-209ENST00000498711 A0A1W2PQ27 194 aa4.55□□□□□ -1.68
CLTC-209ENST00000498711 A0A1W2PQ64 194 aa4.55□□□□□ -1.68
CLTC-209ENST00000498711 A0A1W2PQD8 194 aa4.55□□□□□ -1.68
CLTC-209ENST00000498711 EREGO14944 169 aa4.55□□□□□ -1.68
CLTC-209ENST00000498711 CTDNEP1O95476 244 aa4.55□□□□□ -1.68
CLTC-209ENST00000498711 IFIT2P09913 472 aaKnown RBP4.55□□□□□ -1.68
CLTC-209ENST00000498711 WDR4P57081 412 aaKnown RBP4.55□□□□□ -1.68
CLTC-209ENST00000498711 CCZ1BP86790 482 aa4.55□□□□□ -1.68
CLTC-209ENST00000498711 CCZ1P86791 482 aaPredicted RBP4.55□□□□□ -1.68
CLTC-209ENST00000498711 ANO6Q4KMQ2 910 aa4.55□□□□□ -1.68
CLTC-209ENST00000498711 BLOC1S2Q6QNY1 142 aa4.55□□□□□ -1.68
CLTC-209ENST00000498711 CREBRFQ8IUR6 639 aa4.55□□□□□ -1.68
CLTC-209ENST00000498711 CCDC144CPQ8IYA2 1237 aa4.55□□□□□ -1.68
CLTC-209ENST00000498711 NECAB1Q8N987 351 aa4.55□□□□□ -1.68
CLTC-209ENST00000498711 MKL1Q969V6 931 aa4.55□□□□□ -1.68
CLTC-209ENST00000498711 PMEPA1Q969W9 287 aa4.55□□□□□ -1.68
CLTC-209ENST00000498711 HAUS7Q99871 368 aa4.55□□□□□ -1.68
CLTC-209ENST00000498711 TNMDQ9H2S6 317 aa4.55□□□□□ -1.68
CLTC-209ENST00000498711 L2HGDHQ9H9P8 463 aa4.55□□□□□ -1.68
CLTC-209ENST00000498711 PRDM11Q9NQV5 511 aa4.55□□□□□ -1.68
CLTC-209ENST00000498711 DACT1Q9NYF0 836 aa4.55□□□□□ -1.68
CLTC-209ENST00000498711 CGNQ9P2M7 1197 aaKnown RBP4.55□□□□□ -1.68
CLTC-209ENST00000498711 IMPACTQ9P2X3 320 aa4.55□□□□□ -1.68
CLTC-209ENST00000498711 TAF6LQ9Y6J9 622 aa4.55□□□□□ -1.68
CLTC-209ENST00000498711 LAMB4A4D0S4 1761 aa4.55□□□□□ -1.68
CLTC-209ENST00000498711 ZNF609O15014 1411 aa4.55□□□□□ -1.68
CLTC-209ENST00000498711 BTBD11A6QL63 1104 aa4.55□□□□□ -1.68
CLTC-209ENST00000498711 SLFN14P0C7P3 912 aa4.55□□□□□ -1.68
CLTC-209ENST00000498711 DHX8Q14562 1220 aaKnown RBP4.55□□□□□ -1.68
CLTC-209ENST00000498711 CCDC85BQ15834 202 aaPredicted RBP4.55□□□□□ -1.68
CLTC-209ENST00000498711 PROSER3Q2NL68 480 aa4.55□□□□□ -1.68
CLTC-209ENST00000498711 LUZP1Q86V48 1076 aa4.55□□□□□ -1.68
CLTC-209ENST00000498711 ELOA2Q8IYF1 753 aaPredicted RBP4.55□□□□□ -1.68
CLTC-209ENST00000498711 DSCC1Q9BVC3 393 aa4.55□□□□□ -1.68
CLTC-209ENST00000498711 ABI2Q9NYB9 513 aaPredicted RBP4.55□□□□□ -1.68
CLTC-209ENST00000498711 NRBP1Q9UHY1 535 aa4.55□□□□□ -1.68
CLTC-209ENST00000498711 STRIP2Q9ULQ0 834 aa4.55□□□□□ -1.68
CLTC-209ENST00000498711 TJP1Q07157 1748 aa4.54□□□□□ -1.68
CLTC-209ENST00000498711 NEURL1BA8MQ27 555 aa4.54□□□□□ -1.68
CLTC-209ENST00000498711 SPATA31C2B4DYI2 1134 aa4.54□□□□□ -1.68
CLTC-209ENST00000498711 ADAMTS2O95450 1211 aa4.54□□□□□ -1.68
CLTC-209ENST00000498711 GCP02774 474 aa4.54□□□□□ -1.68
CLTC-209ENST00000498711 ATP4AP20648 1035 aa4.54□□□□□ -1.68
CLTC-209ENST00000498711 SLC19A1P41440 591 aa4.54□□□□□ -1.68
CLTC-209ENST00000498711 PHKA2P46019 1235 aa4.54□□□□□ -1.68
CLTC-209ENST00000498711 NUTM2GQ5VZR2 741 aa4.54□□□□□ -1.68
CLTC-209ENST00000498711 ZNF589Q86UQ0 364 aaPredicted RBP4.54□□□□□ -1.68
CLTC-209ENST00000498711 AACSQ86V21 672 aa4.54□□□□□ -1.68
CLTC-209ENST00000498711 RELL1Q8IUW5 271 aa4.54□□□□□ -1.68
CLTC-209ENST00000498711 C1orf127Q8N9H9 656 aa4.54□□□□□ -1.68
CLTC-209ENST00000498711 NSUN7Q8NE18 718 aaKnown RBP4.54□□□□□ -1.68
CLTC-209ENST00000498711 ZNF274Q96GC6 653 aaPredicted RBP4.54□□□□□ -1.68
CLTC-209ENST00000498711 METTL22Q9BUU2 404 aaPredicted RBP4.54□□□□□ -1.68
CLTC-209ENST00000498711 UBXN6Q9BZV1 441 aa4.54□□□□□ -1.68
CLTC-209ENST00000498711 BICC1Q9H694 974 aaKnown RBP4.54□□□□□ -1.68
CLTC-209ENST00000498711 HELLSQ9NRZ9 838 aa4.54□□□□□ -1.68
CLTC-209ENST00000498711 ADAMTS1Q9UHI8 967 aa4.54□□□□□ -1.68
CLTC-209ENST00000498711 CFAP45Q9UL16 551 aa4.54□□□□□ -1.68
CLTC-209ENST00000498711 PA2G4Q9UQ80 394 aaKnown RBP4.54□□□□□ -1.68
CLTC-209ENST00000498711 ARFGEF2Q9Y6D5 1785 aa4.54□□□□□ -1.68
CLTC-209ENST00000498711 WDR19Q8NEZ3 1342 aa4.54□□□□□ -1.68
CLTC-209ENST00000498711 KIF2AO00139 706 aaPredicted RBP4.54□□□□□ -1.68
CLTC-209ENST00000498711 PLSCR1O15162 318 aa4.54□□□□□ -1.68
CLTC-209ENST00000498711 XYLBO75191 536 aa4.54□□□□□ -1.68
CLTC-209ENST00000498711 TIMP2P16035 220 aa4.54□□□□□ -1.68
CLTC-209ENST00000498711 VEGFBP49765 207 aa4.54□□□□□ -1.68
CLTC-209ENST00000498711 SCRN1Q12765 414 aa4.54□□□□□ -1.68
CLTC-209ENST00000498711 G3BP1Q13283 466 aaKnown RBP eCLIP4.54□□□□□ -1.685e-7■□□□□ 9.9
CLTC-209ENST00000498711 PTPROQ16827 1216 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms